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The map label for this gene is rsgA

Identifier: 54020105

GI number: 54020105

Start: 256520

End: 257377

Strand: Direct

Name: rsgA

Synonym: mhp230

Alternate gene names: 54020105

Gene position: 256520-257377 (Clockwise)

Preceding gene: 54020104

Following gene: 54020106

Centisome position: 28.73

GC content: 27.97

Gene sequence:

>858_bases
ATGAAAGGGCAAGTTGTTCGAATTATTGCCGGTTTTTATGATGTTGTCGATCTTAAAAACCGAAAATTATACCCGCTTTT
AAGAGGTTCTGGTCTTCTTCGGTTGAATGAAACATCGCCAATAGTTGGTGACTTTGTTGATTTTGAAGAAAAAGGCTTTA
TTAAAAAAATTTATGAAAGAAAAAATCAGCTAATTCGTCCAAAAGTAGCCAACATTGATCAAGCTTTAGTTTTTATTTCG
ATTAGAGAACCTAATTTTTCAAGCTTATTATTAGATAAATTTTTATTGGTAATTGAAGCAAAAAATATTCCTGTAATTTT
ATTAGTTACTAAAATTGATCTTGATTCTAATTTTGAAAATTTATTACTTGATTATCAAAAAATGAATTATAACATTTTTT
TTATTAATAATAAAAAAAATGAAATTCCTGTAGAATTAAAAGCCGAATTAGAAAAAAAACTTAACTTTGTTATCGGTCAA
ACCGGGGTCGGAAAAACCAGTTTTATTAATAATTTTTTAGATAAAAAATTTGCTATTCAAGAGATTTCCCAGACACTAAA
CCGTGGAAAGCATACAACTAGAGTCGTCCAAATTATTGAAAAAGAAAATTTTCGGATAATTGATAGCCCCGGTTTTTCCT
CGTTTTCATACAGCGAGATATCCAAAAATGAAATTCGCAATGCTTTTAAAATATTTAAAAAATTTTCATCAGACTGCAAA
TTCCGTTCCTGCTTTCATTTTCAGGAGAAAACTGATCAATGCGGCATTAAAAGGGCGCTAAAAGATGGAAAAATACCAGA
AAATCGTTATAAAAATTATCTTTATTTTTTAGGAAAATATGAAAAGAAAAATTATTAG

Upstream 100 bases:

>100_bases
AATTAAAAATTTGTTCAAATTTCAAGTGGTTAATGACAATTTAGAAGAATGTGTTGCCCAAATAGAAAAAATTATAAGTA
AAGAGATCCAAAAAACTTAG

Downstream 100 bases:

>100_bases
CCCCTCGCTTTTGAATATAAAAAAATCTAGTCGGCTAAAATCAACAAGAATTTTTTTGAATCTTGGCATAAAATGATTTC
ACTTTGATTTTATGGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKGQVVRIIAGFYDVVDLKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYERKNQLIRPKVANIDQALVFIS
IREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQ
TGVGKTSFINNFLDKKFAIQEISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY

Sequences:

>Translated_285_residues
MKGQVVRIIAGFYDVVDLKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYERKNQLIRPKVANIDQALVFIS
IREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQ
TGVGKTSFINNFLDKKFAIQEISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY
>Mature_285_residues
MKGQVVRIIAGFYDVVDLKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYERKNQLIRPKVANIDQALVFIS
IREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQ
TGVGKTSFINNFLDKKFAIQEISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=243, Percent_Identity=30.0411522633745, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_MYCH2 (Q601H2)

Other databases:

- EMBL:   AE017332
- RefSeq:   YP_115743.1
- HSSP:   O34530
- ProteinModelPortal:   Q601H2
- SMR:   Q601H2
- STRING:   Q601H2
- GeneID:   3105768
- GenomeReviews:   AE017332_GR
- KEGG:   mhy:mhp230
- eggNOG:   COG1162
- HOGENOM:   HBG652450
- OMA:   IAGFYDV
- BioCyc:   MHYO295358:MHP230-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR000038
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR18884
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 33304; Mature: 33304

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGQVVRIIAGFYDVVDLKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYER
CCCCEEEHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHH
KNQLIRPKVANIDQALVFISIREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFEN
HHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCHHH
LLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQTGVGKTSFINNFLDKKFAIQ
HHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
EISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
HHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCC
>Mature Secondary Structure
MKGQVVRIIAGFYDVVDLKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYER
CCCCEEEHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHH
KNQLIRPKVANIDQALVFISIREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFEN
HHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCHHH
LLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQTGVGKTSFINNFLDKKFAIQ
HHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
EISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
HHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA