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The map label for this gene is 52841340

Identifier: 52841340

GI number: 52841340

Start: 1209726

End: 1211000

Strand: Reverse

Name: 52841340

Synonym: lpg1106

Alternate gene names: NA

Gene position: 1211000-1209726 (Counterclockwise)

Preceding gene: 52841341

Following gene: 52841338

Centisome position: 35.64

GC content: 37.49

Gene sequence:

>1275_bases
ATGCGAAATAATAAAATGGGAGAAAAGATTCCAAGTTTTTTTCATCCTGATAATAAGGCCGCCTCACATCAAATATTGGT
AGACGACCCGTTAATCATTAAAGATAGCGAATTGTTAGACCTGTTAAACGCATCAATTGAAAAAGACGAGAAATATCACC
TCCTAATATCCTGCATTCGCAGTCACAGTCCCAAATATTTAAATCAAAGAATTATGGTTAAAAGCCATATAACAATCGAA
GGTGATGAGCGTACCCCCCCTCACTGGACACCTTTAGCAACAAAAAGAGAATACGGTTATCCAACCGATGGGGATCAAAA
TAACGAATTGACAACAACACTGGCAAATATCATTGCTACCAATGAATTAAATTTTTCTTCTGCTCAAATGGTTGCCTTGT
TTAGAGAGTTAATGATAAAGGGAGTTGATTTTACCGCCATGGATCAATCCCCCTACCTCAATTTAATACATCCAAAATCT
GGCAACAACCCTCTCAAAAGCTTGATAGCAGCCAGTTTGGGGGATCCTGAAATTATCCACTTACTGCATGACTTCATGAG
TTATATTGAAAATATAGTTCCTCGCGATAAACAATTATTGATTATCAATAATCAAGATAATTTTGAATTCGAGGCGATGC
AGCCGGCTGAATTTTTATTAAGGCTAGGCCATGAAGATTTGGCTTTACGCTTATACAGAATGGGAGCTCAACCGACTGTA
CAAGCATTCCGACTGGCTTGCTCCAGTTATGGCACCACTATTTACTACGAAGAAGCAATGGAATGCATTCAATTCATGAT
GAATTCTGTTGAGTTGAGTGAAACGGATTTAGTTGAAGGAAAAAATTCCCTGCAAAAAGCAAGTCCGGGACAATACAACG
AGATGCTGACAAGAATATTACGTTCCCTGCAGGAGGATTCGAAACTTGATACTGGACATTCTTCTCTCTATGAAATGATA
CAGAAAGACTACATAGAAAATTATCAGGATAAGAGGTTCATTTCATTTCGTGATTTTTGTCAGAAAGAAGCGAAAATTGA
TCATCCGCTGATTCAAAAATATGCTCTTTTACGCATCAAGCAAGAAAACGTAGGTAATGGTTATTTCTCAGATTACTACC
GCACAGAATCCAGACATTTGTCTGAGAATAAATGGGCTTTCCTCAATAAGAATCAAAGAGCCAGTCAATTGCTGATAAAT
CTCATTAATGCAATTGACCTTGGATTAATTGACATGGAACTTGGATCATTAAGTATAACCTCGGCCAAACTATAA

Upstream 100 bases:

>100_bases
GAATAAAAACACAGTTGTTGATTGTTACAAACAAACATGGGTTCGAAGCTTTTGTTACATTAGCTGTCGCTTTTAAATTT
TTTGAAAGAGGTTCTTAACT

Downstream 100 bases:

>100_bases
TCTTAGGAACATAAGGCAAGTTCAGCTCATTTCTATTCCTACATTGATTTGAGCTCAATGAACTCCATAGGCTAACTTGC
TGGAAAAACAAAGGCAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRNNKMGEKIPSFFHPDNKAASHQILVDDPLIIKDSELLDLLNASIEKDEKYHLLISCIRSHSPKYLNQRIMVKSHITIE
GDERTPPHWTPLATKREYGYPTDGDQNNELTTTLANIIATNELNFSSAQMVALFRELMIKGVDFTAMDQSPYLNLIHPKS
GNNPLKSLIAASLGDPEIIHLLHDFMSYIENIVPRDKQLLIINNQDNFEFEAMQPAEFLLRLGHEDLALRLYRMGAQPTV
QAFRLACSSYGTTIYYEEAMECIQFMMNSVELSETDLVEGKNSLQKASPGQYNEMLTRILRSLQEDSKLDTGHSSLYEMI
QKDYIENYQDKRFISFRDFCQKEAKIDHPLIQKYALLRIKQENVGNGYFSDYYRTESRHLSENKWAFLNKNQRASQLLIN
LINAIDLGLIDMELGSLSITSAKL

Sequences:

>Translated_424_residues
MRNNKMGEKIPSFFHPDNKAASHQILVDDPLIIKDSELLDLLNASIEKDEKYHLLISCIRSHSPKYLNQRIMVKSHITIE
GDERTPPHWTPLATKREYGYPTDGDQNNELTTTLANIIATNELNFSSAQMVALFRELMIKGVDFTAMDQSPYLNLIHPKS
GNNPLKSLIAASLGDPEIIHLLHDFMSYIENIVPRDKQLLIINNQDNFEFEAMQPAEFLLRLGHEDLALRLYRMGAQPTV
QAFRLACSSYGTTIYYEEAMECIQFMMNSVELSETDLVEGKNSLQKASPGQYNEMLTRILRSLQEDSKLDTGHSSLYEMI
QKDYIENYQDKRFISFRDFCQKEAKIDHPLIQKYALLRIKQENVGNGYFSDYYRTESRHLSENKWAFLNKNQRASQLLIN
LINAIDLGLIDMELGSLSITSAKL
>Mature_424_residues
MRNNKMGEKIPSFFHPDNKAASHQILVDDPLIIKDSELLDLLNASIEKDEKYHLLISCIRSHSPKYLNQRIMVKSHITIE
GDERTPPHWTPLATKREYGYPTDGDQNNELTTTLANIIATNELNFSSAQMVALFRELMIKGVDFTAMDQSPYLNLIHPKS
GNNPLKSLIAASLGDPEIIHLLHDFMSYIENIVPRDKQLLIINNQDNFEFEAMQPAEFLLRLGHEDLALRLYRMGAQPTV
QAFRLACSSYGTTIYYEEAMECIQFMMNSVELSETDLVEGKNSLQKASPGQYNEMLTRILRSLQEDSKLDTGHSSLYEMI
QKDYIENYQDKRFISFRDFCQKEAKIDHPLIQKYALLRIKQENVGNGYFSDYYRTESRHLSENKWAFLNKNQRASQLLIN
LINAIDLGLIDMELGSLSITSAKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48727; Mature: 48727

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNKMGEKIPSFFHPDNKAASHQILVDDPLIIKDSELLDLLNASIEKDEKYHLLISCIR
CCCCCCHHHCCHHCCCCCCCCCCEEEECCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHH
SHSPKYLNQRIMVKSHITIEGDERTPPHWTPLATKREYGYPTDGDQNNELTTTLANIIAT
HCCCHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NELNFSSAQMVALFRELMIKGVDFTAMDQSPYLNLIHPKSGNNPLKSLIAASLGDPEIIH
CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHH
LLHDFMSYIENIVPRDKQLLIINNQDNFEFEAMQPAEFLLRLGHEDLALRLYRMGAQPTV
HHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCCHHH
QAFRLACSSYGTTIYYEEAMECIQFMMNSVELSETDLVEGKNSLQKASPGQYNEMLTRIL
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHH
RSLQEDSKLDTGHSSLYEMIQKDYIENYQDKRFISFRDFCQKEAKIDHPLIQKYALLRIK
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEE
QENVGNGYFSDYYRTESRHLSENKWAFLNKNQRASQLLINLINAIDLGLIDMELGSLSIT
CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCEEEC
SAKL
CCCC
>Mature Secondary Structure
MRNNKMGEKIPSFFHPDNKAASHQILVDDPLIIKDSELLDLLNASIEKDEKYHLLISCIR
CCCCCCHHHCCHHCCCCCCCCCCEEEECCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHH
SHSPKYLNQRIMVKSHITIEGDERTPPHWTPLATKREYGYPTDGDQNNELTTTLANIIAT
HCCCHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
NELNFSSAQMVALFRELMIKGVDFTAMDQSPYLNLIHPKSGNNPLKSLIAASLGDPEIIH
CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHH
LLHDFMSYIENIVPRDKQLLIINNQDNFEFEAMQPAEFLLRLGHEDLALRLYRMGAQPTV
HHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCCHHH
QAFRLACSSYGTTIYYEEAMECIQFMMNSVELSETDLVEGKNSLQKASPGQYNEMLTRIL
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHH
RSLQEDSKLDTGHSSLYEMIQKDYIENYQDKRFISFRDFCQKEAKIDHPLIQKYALLRIK
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEE
QENVGNGYFSDYYRTESRHLSENKWAFLNKNQRASQLLINLINAIDLGLIDMELGSLSIT
CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCEEEC
SAKL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA