Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
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Accession | NC_002942 |
Length | 3,397,754 |
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The map label for this gene is 52841338
Identifier: 52841338
GI number: 52841338
Start: 1207933
End: 1208925
Strand: Reverse
Name: 52841338
Synonym: lpg1104
Alternate gene names: NA
Gene position: 1208925-1207933 (Counterclockwise)
Preceding gene: 52841340
Following gene: 52841336
Centisome position: 35.58
GC content: 35.15
Gene sequence:
>993_bases GTGAATCAAAAGCAAATAAAAAATGAACTCGCCTTAAAATGGGCTCTTGAGCATCTGGCATTAAACGATGAATTTAAAAT CATTGATCAACAGAAAATTATTGAAACCGCTTATTCAACAGTGCATAGAATCACCTCTTCCGAAAGCAACGTTTATTATC TGAAGCAAACACCGGAAATGTTGTACCTGGAACCCCAAACATTAACCTATATTAAGGAACAACGATGTCACAACATTCCC CAAATCATTGCAGAAAATAAACACTTAAATTGCTTTTTGATGCTGTCTTGTGGCGATGAAACTTTACGGAATCTGTTTAA AGAAAATATTGATTTGGAAATGCTTAAAGCAGGTATTCTTAATTACACTAAAATTCAACGGTTAGTAGAGAATCAACTCC CACAACTTATGGAATTGGGTCTTCCTGATTGGCGGCTTGAAAAATTTTCATCACTATATGACCAACTGATACAACAAGAA GAGCTTTTATCAAGTGATGGACTATCAAAAAATGAGATTACCCTCCTGAACAAAGCACACGAAATTTGCTTTAATTTATG TGAATCACTCTCCAAATACCAAATTCCAGAAACAATTAATCATTGTGATTTTCATGAAAATAACATGATTCTCAATCAAA AGACGGGAAATGTAAGCATCATTGACTGGGGAGAAACCGTTATCACTCATCCATTTTTTTCTCTGAATGGCTGTTTGTGG AACATAACTTTCTTTTACCCAATAAAACAGTCCGACAAAATATATGAAATATTGCAACGGCAATGTATTACTCCTTGGTT GGGCCTGCATGACGAAACTGATTTATTAAATGCGCTAAAAATTGCTAACCAACTCAATGGGGTTTTTGCTGCATTAAGTT ATAAGCGAATTTATGACGCAACTATGGATCAATCTCAAACAGTTCAACAAGAACACCCTGGTTCTATAGCCGGCTGCCTA AGATCATTCATAAACCATTTTCATTTAGCTTGA
Upstream 100 bases:
>100_bases ATTAATATTCATACCCAAAGCAAAAGACAGGCATGATGTTTGGACTTAAACTATTTTATACATTAAATTCATATTAAAGA TTATTAGTCATGAGCAAACT
Downstream 100 bases:
>100_bases CCGCTACATCAAAACTGTGATTGCTGAGTTTCATAAAATGACATTATTTATTCATTGCTTCTTGACGCTCAAATTGTTTA AAAAAATCCACCTGTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNQKQIKNELALKWALEHLALNDEFKIIDQQKIIETAYSTVHRITSSESNVYYLKQTPEMLYLEPQTLTYIKEQRCHNIP QIIAENKHLNCFLMLSCGDETLRNLFKENIDLEMLKAGILNYTKIQRLVENQLPQLMELGLPDWRLEKFSSLYDQLIQQE ELLSSDGLSKNEITLLNKAHEICFNLCESLSKYQIPETINHCDFHENNMILNQKTGNVSIIDWGETVITHPFFSLNGCLW NITFFYPIKQSDKIYEILQRQCITPWLGLHDETDLLNALKIANQLNGVFAALSYKRIYDATMDQSQTVQQEHPGSIAGCL RSFINHFHLA
Sequences:
>Translated_330_residues MNQKQIKNELALKWALEHLALNDEFKIIDQQKIIETAYSTVHRITSSESNVYYLKQTPEMLYLEPQTLTYIKEQRCHNIP QIIAENKHLNCFLMLSCGDETLRNLFKENIDLEMLKAGILNYTKIQRLVENQLPQLMELGLPDWRLEKFSSLYDQLIQQE ELLSSDGLSKNEITLLNKAHEICFNLCESLSKYQIPETINHCDFHENNMILNQKTGNVSIIDWGETVITHPFFSLNGCLW NITFFYPIKQSDKIYEILQRQCITPWLGLHDETDLLNALKIANQLNGVFAALSYKRIYDATMDQSQTVQQEHPGSIAGCL RSFINHFHLA >Mature_330_residues MNQKQIKNELALKWALEHLALNDEFKIIDQQKIIETAYSTVHRITSSESNVYYLKQTPEMLYLEPQTLTYIKEQRCHNIP QIIAENKHLNCFLMLSCGDETLRNLFKENIDLEMLKAGILNYTKIQRLVENQLPQLMELGLPDWRLEKFSSLYDQLIQQE ELLSSDGLSKNEITLLNKAHEICFNLCESLSKYQIPETINHCDFHENNMILNQKTGNVSIIDWGETVITHPFFSLNGCLW NITFFYPIKQSDKIYEILQRQCITPWLGLHDETDLLNALKIANQLNGVFAALSYKRIYDATMDQSQTVQQEHPGSIAGCL RSFINHFHLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38385; Mature: 38385
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKQIKNELALKWALEHLALNDEFKIIDQQKIIETAYSTVHRITSSESNVYYLKQTPEM CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE LYLEPQTLTYIKEQRCHNIPQIIAENKHLNCFLMLSCGDETLRNLFKENIDLEMLKAGIL EEECCHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHH NYTKIQRLVENQLPQLMELGLPDWRLEKFSSLYDQLIQQEELLSSDGLSKNEITLLNKAH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EICFNLCESLSKYQIPETINHCDFHENNMILNQKTGNVSIIDWGETVITHPFFSLNGCLW HHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHHCCCHHHCCEEE NITFFYPIKQSDKIYEILQRQCITPWLGLHDETDLLNALKIANQLNGVFAALSYKRIYDA EEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMDQSQTVQQEHPGSIAGCLRSFINHFHLA HCCHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQKQIKNELALKWALEHLALNDEFKIIDQQKIIETAYSTVHRITSSESNVYYLKQTPEM CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE LYLEPQTLTYIKEQRCHNIPQIIAENKHLNCFLMLSCGDETLRNLFKENIDLEMLKAGIL EEECCHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHH NYTKIQRLVENQLPQLMELGLPDWRLEKFSSLYDQLIQQEELLSSDGLSKNEITLLNKAH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EICFNLCESLSKYQIPETINHCDFHENNMILNQKTGNVSIIDWGETVITHPFFSLNGCLW HHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHHCCCHHHCCEEE NITFFYPIKQSDKIYEILQRQCITPWLGLHDETDLLNALKIANQLNGVFAALSYKRIYDA EEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMDQSQTVQQEHPGSIAGCLRSFINHFHLA HCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA