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The map label for this gene is 52841341

Identifier: 52841341

GI number: 52841341

Start: 1211242

End: 1211661

Strand: Reverse

Name: 52841341

Synonym: lpg1107

Alternate gene names: NA

Gene position: 1211661-1211242 (Counterclockwise)

Preceding gene: 52841342

Following gene: 52841340

Centisome position: 35.66

GC content: 36.67

Gene sequence:

>420_bases
ATGAATTTTAGCGCTTGGTACTTTCCATCTTTGGCCGCATTAATTCTGTATGGCGCTTGGGGGTATTGGGGAACAAGAGC
CTCAGATTTCATTAATCCCCTGTCTATTACTTTTTATTCAAGTATAGGAGTTTTAATTTCCGGGATTATTGCTTTGATTT
TATTGGGTTTCAAGCCTGAACTTTCTGTCAAAGGGAGTACTTACGGTTTGCTAAATGGTTTGGCTAATGGAATTGCCTGT
ATTTTTTTTATTTTGGCATTACGTAATGGCCCCACCATGCCGGTAGTTTTGGTCACCTCTATGTATCCCATGATTACTTT
AATATTCTGCATGATTTTTCTCAAACAAGAATTAAGTTTAAAACAAGGATTAGGTATGGTTTTCGCACTGACTGCCTTAA
TTTTATTTTCAACTGAATGA

Upstream 100 bases:

>100_bases
TCATGATAATAAATAAAATTTAGTAACAAACAGTATTATTTTCACTAATGAACAGTTATCCTGAGCAAACCTCAAACAAA
TTGCTTGATAAGATAAAATT

Downstream 100 bases:

>100_bases
AAACCCAAATCAGATGAAATAGCCTACATTTCTTTGACTTATCAAAATTAAAGAGATTTACTTAAAAACTTTGGCCAAGC
AAAAATCTTCTTGACTAATA

Product: transporter family protein

Products: NA

Alternate protein names: DMT Family Permease

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNFSAWYFPSLAALILYGAWGYWGTRASDFINPLSITFYSSIGVLISGIIALILLGFKPELSVKGSTYGLLNGLANGIAC
IFFILALRNGPTMPVVLVTSMYPMITLIFCMIFLKQELSLKQGLGMVFALTALILFSTE

Sequences:

>Translated_139_residues
MNFSAWYFPSLAALILYGAWGYWGTRASDFINPLSITFYSSIGVLISGIIALILLGFKPELSVKGSTYGLLNGLANGIAC
IFFILALRNGPTMPVVLVTSMYPMITLIFCMIFLKQELSLKQGLGMVFALTALILFSTE
>Mature_139_residues
MNFSAWYFPSLAALILYGAWGYWGTRASDFINPLSITFYSSIGVLISGIIALILLGFKPELSVKGSTYGLLNGLANGIAC
IFFILALRNGPTMPVVLVTSMYPMITLIFCMIFLKQELSLKQGLGMVFALTALILFSTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15177; Mature: 15177

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSAWYFPSLAALILYGAWGYWGTRASDFINPLSITFYSSIGVLISGIIALILLGFKPE
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSVKGSTYGLLNGLANGIACIFFILALRNGPTMPVVLVTSMYPMITLIFCMIFLKQELSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGLGMVFALTALILFSTE
HHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFSAWYFPSLAALILYGAWGYWGTRASDFINPLSITFYSSIGVLISGIIALILLGFKPE
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSVKGSTYGLLNGLANGIACIFFILALRNGPTMPVVLVTSMYPMITLIFCMIFLKQELSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGLGMVFALTALILFSTE
HHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA