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The map label for this gene is 52841305

Identifier: 52841305

GI number: 52841305

Start: 1167447

End: 1167722

Strand: Reverse

Name: 52841305

Synonym: lpg1071

Alternate gene names: NA

Gene position: 1167722-1167447 (Counterclockwise)

Preceding gene: 52841306

Following gene: 52841304

Centisome position: 34.37

GC content: 33.7

Gene sequence:

>276_bases
ATGAATAAAACTCTAACTAAAGTACGATGCCGTAAAATCATTCCTCTCTTCTTAAAAATGATTCAGAACTTGAAACAAAG
CCCATTTAAATCATTAGTTGCCCTGGGAAAAACCTTAGATTCATGGAAAGAAGAAATTGCCTGTATGTGGCGGTTTAGTA
AATCAAATGGCATCACTGAAGGATTTCATCGGAAAATGAAATTAATACAACGAAGAGCTTATGGGTTTAGAAACTTTGAA
AACTACCGATTAAGAGTTAGAGTATTATGTGCTTGA

Upstream 100 bases:

>100_bases
TTCCAACAACAGCTTCATGTAAATCTGTGTCGCTTAAATCGGCTCTGATTCCTTCATTGAAGCCATTTATCACTTCCAAC
AACAGCTTCATGAGCTATTA

Downstream 100 bases:

>100_bases
TAAAATGCCCCCGTATTTGGGAAAGACCCAGATATTATAGCTTCATGAATGTTCGACACATATTCGACACGTTATAGAAA
TTAAAATATAAGTTTTACTA

Product: transposase TnpA (Uma4)

Products: NA

Alternate protein names: Transposase-Like Protein; Transposase TnpA; TnpA Transposase

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNKTLTKVRCRKIIPLFLKMIQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFE
NYRLRVRVLCA

Sequences:

>Translated_91_residues
MNKTLTKVRCRKIIPLFLKMIQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFE
NYRLRVRVLCA
>Mature_91_residues
MNKTLTKVRCRKIIPLFLKMIQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFE
NYRLRVRVLCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10883; Mature: 10883

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTLTKVRCRKIIPLFLKMIQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITE
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GFHRKMKLIQRRAYGFRNFENYRLRVRVLCA
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNKTLTKVRCRKIIPLFLKMIQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITE
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GFHRKMKLIQRRAYGFRNFENYRLRVRVLCA
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA