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The map label for this gene is tnpA [H]

Identifier: 52841306

GI number: 52841306

Start: 1167775

End: 1168695

Strand: Reverse

Name: tnpA [H]

Synonym: lpg1072

Alternate gene names: 52841306

Gene position: 1168695-1167775 (Counterclockwise)

Preceding gene: 52841308

Following gene: 52841305

Centisome position: 34.4

GC content: 37.24

Gene sequence:

>921_bases
GTGCCGAGACATGATGTTATCCTAAATTTACCTGGTTTTTCTATAAAAAAAGTAAGTGGTTATCAACCCTTGTTATTGGA
TTTAACCTATAACCGTTTACCACGCTGTTCTCATTGTTCAAGCAAAAAGGTTCGAAAGAAATCGAGTTATGAACGAAAGG
TTCATCATGAATTAATAGGTCACAGACGGACTATTCTTCGATTCAAAGCATACAAACTGTTTTGCAATGAATGCGGTCGT
TATGGTAATCAACAATTTCCCGGAATTGCTAAATATCAACGGTCTACAGAGCGTTTACAAGTTCAAATATTTCATCACCA
TACGAGTGGTATTTCCCAGAAAGAGTTATCTCTTCAATTTAAACAAGGGAAAGCAACCATTGAACGTTGGTATCATAGAC
GCTATCAAATAGAAGGAAATGAATTGCTCAATACGCCTTGTCCAAAAGTGTTAGGTCTTGATGAGCACTTCTTTAGTCGA
AAACATGGCTTTGCAACTACCTTATGTGACCTTAAAAAGCATAAAGTGTTTGATATCGTTAAAGGACGAAGAGAGGTTGA
TTTAAATCACTACCTTAACTCTTTAAAAGGGAAAGACCGTGTTCAAGTGGTCTGTATGGATTTAAGTAATACCTACCGCT
CTCTGGTCAAAAAGCATTTCCCAAACGCTAAAATAGTAGCTGATAGGTTTCACGTCATTCGATTAGTACAACATCAATGT
ATGATGACTTATCGTGAGTTATCCAGCTCAATTAAAAATAACCGAGGTCTATTGGCTTTGTTGCGAACCAAACCAGATAA
ACTCACATCTCATAAGAAAATAAAGCGAGACACTTTCCTCGCTGAAAATCCAGCCATTGAAGCCATTTATCACTTCCAAC
AACAGCTTCATGTAAATCTGTGTCGCTTAAATCGGCTCTGA

Upstream 100 bases:

>100_bases
TTTTTTAGACAGATATTAGGCTCTACCCCAACAAAGGGGGCACTTTAATCAAGTTAGTATAAACTAACCTCTTGATTTCG
CGATCAAAAAGGAGATTAAA

Downstream 100 bases:

>100_bases
TTCCTTCATTGAAGCCATTTATCACTTCCAACAACAGCTTCATGAGCTATTAATGAATAAAACTCTAACTAAAGTACGAT
GCCGTAAAATCATTCCTCTC

Product: transposase TnpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPRHDVILNLPGFSIKKVSGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGR
YGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQFKQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSR
KHGFATTLCDLKKHKVFDIVKGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHVNLCRLNRL

Sequences:

>Translated_306_residues
MPRHDVILNLPGFSIKKVSGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGR
YGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQFKQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSR
KHGFATTLCDLKKHKVFDIVKGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHVNLCRLNRL
>Mature_305_residues
PRHDVILNLPGFSIKKVSGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGRY
GNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQFKQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSRK
HGFATTLCDLKKHKVFDIVKGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQCM
MTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHVNLCRLNRL

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 36070; Mature: 35938

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRHDVILNLPGFSIKKVSGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIG
CCCCCEEEECCCCCEEECCCCCCEEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HRRTILRFKAYKLFCNECGRYGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHEEE
KQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSRKHGFATTLCDLKKHKVFDIV
CCCHHHHHHHHHHHEEECCCCCCCCCCCHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
KGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
CCCHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHVNL
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
CRLNRL
HHHCCC
>Mature Secondary Structure 
PRHDVILNLPGFSIKKVSGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIG
CCCCEEEECCCCCEEECCCCCCEEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HRRTILRFKAYKLFCNECGRYGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHEEE
KQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSRKHGFATTLCDLKKHKVFDIV
CCCHHHHHHHHHHHEEECCCCCCCCCCCHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
KGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
CCCHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHVNL
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
CRLNRL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]