Click here to switch to the map view.

The map label for this gene is ymfB [C]

Identifier: 52788012

GI number: 52788012

Start: 4187825

End: 4188235

Strand: Reverse

Name: ymfB [C]

Synonym: BLi04340

Alternate gene names: 52788012

Gene position: 4188235-4187825 (Counterclockwise)

Preceding gene: 52788013

Following gene: 52788011

Centisome position: 99.19

GC content: 48.18

Gene sequence:

>411_bases
ATGGAACGTGTCGATGTTGTATATTCATTCGCGGAAGAGAACAACATTCTGATGGTGAAAAACAAGAAAAATCAATCATG
GACATTGCCGGGCGGCAAGGTGGAAGCTGGAGAATCGCTGACGGAAGCCGCGGCGAGAGAAATGAAGGAAGAAACTGGCT
ATGGAATTCAGCCTCTTGATATTTTAGCCGTAAATGAAGCGGTGATCAGCAGCGAGCATGTATATTTCATCGTCTTTAGA
GCACGGATCACCGACCGTCCGGATGCCATCACGTTTGACGAGAACATTGTTGAAGCCAAGTGGGTGCCGCTTCATGAAGC
TGACCGGCTGTTGTCTGTATTCCATCCGAATGGAATCATGCACTGGCTGAACCGCGAAGGGGCGGAGTATCATCACGAAG
GGAAAAAATAA

Upstream 100 bases:

>100_bases
AACAAATGTGGTGAGAAGCGTTTATCGTCCGAACTAAATTCTAGAAGAGCCTCTGCAGTCCGCAGGGGCTTTGTTTTTCA
ATGACAAGGAGGGCAAACGG

Downstream 100 bases:

>100_bases
TAGAAAAAAATAAAAAAATATATTGCCACTTCTGTTCGTTCTATGATAATATAAATCTCGTTGTTGCGAAAACAACGAGA
CGAGCCATTAGCTCAGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Phosphohydrolase; Hydrolase NUDIX Family

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MERVDVVYSFAEENNILMVKNKKNQSWTLPGGKVEAGESLTEAAAREMKEETGYGIQPLDILAVNEAVISSEHVYFIVFR
ARITDRPDAITFDENIVEAKWVPLHEADRLLSVFHPNGIMHWLNREGAEYHHEGKK

Sequences:

>Translated_136_residues
MERVDVVYSFAEENNILMVKNKKNQSWTLPGGKVEAGESLTEAAAREMKEETGYGIQPLDILAVNEAVISSEHVYFIVFR
ARITDRPDAITFDENIVEAKWVPLHEADRLLSVFHPNGIMHWLNREGAEYHHEGKK
>Mature_136_residues
MERVDVVYSFAEENNILMVKNKKNQSWTLPGGKVEAGESLTEAAAREMKEETGYGIQPLDILAVNEAVISSEHVYFIVFR
ARITDRPDAITFDENIVEAKWVPLHEADRLLSVFHPNGIMHWLNREGAEYHHEGKK

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 15536; Mature: 15536

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVDVVYSFAEENNILMVKNKKNQSWTLPGGKVEAGESLTEAAAREMKEETGYGIQPLD
CCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
ILAVNEAVISSEHVYFIVFRARITDRPDAITFDENIVEAKWVPLHEADRLLSVFHPNGIM
EEEECHHHHCCCCEEEEEEEEEECCCCCEEEECCCCEEEEECCHHHHHHHHEECCCCCCE
HWLNREGAEYHHEGKK
EHHCCCCCCCCCCCCC
>Mature Secondary Structure
MERVDVVYSFAEENNILMVKNKKNQSWTLPGGKVEAGESLTEAAAREMKEETGYGIQPLD
CCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
ILAVNEAVISSEHVYFIVFRARITDRPDAITFDENIVEAKWVPLHEADRLLSVFHPNGIM
EEEECHHHHCCCCEEEEEEEEEECCCCCEEEECCCCEEEEECCHHHHHHHHEECCCCCCE
HWLNREGAEYHHEGKK
EHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA