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The map label for this gene is licR [H]

Identifier: 52787767

GI number: 52787767

Start: 3914230

End: 3916179

Strand: Reverse

Name: licR [H]

Synonym: BLi04090

Alternate gene names: 52787767

Gene position: 3916179-3914230 (Counterclockwise)

Preceding gene: 52787768

Following gene: 52787766

Centisome position: 92.74

GC content: 46.56

Gene sequence:

>1950_bases
ATGCTCAATGCTCGGCTTAAGCTTATCCTCGGCGAATTGATAGGGGCAGAATCACCATTAACCAGCGCATATTTGGCCAA
TGAGCTAAATGTGACCTCTCGGACGATCAGATCAGATGTGAAAGAATTAGACCGGCTTCTCTCCAAAAACGGCGCTGCCG
TCCAATCGATCAGGGGTGCAGGCTATCGGCTCTCCATCAAGAATGACCGCCTCTTTCGCCAGCTTCTGCAGCACACATTT
CATCAAGAGCTTTCTACTCCCGTTTTTCCAAATGAGCGTATTCTCTATTTATTAAAAAGGCTTCTCTTAACTGAGGAGTA
TGTCAAACTTGAAGATTTAGCCGCTGAGATGTATATCAGCAAATCGACGGTCCAAAACGATATGAGAGATGTGAAGAAAA
GGCTTAAACCTTACGACATTGAGCTGAAGATCAAGCCGAATTACGGCTTTAAGCTGAAGGGAGATGAGATGAAGCTGCGA
TCGTGCATCGCAGAGCACCTTTTTCCAAAGCGGGAAACGGATATTGATATTATGAACACCCGGATATCCATTCTCCCAAA
AGAAGAGCTTGCTATGATCCGTCAAACGATTTTAGAAAAAATAAGCGAAGATCAAATTTCTCTTTCAGATATCGGACTAA
ACAATCTTCTCATCCACGTCGCCATTGCATGCAAACGCATCCGAAGCGGCAAACATGTTTCTCTTTATTCCAAAGATGTA
AAGGAGATTATGAATCATAAAGAATATGAAGTGGCGAGGGCGATTGTCCGCACTCTTGAACAAAAGCTGCACGTGGCGTT
TCCAGAAAAAGAAACGGCCTACATCGCCATCCATTTGCTTGGCGCGAAAAGGACGGTTATGGCCGCCATTCGCAGCGGTG
CAATCGAAAGCATGATGGATGAAGAAGAGACAGACCGGCTGACGCAATTGATCATGAAAACCATCGATCAAAAATTCACC
CTCGGCATTGGGGATGACAAAGAATTAAAAATCGGTCTCGGCCTTCACCTAAAACCGGCTTTGAATCGCTGCAGATACGG
CATGAATATCAGAAATCCAATGCTGGATGCAATTAAGGCCAATTATCCGCTCGCATTTGAAGCGGGTATTCAAGCCGGTG
AAGTCATCAAAAGAGAGACGGGATTTGACATTCAGGAAAGCGAGGTCGGCTACCTCGCGTTGCATATAGGCGCAGCCATG
GAAAGAAGAAACATGAACAGGCCCTCAAAACGCTGTATGATTGTCTGTGCTTCAGGGGCCGGAAGCGCCATGCTGCTTCA
GGACAGACTGCGGGCAACATTCGGTTCAAAGCTTGAGATCCTTGGAACGGTTGATTACTACAAGCTGAATCAAATGTCGC
TCCATGCACTCGACTTTGTTATCAGCACAATACCGCTGTCCGATGATCTTCCCATTCCGGTGATTCAAGTAAACACAATA
CTGGGAGGGGGAGATTTAACGAAAATAGAACAAGTGCTTGCCGAAGATGACGGAATCGCTTCGACTTATACGAGAAAAGA
GCTTGTCTTTTTGCGGGAAAGTCTGTCTTCAAGAGAGGATGTCCTTCGCTTTCTGTGCGGAAAAGTGACGCAATCAGGGC
TTGCAGACGCGGGGCTTGAAGCCTCGGTCTTTGAACGGGAGGCCGTTGCGCCCACTTGCTTCGGCAATCTGGTTGCGATT
CCGCATCCGATGACACCAAAAACCGCTTCAACTTTTTGGGCGGTTTGCACGCTGCAAAAACCGATAGTCTGGGAGAATAA
GAGGGTTCAATTCGTCTGCCTTCTTTGTGTAGAAAAGGACAATACAGCAAATTTGCAGGAGATGTACAAATTTTTGGGCC
GTGTTTTAGATGACAGGGCGATTGTCCGGGAACTCCTGAAATGCAAAACGTACGGGGAGTTTATGTCCGTCTTTAAAAAA
AGCGGGCCGGCTCATCGATATGCCAAATGA

Upstream 100 bases:

>100_bases
ATTTACTTAACTATGAGACAAATTTCACAAAAAAAATGAATATACCTGAGTGTATAGGTTTGTTCTCGGTTCAAGTATCT
TAGTGGGAGGGTCTTTTTCT

Downstream 100 bases:

>100_bases
AGATGTCCCCTTGTCTTTTTTCCTCTTCGCTGAGGAAAATCATTAAGTGTATATGAAAACGGTTTCATTATATGATGAAA
CTGTAAGAGAGATCAGACAA

Product: LicR

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
MLNARLKLILGELIGAESPLTSAYLANELNVTSRTIRSDVKELDRLLSKNGAAVQSIRGAGYRLSIKNDRLFRQLLQHTF
HQELSTPVFPNERILYLLKRLLLTEEYVKLEDLAAEMYISKSTVQNDMRDVKKRLKPYDIELKIKPNYGFKLKGDEMKLR
SCIAEHLFPKRETDIDIMNTRISILPKEELAMIRQTILEKISEDQISLSDIGLNNLLIHVAIACKRIRSGKHVSLYSKDV
KEIMNHKEYEVARAIVRTLEQKLHVAFPEKETAYIAIHLLGAKRTVMAAIRSGAIESMMDEEETDRLTQLIMKTIDQKFT
LGIGDDKELKIGLGLHLKPALNRCRYGMNIRNPMLDAIKANYPLAFEAGIQAGEVIKRETGFDIQESEVGYLALHIGAAM
ERRNMNRPSKRCMIVCASGAGSAMLLQDRLRATFGSKLEILGTVDYYKLNQMSLHALDFVISTIPLSDDLPIPVIQVNTI
LGGGDLTKIEQVLAEDDGIASTYTRKELVFLRESLSSREDVLRFLCGKVTQSGLADAGLEASVFEREAVAPTCFGNLVAI
PHPMTPKTASTFWAVCTLQKPIVWENKRVQFVCLLCVEKDNTANLQEMYKFLGRVLDDRAIVRELLKCKTYGEFMSVFKK
SGPAHRYAK

Sequences:

>Translated_649_residues
MLNARLKLILGELIGAESPLTSAYLANELNVTSRTIRSDVKELDRLLSKNGAAVQSIRGAGYRLSIKNDRLFRQLLQHTF
HQELSTPVFPNERILYLLKRLLLTEEYVKLEDLAAEMYISKSTVQNDMRDVKKRLKPYDIELKIKPNYGFKLKGDEMKLR
SCIAEHLFPKRETDIDIMNTRISILPKEELAMIRQTILEKISEDQISLSDIGLNNLLIHVAIACKRIRSGKHVSLYSKDV
KEIMNHKEYEVARAIVRTLEQKLHVAFPEKETAYIAIHLLGAKRTVMAAIRSGAIESMMDEEETDRLTQLIMKTIDQKFT
LGIGDDKELKIGLGLHLKPALNRCRYGMNIRNPMLDAIKANYPLAFEAGIQAGEVIKRETGFDIQESEVGYLALHIGAAM
ERRNMNRPSKRCMIVCASGAGSAMLLQDRLRATFGSKLEILGTVDYYKLNQMSLHALDFVISTIPLSDDLPIPVIQVNTI
LGGGDLTKIEQVLAEDDGIASTYTRKELVFLRESLSSREDVLRFLCGKVTQSGLADAGLEASVFEREAVAPTCFGNLVAI
PHPMTPKTASTFWAVCTLQKPIVWENKRVQFVCLLCVEKDNTANLQEMYKFLGRVLDDRAIVRELLKCKTYGEFMSVFKK
SGPAHRYAK
>Mature_649_residues
MLNARLKLILGELIGAESPLTSAYLANELNVTSRTIRSDVKELDRLLSKNGAAVQSIRGAGYRLSIKNDRLFRQLLQHTF
HQELSTPVFPNERILYLLKRLLLTEEYVKLEDLAAEMYISKSTVQNDMRDVKKRLKPYDIELKIKPNYGFKLKGDEMKLR
SCIAEHLFPKRETDIDIMNTRISILPKEELAMIRQTILEKISEDQISLSDIGLNNLLIHVAIACKRIRSGKHVSLYSKDV
KEIMNHKEYEVARAIVRTLEQKLHVAFPEKETAYIAIHLLGAKRTVMAAIRSGAIESMMDEEETDRLTQLIMKTIDQKFT
LGIGDDKELKIGLGLHLKPALNRCRYGMNIRNPMLDAIKANYPLAFEAGIQAGEVIKRETGFDIQESEVGYLALHIGAAM
ERRNMNRPSKRCMIVCASGAGSAMLLQDRLRATFGSKLEILGTVDYYKLNQMSLHALDFVISTIPLSDDLPIPVIQVNTI
LGGGDLTKIEQVLAEDDGIASTYTRKELVFLRESLSSREDVLRFLCGKVTQSGLADAGLEASVFEREAVAPTCFGNLVAI
PHPMTPKTASTFWAVCTLQKPIVWENKRVQFVCLLCVEKDNTANLQEMYKFLGRVLDDRAIVRELLKCKTYGEFMSVFKK
SGPAHRYAK

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 73242; Mature: 73242

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNARLKLILGELIGAESPLTSAYLANELNVTSRTIRSDVKELDRLLSKNGAAVQSIRGA
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
GYRLSIKNDRLFRQLLQHTFHQELSTPVFPNERILYLLKRLLLTEEYVKLEDLAAEMYIS
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSTVQNDMRDVKKRLKPYDIELKIKPNYGFKLKGDEMKLRSCIAEHLFPKRETDIDIMNT
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCEEECC
RISILPKEELAMIRQTILEKISEDQISLSDIGLNNLLIHVAIACKRIRSGKHVSLYSKDV
EEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCEEEHHHHHH
KEIMNHKEYEVARAIVRTLEQKLHVAFPEKETAYIAIHLLGAKRTVMAAIRSGAIESMMD
HHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHC
EEETDRLTQLIMKTIDQKFTLGIGDDKELKIGLGLHLKPALNRCRYGMNIRNPMLDAIKA
HHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCEEHHHHHHHHCCCCCCCHHHHHHHC
NYPLAFEAGIQAGEVIKRETGFDIQESEVGYLALHIGAAMERRNMNRPSKRCMIVCASGA
CCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEECCC
GSAMLLQDRLRATFGSKLEILGTVDYYKLNQMSLHALDFVISTIPLSDDLPIPVIQVNTI
CCHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
LGGGDLTKIEQVLAEDDGIASTYTRKELVFLRESLSSREDVLRFLCGKVTQSGLADAGLE
ECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCC
ASVFEREAVAPTCFGNLVAIPHPMTPKTASTFWAVCTLQKPIVWENKRVQFVCLLCVEKD
HHHHHHHCCCCHHCCCEEECCCCCCCCCHHHHEEEEEECCCCEECCCCEEEEEEEEEECC
NTANLQEMYKFLGRVLDDRAIVRELLKCKTYGEFMSVFKKSGPAHRYAK
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLNARLKLILGELIGAESPLTSAYLANELNVTSRTIRSDVKELDRLLSKNGAAVQSIRGA
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
GYRLSIKNDRLFRQLLQHTFHQELSTPVFPNERILYLLKRLLLTEEYVKLEDLAAEMYIS
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSTVQNDMRDVKKRLKPYDIELKIKPNYGFKLKGDEMKLRSCIAEHLFPKRETDIDIMNT
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCEEECC
RISILPKEELAMIRQTILEKISEDQISLSDIGLNNLLIHVAIACKRIRSGKHVSLYSKDV
EEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCEEEHHHHHH
KEIMNHKEYEVARAIVRTLEQKLHVAFPEKETAYIAIHLLGAKRTVMAAIRSGAIESMMD
HHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHC
EEETDRLTQLIMKTIDQKFTLGIGDDKELKIGLGLHLKPALNRCRYGMNIRNPMLDAIKA
HHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCEEHHHHHHHHCCCCCCCHHHHHHHC
NYPLAFEAGIQAGEVIKRETGFDIQESEVGYLALHIGAAMERRNMNRPSKRCMIVCASGA
CCCEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEECCC
GSAMLLQDRLRATFGSKLEILGTVDYYKLNQMSLHALDFVISTIPLSDDLPIPVIQVNTI
CCHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
LGGGDLTKIEQVLAEDDGIASTYTRKELVFLRESLSSREDVLRFLCGKVTQSGLADAGLE
ECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCC
ASVFEREAVAPTCFGNLVAIPHPMTPKTASTFWAVCTLQKPIVWENKRVQFVCLLCVEKD
HHHHHHHCCCCHHCCCEEECCCCCCCCCHHHHEEEEEECCCCEECCCCEEEEEEEEEECC
NTANLQEMYKFLGRVLDDRAIVRELLKCKTYGEFMSVFKKSGPAHRYAK
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]