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The map label for this gene is licB [H]

Identifier: 52787766

GI number: 52787766

Start: 3913798

End: 3914103

Strand: Reverse

Name: licB [H]

Synonym: BLi04089

Alternate gene names: 52787766

Gene position: 3914103-3913798 (Counterclockwise)

Preceding gene: 52787767

Following gene: 52787765

Centisome position: 92.69

GC content: 44.77

Gene sequence:

>306_bases
ATGAATATCTTATTAGCTTGCGCCGCAGGAATGTCAACGAGTCTGCTTGTGACGAAAATGGAAAAAAGTGCAGAGGAACA
AGGAAAAGACTATAAAATCTGGGCCGTTTCCGGAGGAGAGGTTCAGAATCATATCGATAAAGCCGACGTATTGCTTCTTG
GCCCGCAAGTCCGTTACATGCTCCCGCAATTAAAGAAATTAGGAGAATCGAAAGGTGTATCCGTCGATGTCATCAATACG
GTCCATTACGGAACTTGTAATGGAGCTGAAGTGTTAAAATCCGCCGAACAGCTTGCCGGCTCTTAA

Upstream 100 bases:

>100_bases
TCGCTGAGGAAAATCATTAAGTGTATATGAAAACGGTTTCATTATATGATGAAACTGTAAGAGAGATCAGACAAGATACG
TAAAAGGGGGACTATTTAAC

Downstream 100 bases:

>100_bases
AGGAGGCGGCACAAGTGAACAAGTTTAATGCATTTTTAGAGGAGAAGATCATGCCGGTTGCCGGCAGAATTGCCGCCCAG
CGCCATTTGCAGGCTCTCAG

Product: LicB

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNILLACAAGMSTSLLVTKMEKSAEEQGKDYKIWAVSGGEVQNHIDKADVLLLGPQVRYMLPQLKKLGESKGVSVDVINT
VHYGTCNGAEVLKSAEQLAGS

Sequences:

>Translated_101_residues
MNILLACAAGMSTSLLVTKMEKSAEEQGKDYKIWAVSGGEVQNHIDKADVLLLGPQVRYMLPQLKKLGESKGVSVDVINT
VHYGTCNGAEVLKSAEQLAGS
>Mature_101_residues
MNILLACAAGMSTSLLVTKMEKSAEEQGKDYKIWAVSGGEVQNHIDKADVLLLGPQVRYMLPQLKKLGESKGVSVDVINT
VHYGTCNGAEVLKSAEQLAGS

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=95, Percent_Identity=45.2631578947368, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 10778; Mature: 10778

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLACAAGMSTSLLVTKMEKSAEEQGKDYKIWAVSGGEVQNHIDKADVLLLGPQVRYM
CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCEEEECCHHHHH
LPQLKKLGESKGVSVDVINTVHYGTCNGAEVLKSAEQLAGS
HHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILLACAAGMSTSLLVTKMEKSAEEQGKDYKIWAVSGGEVQNHIDKADVLLLGPQVRYM
CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCEEEECCHHHHH
LPQLKKLGESKGVSVDVINTVHYGTCNGAEVLKSAEQLAGS
HHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]