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The map label for this gene is yvfF [H]

Identifier: 52787364

GI number: 52787364

Start: 3506905

End: 3507882

Strand: Reverse

Name: yvfF [H]

Synonym: BLi03680

Alternate gene names: 52787364

Gene position: 3507882-3506905 (Counterclockwise)

Preceding gene: 52787365

Following gene: 52787362

Centisome position: 83.07

GC content: 48.88

Gene sequence:

>978_bases
ATGGCGATTACATATTCCATGGACAGCTTAAAGCATAAGCTGGCAGAAATTTTGGATGTCATTCCAAGGCATTCATCAGT
CGTTTACTTGGACTACCCGCTATACGGAAACGTCGGGGATCTATTGATCATGAAAGGAACGGAAGCTTTTTTTGAAGCAT
ACGGCATCAAGGTGCGCGAAAGATGGAATGCGGAGAATTTCATTCCGGGCCGCCGCATTCCAAAGGACGCCATCATTGTT
TGTCAGGGGGGCGGCAATTTCGGCGACTTGTACCCTCACTTCCAGCAGTTCAGAGAACGGGTGGTCGAACATTACCCGGA
CAACCGGATCGTCATTCTGCCGCAGTCGATTTATTATGAGCATGAAGAAAATATAATAAAAACGCGCGGCATTTTGGCGG
CTCACCCGGATCTGCACTTATTCACGCGGGAAAAGGCATCATTCGATTTTGCCGTCAAGCGTTTCGAAGAGGTGAAAAAC
ATCAAAATGATGCCCGATATGGCTCACCAGCTCTGGCCGATCGCGGCACCTGCCGAAAAGCCGTCCGAGTCCGTTCTGCG
GTTGATCAGGACCGACAAAGAAGCCAACAGCAGCCTGCAGAAAGCAGGGGAGCCGGACACGTACGATTGGAACGTCATCT
TATCAGAAGGCGACAAACGCGGAATCAAACGCCTGCAGACGATCAATGTCCTCAACAAAAAAGCGGGCAATCCGCTGCCG
ATCGCTTCTTATTGGAAACGCTTTTCGGACAGCCTCGTCGACAAATCAATCCGTTTCTTCAGCCGCTATGAATCAGTCGT
TACTTCAAGGCTGCACGGCCACATCTTATCGTGCCTGCTCGGAAAAGAAAACGTAGTGATTGACAACTCCTACGGAAAAA
ACGCGAATTACTACAATACATGGATGAAAGACATCCCGAATACGAAACTGATTCAAAACCATCAGACAGAAGCAGAAAAA
CCGCCTGTTCACGTATGA

Upstream 100 bases:

>100_bases
GGGCTCTGCCTGCCGTCAGGATCAAGTATGACGCGAAAAGAGCAGGACCGGGTAATTCAAATCGTTGCCGACCGGATTAA
ATATAAATGAGGTGCTAAAC

Downstream 100 bases:

>100_bases
CAGGCGGTTTTTTTGCTATGCTTCTTCACGCTTTACTTTGTTGTAGGCTTCATCCAAATGCTGAATCCGTTTTAAAACGA
CGGCGTTTTTTGTCAGCTGG

Product: YvfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MAITYSMDSLKHKLAEILDVIPRHSSVVYLDYPLYGNVGDLLIMKGTEAFFEAYGIKVRERWNAENFIPGRRIPKDAIIV
CQGGGNFGDLYPHFQQFRERVVEHYPDNRIVILPQSIYYEHEENIIKTRGILAAHPDLHLFTREKASFDFAVKRFEEVKN
IKMMPDMAHQLWPIAAPAEKPSESVLRLIRTDKEANSSLQKAGEPDTYDWNVILSEGDKRGIKRLQTINVLNKKAGNPLP
IASYWKRFSDSLVDKSIRFFSRYESVVTSRLHGHILSCLLGKENVVIDNSYGKNANYYNTWMKDIPNTKLIQNHQTEAEK
PPVHV

Sequences:

>Translated_325_residues
MAITYSMDSLKHKLAEILDVIPRHSSVVYLDYPLYGNVGDLLIMKGTEAFFEAYGIKVRERWNAENFIPGRRIPKDAIIV
CQGGGNFGDLYPHFQQFRERVVEHYPDNRIVILPQSIYYEHEENIIKTRGILAAHPDLHLFTREKASFDFAVKRFEEVKN
IKMMPDMAHQLWPIAAPAEKPSESVLRLIRTDKEANSSLQKAGEPDTYDWNVILSEGDKRGIKRLQTINVLNKKAGNPLP
IASYWKRFSDSLVDKSIRFFSRYESVVTSRLHGHILSCLLGKENVVIDNSYGKNANYYNTWMKDIPNTKLIQNHQTEAEK
PPVHV
>Mature_324_residues
AITYSMDSLKHKLAEILDVIPRHSSVVYLDYPLYGNVGDLLIMKGTEAFFEAYGIKVRERWNAENFIPGRRIPKDAIIVC
QGGGNFGDLYPHFQQFRERVVEHYPDNRIVILPQSIYYEHEENIIKTRGILAAHPDLHLFTREKASFDFAVKRFEEVKNI
KMMPDMAHQLWPIAAPAEKPSESVLRLIRTDKEANSSLQKAGEPDTYDWNVILSEGDKRGIKRLQTINVLNKKAGNPLPI
ASYWKRFSDSLVDKSIRFFSRYESVVTSRLHGHILSCLLGKENVVIDNSYGKNANYYNTWMKDIPNTKLIQNHQTEAEKP
PVHV

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG5039

COG function: function code GM; Exopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007345 [H]

Pfam domain/function: PF04230 PS_pyruv_trans [H]

EC number: NA

Molecular weight: Translated: 37430; Mature: 37299

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITYSMDSLKHKLAEILDVIPRHSSVVYLDYPLYGNVGDLLIMKGTEAFFEAYGIKVRE
CEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHCCCEEE
RWNAENFIPGRRIPKDAIIVCQGGGNFGDLYPHFQQFRERVVEHYPDNRIVILPQSIYYE
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
HEENIIKTRGILAAHPDLHLFTREKASFDFAVKRFEEVKNIKMMPDMAHQLWPIAAPAEK
HHCCHHHHCCEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
PSESVLRLIRTDKEANSSLQKAGEPDTYDWNVILSEGDKRGIKRLQTINVLNKKAGNPLP
CHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
IASYWKRFSDSLVDKSIRFFSRYESVVTSRLHGHILSCLLGKENVVIDNSYGKNANYYNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
WMKDIPNTKLIQNHQTEAEKPPVHV
HHHHCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AITYSMDSLKHKLAEILDVIPRHSSVVYLDYPLYGNVGDLLIMKGTEAFFEAYGIKVRE
EEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHCCCEEE
RWNAENFIPGRRIPKDAIIVCQGGGNFGDLYPHFQQFRERVVEHYPDNRIVILPQSIYYE
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
HEENIIKTRGILAAHPDLHLFTREKASFDFAVKRFEEVKNIKMMPDMAHQLWPIAAPAEK
HHCCHHHHCCEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
PSESVLRLIRTDKEANSSLQKAGEPDTYDWNVILSEGDKRGIKRLQTINVLNKKAGNPLP
CHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
IASYWKRFSDSLVDKSIRFFSRYESVVTSRLHGHILSCLLGKENVVIDNSYGKNANYYNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
WMKDIPNTKLIQNHQTEAEKPPVHV
HHHHCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]