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The map label for this gene is araN [H]

Identifier: 52786754

GI number: 52786754

Start: 2908934

End: 2910238

Strand: Reverse

Name: araN [H]

Synonym: BLi03024

Alternate gene names: 52786754

Gene position: 2910238-2908934 (Counterclockwise)

Preceding gene: 52786755

Following gene: 52786753

Centisome position: 68.92

GC content: 47.13

Gene sequence:

>1305_bases
GTGAAAAGGTTCCTTTCATCTATCTTTATGGTCACGGTCGCTGTATGTTTGCTTTTATCGGGGTGCAAGGCGAGTCCTGC
CTCCGATCAAGCGGACGGCACCGAACTGACATTTTGGACATTCAACGGCCTTCATGAACAGTTTTATGCTGAGATGGTGA
AAGAATGGAACAAAAAGTATCCCGAGCGAAAAATCAAATTAAATACAGTGGTGTATCCGTATGGACAGATGCATGACAAT
TTATCTATCTCGCTTTTAGCCGGGAAAGGGGTTCCAGATATTGCCGATGTTGAGCTGGGGCGCTATTCGAACTTTTTGAA
GGGCTCTGACATTCCTCTTACCGATTTAACGCCGCTTGTGGAGGACGAACGCGACAAGTTTGTTGAAGCGAGGCTGACGC
TCTACAGCAAGAACGGCAAGCTTTACGGACTTGACACACATGTCGGAACTACCGTGATGTATTACAACATGGAAATGATG
AATAAAGCAGGCGTTGATCCGGACGACATCAAAACATGGGAAGATTACAGGGAAGCGGGCAAAAAGGTCGTCAAAGCTCT
CGGAAAGCCGATGACGACGATTGAAACGACCGACCCGAATTCATTTCTGCCGCTGGTTTCCCAGCAGGGATCCGGTTACT
TTGATGAGCAGGGGCGGTTGACATTAAACAATGAGACAAACGTGAAAACGCTCGAATTTTTAAAGACTTTAATTGAGAAA
GACAAAATTGCCGTCACAACGCCCGGAGGCAATCATCACAGTGAAGAGTATTACGGATTTATGAACCAAGGCGGCGCGGC
GTCTGTCTTAATGCCGATCTGGTATATGGGCCGTTTTTTGGATTATATGCCTGACTTGAAAGGGAAAATCGCGATCAGAC
CGCTGCCGGCATGGGAAGAAGGGGGAGACCGCTCAGCGGGAATGGGCGGAACGGCCACCGTGATTCCAAAACAGGCGAAA
CAGGTCGATCTGGCCAAGGATTTCTTGAAATTTGCCAAAGCGTCAAAAGAAGGCAACATCAAGCTGTGGACCGTGCTCGG
GTTCGATCCGCTCAGATGGGATGTGTGGGACTCGGACGAATTGAAAAAACCAAATCAATATACAGAATACTTTCAAAACG
GACAACACATCTTTTCCGTGCTTCTTGACATAAAGGATGAGATCAATCCGCTTTACCTTACTGAGGATTATGCGAAGACT
TCCGATCTCGTCAACAGAAACATACTGTACGAAGCGCTCAAAACGAAGAGCAAAACACCGAAAGAAGCATTGGACAAAGC
AGCAGCTGAAGTGAAAGGGCAATAG

Upstream 100 bases:

>100_bases
ATCAGCTCAGAGACCGGTATACGGGACTGAAAATCATCAATCAATACGGCCTTTTGCCGGGGCTTTTAGGCAAAGGACCA
GGCGTGAAAGGGGTTAAAAT

Downstream 100 bases:

>100_bases
TCTTTCATTACTGTAAAGCGAGGCGATAACTTGAAGACTGTTAAAACAGATACAGTGCATTCGTTTCCGCCGGTGAGCAG
AAAAAGAAAGATCAGACGTT

Product: AraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKRFLSSIFMVTVAVCLLLSGCKASPASDQADGTELTFWTFNGLHEQFYAEMVKEWNKKYPERKIKLNTVVYPYGQMHDN
LSISLLAGKGVPDIADVELGRYSNFLKGSDIPLTDLTPLVEDERDKFVEARLTLYSKNGKLYGLDTHVGTTVMYYNMEMM
NKAGVDPDDIKTWEDYREAGKKVVKALGKPMTTIETTDPNSFLPLVSQQGSGYFDEQGRLTLNNETNVKTLEFLKTLIEK
DKIAVTTPGGNHHSEEYYGFMNQGGAASVLMPIWYMGRFLDYMPDLKGKIAIRPLPAWEEGGDRSAGMGGTATVIPKQAK
QVDLAKDFLKFAKASKEGNIKLWTVLGFDPLRWDVWDSDELKKPNQYTEYFQNGQHIFSVLLDIKDEINPLYLTEDYAKT
SDLVNRNILYEALKTKSKTPKEALDKAAAEVKGQ

Sequences:

>Translated_434_residues
MKRFLSSIFMVTVAVCLLLSGCKASPASDQADGTELTFWTFNGLHEQFYAEMVKEWNKKYPERKIKLNTVVYPYGQMHDN
LSISLLAGKGVPDIADVELGRYSNFLKGSDIPLTDLTPLVEDERDKFVEARLTLYSKNGKLYGLDTHVGTTVMYYNMEMM
NKAGVDPDDIKTWEDYREAGKKVVKALGKPMTTIETTDPNSFLPLVSQQGSGYFDEQGRLTLNNETNVKTLEFLKTLIEK
DKIAVTTPGGNHHSEEYYGFMNQGGAASVLMPIWYMGRFLDYMPDLKGKIAIRPLPAWEEGGDRSAGMGGTATVIPKQAK
QVDLAKDFLKFAKASKEGNIKLWTVLGFDPLRWDVWDSDELKKPNQYTEYFQNGQHIFSVLLDIKDEINPLYLTEDYAKT
SDLVNRNILYEALKTKSKTPKEALDKAAAEVKGQ
>Mature_434_residues
MKRFLSSIFMVTVAVCLLLSGCKASPASDQADGTELTFWTFNGLHEQFYAEMVKEWNKKYPERKIKLNTVVYPYGQMHDN
LSISLLAGKGVPDIADVELGRYSNFLKGSDIPLTDLTPLVEDERDKFVEARLTLYSKNGKLYGLDTHVGTTVMYYNMEMM
NKAGVDPDDIKTWEDYREAGKKVVKALGKPMTTIETTDPNSFLPLVSQQGSGYFDEQGRLTLNNETNVKTLEFLKTLIEK
DKIAVTTPGGNHHSEEYYGFMNQGGAASVLMPIWYMGRFLDYMPDLKGKIAIRPLPAWEEGGDRSAGMGGTATVIPKQAK
QVDLAKDFLKFAKASKEGNIKLWTVLGFDPLRWDVWDSDELKKPNQYTEYFQNGQHIFSVLLDIKDEINPLYLTEDYAKT
SDLVNRNILYEALKTKSKTPKEALDKAAAEVKGQ

Specific function: Part of the binding-protein-dependent transport system for L-arabinose [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48912; Mature: 48912

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLSSIFMVTVAVCLLLSGCKASPASDQADGTELTFWTFNGLHEQFYAEMVKEWNKKY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHC
PERKIKLNTVVYPYGQMHDNLSISLLAGKGVPDIADVELGRYSNFLKGSDIPLTDLTPLV
CCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHCCHHHHHHHCCCCCCCHHCCCHHH
EDERDKFVEARLTLYSKNGKLYGLDTHVGTTVMYYNMEMMNKAGVDPDDIKTWEDYREAG
HHHHHHHHHHEEEEEECCCEEEEEECCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHH
KKVVKALGKPMTTIETTDPNSFLPLVSQQGSGYFDEQGRLTLNNETNVKTLEFLKTLIEK
HHHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC
DKIAVTTPGGNHHSEEYYGFMNQGGAASVLMPIWYMGRFLDYMPDLKGKIAIRPLPAWEE
CCEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
GGDRSAGMGGTATVIPKQAKQVDLAKDFLKFAKASKEGNIKLWTVLGFDPLRWDVWDSDE
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCHH
LKKPNQYTEYFQNGQHIFSVLLDIKDEINPLYLTEDYAKTSDLVNRNILYEALKTKSKTP
CCCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCH
KEALDKAAAEVKGQ
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKRFLSSIFMVTVAVCLLLSGCKASPASDQADGTELTFWTFNGLHEQFYAEMVKEWNKKY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHC
PERKIKLNTVVYPYGQMHDNLSISLLAGKGVPDIADVELGRYSNFLKGSDIPLTDLTPLV
CCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHCCHHHHHHHCCCCCCCHHCCCHHH
EDERDKFVEARLTLYSKNGKLYGLDTHVGTTVMYYNMEMMNKAGVDPDDIKTWEDYREAG
HHHHHHHHHHEEEEEECCCEEEEEECCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHH
KKVVKALGKPMTTIETTDPNSFLPLVSQQGSGYFDEQGRLTLNNETNVKTLEFLKTLIEK
HHHHHHHCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCC
DKIAVTTPGGNHHSEEYYGFMNQGGAASVLMPIWYMGRFLDYMPDLKGKIAIRPLPAWEE
CCEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
GGDRSAGMGGTATVIPKQAKQVDLAKDFLKFAKASKEGNIKLWTVLGFDPLRWDVWDSDE
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCHH
LKKPNQYTEYFQNGQHIFSVLLDIKDEINPLYLTEDYAKTSDLVNRNILYEALKTKSKTP
CCCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCH
KEALDKAAAEVKGQ
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639 [H]