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The map label for this gene is dppC [H]

Identifier: 52786267

GI number: 52786267

Start: 2450319

End: 2451140

Strand: Direct

Name: dppC [H]

Synonym: BLi02529

Alternate gene names: 52786267

Gene position: 2450319-2451140 (Clockwise)

Preceding gene: 52786266

Following gene: 52786268

Centisome position: 58.03

GC content: 51.22

Gene sequence:

>822_bases
ATGAGAAAAAACGTATTTCGATCTAAAACAGGACTATGGTTTGTGCTGCTGTTTTCCGCGGCGCTGTTCACCGTCCCCTT
CTTTTTGCCGTTCGATCCGCTCCGCACAGATATGGCCAACCGTCTTCAGCCGATCAGTATGCAGCATTGGCTCGGAACCG
ACCATTTGGGCAGAGATATATTTTCCCGGATGGTCGCCGGTGCGAAAGCGACGGTCGGCACCGCCTTGGGCGCGATTCTG
ATTTCCGTTTTCATAGGTGTTCCTGTCGGGCTTGTCTCCGGGTTTTTCGGCAGACGGCTGGACCGGATGATGATGAGAAT
TGTTGACGCGGTTATGGCTTTTCCGGACTATATTGTCGCGATTGTTTTAAGCGGTTTGCTTGGTCCGGGGCTGATGAACT
TAATATTGGCCGTCGTCGCTGTCAAATGGGTCGGCTATGCAAGGCTGGTCCGCAGCACGGTTTTTTCGGAAAAACAAAAA
GATTACATCGCCTTGGCCGAGCTTACCGGTTTAAGCTCCGGGGCGATTTTAAAAAAGCACCTGCTGCCCCATGTTCTCGG
CAACCTTTCCGTACTTGCGACACTTGATATCGGAAAAACGGTGTTAATGATTGCTGCCCTGTCCTATATCGGCCTGGGTG
CTCAGCCTCCATACCCGGAATGGGGCGCCATGCTGAACGACGGAAAACATTACTTCTTGCATGCGCCTCAGCTTATGGTG
ATTCCCGGTCTTGCGATCATGTTCATCGTTCTGTTGTCCAACCTGTACGGTGATCGTTTAAGGGACAGGTTTGACGTCAA
ACACAAGAAAGGAGTTTCTTAG

Upstream 100 bases:

>100_bases
TTCTTTTCATGGGGATCGCGGTTGTCCTGATCAATCTTTTAGTCGACCTCTCTTATCGGTACCTCAATCCGGAAATTCGC
TTAAAGGAGGCTGGTCGCCG

Downstream 100 bases:

>100_bases
CATGCCGATGTTATCCATTGAGGACTTATCAATCAGCTCCCGGCAGCACACCATTGTCAAAAATGCCTCCTTCTCGATTC
ATGAAGGGGAATGGTTCGCG

Product: hypothetical protein

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRKNVFRSKTGLWFVLLFSAALFTVPFFLPFDPLRTDMANRLQPISMQHWLGTDHLGRDIFSRMVAGAKATVGTALGAIL
ISVFIGVPVGLVSGFFGRRLDRMMMRIVDAVMAFPDYIVAIVLSGLLGPGLMNLILAVVAVKWVGYARLVRSTVFSEKQK
DYIALAELTGLSSGAILKKHLLPHVLGNLSVLATLDIGKTVLMIAALSYIGLGAQPPYPEWGAMLNDGKHYFLHAPQLMV
IPGLAIMFIVLLSNLYGDRLRDRFDVKHKKGVS

Sequences:

>Translated_273_residues
MRKNVFRSKTGLWFVLLFSAALFTVPFFLPFDPLRTDMANRLQPISMQHWLGTDHLGRDIFSRMVAGAKATVGTALGAIL
ISVFIGVPVGLVSGFFGRRLDRMMMRIVDAVMAFPDYIVAIVLSGLLGPGLMNLILAVVAVKWVGYARLVRSTVFSEKQK
DYIALAELTGLSSGAILKKHLLPHVLGNLSVLATLDIGKTVLMIAALSYIGLGAQPPYPEWGAMLNDGKHYFLHAPQLMV
IPGLAIMFIVLLSNLYGDRLRDRFDVKHKKGVS
>Mature_273_residues
MRKNVFRSKTGLWFVLLFSAALFTVPFFLPFDPLRTDMANRLQPISMQHWLGTDHLGRDIFSRMVAGAKATVGTALGAIL
ISVFIGVPVGLVSGFFGRRLDRMMMRIVDAVMAFPDYIVAIVLSGLLGPGLMNLILAVVAVKWVGYARLVRSTVFSEKQK
DYIALAELTGLSSGAILKKHLLPHVLGNLSVLATLDIGKTVLMIAALSYIGLGAQPPYPEWGAMLNDGKHYFLHAPQLMV
IPGLAIMFIVLLSNLYGDRLRDRFDVKHKKGVS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789889, Length=242, Percent_Identity=41.7355371900826, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787054, Length=269, Percent_Identity=39.7769516728625, Blast_Score=191, Evalue=3e-50,
Organism=Escherichia coli, GI1787760, Length=242, Percent_Identity=38.8429752066116, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789964, Length=225, Percent_Identity=39.1111111111111, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1787549, Length=241, Percent_Identity=34.8547717842324, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787498, Length=253, Percent_Identity=32.8063241106719, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1788505, Length=223, Percent_Identity=27.8026905829596, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29996; Mature: 29996

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]