| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
Click here to switch to the map view.
The map label for this gene is dppD [H]
Identifier: 52786268
GI number: 52786268
Start: 2451142
End: 2451984
Strand: Direct
Name: dppD [H]
Synonym: BLi02530
Alternate gene names: 52786268
Gene position: 2451142-2451984 (Clockwise)
Preceding gene: 52786267
Following gene: 52786269
Centisome position: 58.05
GC content: 54.21
Gene sequence:
>843_bases ATGCCGATGTTATCCATTGAGGACTTATCAATCAGCTCCCGGCAGCACACCATTGTCAAAAATGCCTCCTTCTCGATTCA TGAAGGGGAATGGTTCGCGCTGCTCGGGGAAAGCGGCAGCGGAAAGAGCCTGACCGCTTCGGCCATAGCCGGGCTGCTTC CGGACGGACTAACGGTGACCGGCGGAGACGTGATATTTGAAGGCCAACAGATGCTTCAAGCCGGACGCAAAGCACTCCGA CGCGTGCGCGGAAAGGATATCGCCTGTATTTTTCAGGACTGTCACGGAGCATTCACCCCTTTTATACGGATCGGCAAACA AATTGACGAAATGGTCAAAACGCATACAGGTTGGTCTAAGAATAAGCGAAGAGAAGCGATTCTCCATGCTTTTCGGGAGG TTTCTCTGCCGGAAAACAGAGTATATGAAAGCTACCCGTTTCAATTGAGCGGAGGGCAGCTGCAAAGGGCCGCGATTGCT CAAGCGATGGTGCTCCGCCCCAAGCTTCTCATCGCAGACGAACCGACGACGGCTTTAGACAGCATCACGGCCGCGGACGT CTTGCAACAGCTCGCCGCGATGCGCGCCAAAACAAACTGCGCCATCCTTTTTATCACTCATGACCTGCGGCTTGTCAAAA GATACGCCGATCAAACCGCCGTCATGCAAAACGGAGAAATCGTCGAAAGCGGCTTAACCGCTGATTTAATTAGACAGCCG GCACATGAATATACGAGGTGTTTATTCGCGGCCATCCCGCCGCTGAAAAATCCTCCGCCAAGGCTGACGGCAGCCCCGCC TGAAACAAAGGAAGCGGTGCTGGCGGGAACAGGAGGTGCGTGA
Upstream 100 bases:
>100_bases CCCGGTCTTGCGATCATGTTCATCGTTCTGTTGTCCAACCTGTACGGTGATCGTTTAAGGGACAGGTTTGACGTCAAACA CAAGAAAGGAGTTTCTTAGC
Downstream 100 bases:
>100_bases TGACCCATTCTGCAGAGACCGTTCTTTTTGTCAGCAATCTGACAAAACATTACGCTTGCGGCCACAAAGCGGTTGACAAC GTATCATTCTCCATTCGAAA
Product: hypothetical protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPMLSIEDLSISSRQHTIVKNASFSIHEGEWFALLGESGSGKSLTASAIAGLLPDGLTVTGGDVIFEGQQMLQAGRKALR RVRGKDIACIFQDCHGAFTPFIRIGKQIDEMVKTHTGWSKNKRREAILHAFREVSLPENRVYESYPFQLSGGQLQRAAIA QAMVLRPKLLIADEPTTALDSITAADVLQQLAAMRAKTNCAILFITHDLRLVKRYADQTAVMQNGEIVESGLTADLIRQP AHEYTRCLFAAIPPLKNPPPRLTAAPPETKEAVLAGTGGA
Sequences:
>Translated_280_residues MPMLSIEDLSISSRQHTIVKNASFSIHEGEWFALLGESGSGKSLTASAIAGLLPDGLTVTGGDVIFEGQQMLQAGRKALR RVRGKDIACIFQDCHGAFTPFIRIGKQIDEMVKTHTGWSKNKRREAILHAFREVSLPENRVYESYPFQLSGGQLQRAAIA QAMVLRPKLLIADEPTTALDSITAADVLQQLAAMRAKTNCAILFITHDLRLVKRYADQTAVMQNGEIVESGLTADLIRQP AHEYTRCLFAAIPPLKNPPPRLTAAPPETKEAVLAGTGGA >Mature_279_residues PMLSIEDLSISSRQHTIVKNASFSIHEGEWFALLGESGSGKSLTASAIAGLLPDGLTVTGGDVIFEGQQMLQAGRKALRR VRGKDIACIFQDCHGAFTPFIRIGKQIDEMVKTHTGWSKNKRREAILHAFREVSLPENRVYESYPFQLSGGQLQRAAIAQ AMVLRPKLLIADEPTTALDSITAADVLQQLAAMRAKTNCAILFITHDLRLVKRYADQTAVMQNGEIVESGLTADLIRQPA HEYTRCLFAAIPPLKNPPPRLTAAPPETKEAVLAGTGGA
Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system. Expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI156105685, Length=261, Percent_Identity=34.4827586206897, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI9961252, Length=237, Percent_Identity=32.0675105485232, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI148612844, Length=232, Percent_Identity=32.7586206896552, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI255708477, Length=232, Percent_Identity=31.8965517241379, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI4505771, Length=237, Percent_Identity=32.0675105485232, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI42741659, Length=237, Percent_Identity=31.2236286919831, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI9961250, Length=244, Percent_Identity=31.9672131147541, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI11967971, Length=247, Percent_Identity=25.9109311740891, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI9665248, Length=252, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI21536378, Length=237, Percent_Identity=30.8016877637131, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI11967969, Length=245, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788506, Length=267, Percent_Identity=41.9475655430712, Blast_Score=194, Evalue=6e-51, Organism=Escherichia coli, GI1789963, Length=272, Percent_Identity=38.2352941176471, Blast_Score=179, Evalue=1e-46, Organism=Escherichia coli, GI145693107, Length=267, Percent_Identity=39.3258426966292, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI48994883, Length=258, Percent_Identity=38.3720930232558, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI1787759, Length=272, Percent_Identity=39.7058823529412, Blast_Score=174, Evalue=4e-45, Organism=Escherichia coli, GI1787548, Length=283, Percent_Identity=32.8621908127208, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789962, Length=240, Percent_Identity=36.25, Blast_Score=151, Evalue=5e-38, Organism=Escherichia coli, GI1787500, Length=236, Percent_Identity=38.135593220339, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789032, Length=236, Percent_Identity=36.864406779661, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1789890, Length=236, Percent_Identity=37.7118644067797, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1787547, Length=241, Percent_Identity=34.4398340248963, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=36, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI48994997, Length=251, Percent_Identity=29.8804780876494, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=35.3982300884956, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787758, Length=241, Percent_Identity=29.4605809128631, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1789672, Length=250, Percent_Identity=28, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=33.0357142857143, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788450, Length=232, Percent_Identity=30.6034482758621, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788225, Length=247, Percent_Identity=28.7449392712551, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87081709, Length=231, Percent_Identity=29.004329004329, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1787712, Length=224, Percent_Identity=32.5892857142857, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=30.1801801801802, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786703, Length=222, Percent_Identity=30.6306306306306, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787105, Length=235, Percent_Identity=32.3404255319149, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1790162, Length=250, Percent_Identity=27.6, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI87081791, Length=248, Percent_Identity=27.4193548387097, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787370, Length=238, Percent_Identity=27.3109243697479, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790467, Length=266, Percent_Identity=25.187969924812, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=27.3109243697479, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1788761, Length=246, Percent_Identity=27.6422764227642, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787792, Length=243, Percent_Identity=28.3950617283951, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787112, Length=234, Percent_Identity=31.1965811965812, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790544, Length=249, Percent_Identity=28.1124497991968, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789873, Length=209, Percent_Identity=27.7511961722488, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787164, Length=213, Percent_Identity=29.5774647887324, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786872, Length=217, Percent_Identity=28.110599078341, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787972, Length=236, Percent_Identity=29.2372881355932, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082267, Length=234, Percent_Identity=25.6410256410256, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786654, Length=241, Percent_Identity=29.045643153527, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788644, Length=243, Percent_Identity=28.3950617283951, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790739, Length=241, Percent_Identity=29.4605809128631, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786698, Length=225, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786253, Length=236, Percent_Identity=25.8474576271186, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786803, Length=262, Percent_Identity=26.7175572519084, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786563, Length=225, Percent_Identity=28, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787143, Length=236, Percent_Identity=28.8135593220339, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789586, Length=230, Percent_Identity=25.6521739130435, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788053, Length=210, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1786319, Length=247, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786345, Length=244, Percent_Identity=25, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789991, Length=216, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790534, Length=209, Percent_Identity=28.2296650717703, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI48995001, Length=227, Percent_Identity=25.9911894273128, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17541710, Length=235, Percent_Identity=33.1914893617021, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17569145, Length=225, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25146777, Length=248, Percent_Identity=29.8387096774194, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193208177, Length=252, Percent_Identity=28.968253968254, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193202349, Length=240, Percent_Identity=30, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17565938, Length=249, Percent_Identity=27.3092369477912, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71984940, Length=229, Percent_Identity=29.2576419213974, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193209708, Length=228, Percent_Identity=32.0175438596491, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17511077, Length=230, Percent_Identity=30.4347826086957, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71996550, Length=228, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=238, Percent_Identity=28.1512605042017, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323959, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=236, Percent_Identity=27.1186440677966, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI21357907, Length=232, Percent_Identity=29.3103448275862, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24659289, Length=237, Percent_Identity=30.379746835443, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45551502, Length=184, Percent_Identity=35.3260869565217, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45551501, Length=184, Percent_Identity=35.3260869565217, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357851, Length=184, Percent_Identity=35.3260869565217, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574744, Length=210, Percent_Identity=28.0952380952381, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85724864, Length=228, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24580555, Length=228, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI85816269, Length=228, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24580553, Length=228, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI85726357, Length=98, Percent_Identity=39.7959183673469, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI17136662, Length=92, Percent_Identity=45.6521739130435, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 30456; Mature: 30324
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMLSIEDLSISSRQHTIVKNASFSIHEGEWFALLGESGSGKSLTASAIAGLLPDGLTVT CCCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEE GGDVIFEGQQMLQAGRKALRRVRGKDIACIFQDCHGAFTPFIRIGKQIDEMVKTHTGWSK CCCEEECCHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCC NKRREAILHAFREVSLPENRVYESYPFQLSGGQLQRAAIAQAMVLRPKLLIADEPTTALD HHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHH SITAADVLQQLAAMRAKTNCAILFITHDLRLVKRYADQTAVMQNGEIVESGLTADLIRQP HHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH AHEYTRCLFAAIPPLKNPPPRLTAAPPETKEAVLAGTGGA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure PMLSIEDLSISSRQHTIVKNASFSIHEGEWFALLGESGSGKSLTASAIAGLLPDGLTVT CCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEE GGDVIFEGQQMLQAGRKALRRVRGKDIACIFQDCHGAFTPFIRIGKQIDEMVKTHTGWSK CCCEEECCHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCC NKRREAILHAFREVSLPENRVYESYPFQLSGGQLQRAAIAQAMVLRPKLLIADEPTTALD HHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHH SITAADVLQQLAAMRAKTNCAILFITHDLRLVKRYADQTAVMQNGEIVESGLTADLIRQP HHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH AHEYTRCLFAAIPPLKNPPPRLTAAPPETKEAVLAGTGGA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1766370; 9384377 [H]