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The map label for this gene is drm

Identifier: 52786239

GI number: 52786239

Start: 2429566

End: 2430750

Strand: Reverse

Name: drm

Synonym: BLi02500

Alternate gene names: 52786239

Gene position: 2430750-2429566 (Counterclockwise)

Preceding gene: 52786240

Following gene: 52786238

Centisome position: 57.56

GC content: 49.96

Gene sequence:

>1185_bases
ATGCCTGCATTTGATTATAACCGCGTATTTTTAATAGTAATGGATTCCGTTGGAATCGGCGAGGCGCCTGATGCCGAAAA
ATTTAATGACAAAGGCGCAGATACATTGGGCCACATTGCCGAACACATGGGAGGCATCAGCCTGCCGAACATGGCAAAGC
TCGGGCTCAGCAACATCCGTGAAATCAAAGGCGTCGAAAAGGCGGAAAAGCCGCTTGCCTATTACGGCAAAATGAAAGAA
GCCTCAAACGGAAAAGATACGATGACTGGCCATTGGGAGATTATGGGACTTTACATAGACAAACCTTTCCGGGTGTTTCC
CGAAGGTTTTCCGGACGAATTGATCCACGAACTTGAACAGAAATCCGGAAGAAAAGTGATTGGAAACAAGCCTGCATCAG
GCACTGCGATTTTGGATGAACTCGGTGCGGAGCATATGGAAACCGGCGCGCTGATCGTCTACACCTCAGCAGACTCCGTT
CTGCAGATTGCCGCACACGAAGAAGTCGTGCCTCTCGAGGAATTGTACAAGATCTGCGAGATCGCGCGCGAGCTGACGCT
TGACGAGAAATATATGGTCGGACGCGTTATTGCGAGGCCGTTTGTCGGCAAGCCGGGCGAATTTAAACGGACGCCGAACC
GCCATGATTATGCGCTGAAGCCGTTTGACAGAACCGTGATGAATGAATTGAAAGATGACAGCTTTGATGTGATTGCGATC
GGCAAAATCTCCGATATCTACGACGGCGAGGGCATTACGGAATCGCTCAGAACGAAATCGAATATGGACGGGATGGACAA
GCTGGTGCAAACGCTTGACAAAGGTTTTACTGGGATCAGCTTTGTAAACCTCGTGGACTTTGATGCGCTGTTCGGACACC
GCCGCGATCCGGAAGGATACGGAAAAGCGCTCGAAGAGTTCGACGCGCGCCTTCCTGAAGTATTTGAAAAGATGCGCGAA
GATGATCTGCTCATCATTACCGCCGACCACGGCAATGATCCGGTTCACCATGGCACTGATCATACAAGGGAGTACGTTCC
GCTTCTTGTATACAGCAAAAAACACGAAAAGCCTGGGGCGCTTCCGCTCGCAGATACATTCGCGGACATCGGCGCAACGA
TCGCCGACAACTTTAAAACGAATATGCCAAAGTACGGAAAAAGCTTTTTATCCCTGCTGAAATAG

Upstream 100 bases:

>100_bases
TGTGTAAACGGTTTATACTTGGCTAATAGCGGTATTTTGGTTTTTTTATGCCAAGCGTGACAGCCTATAGCTGACAGAAA
GAAAAAAAGGAGGCCGACAA

Downstream 100 bases:

>100_bases
GAGGAAACGACGTGAAACAGATGATTGCAAATGCCGCAGACTATATTAAAAGCAAAACGGAAATCAAACCTGCGGTCGGC
CTGATATTGGGATCCGGCCT

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPAFDYNRVFLIVMDSVGIGEAPDAEKFNDKGADTLGHIAEHMGGISLPNMAKLGLSNIREIKGVEKAEKPLAYYGKMKE
ASNGKDTMTGHWEIMGLYIDKPFRVFPEGFPDELIHELEQKSGRKVIGNKPASGTAILDELGAEHMETGALIVYTSADSV
LQIAAHEEVVPLEELYKICEIARELTLDEKYMVGRVIARPFVGKPGEFKRTPNRHDYALKPFDRTVMNELKDDSFDVIAI
GKISDIYDGEGITESLRTKSNMDGMDKLVQTLDKGFTGISFVNLVDFDALFGHRRDPEGYGKALEEFDARLPEVFEKMRE
DDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHEKPGALPLADTFADIGATIADNFKTNMPKYGKSFLSLLK

Sequences:

>Translated_394_residues
MPAFDYNRVFLIVMDSVGIGEAPDAEKFNDKGADTLGHIAEHMGGISLPNMAKLGLSNIREIKGVEKAEKPLAYYGKMKE
ASNGKDTMTGHWEIMGLYIDKPFRVFPEGFPDELIHELEQKSGRKVIGNKPASGTAILDELGAEHMETGALIVYTSADSV
LQIAAHEEVVPLEELYKICEIARELTLDEKYMVGRVIARPFVGKPGEFKRTPNRHDYALKPFDRTVMNELKDDSFDVIAI
GKISDIYDGEGITESLRTKSNMDGMDKLVQTLDKGFTGISFVNLVDFDALFGHRRDPEGYGKALEEFDARLPEVFEKMRE
DDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHEKPGALPLADTFADIGATIADNFKTNMPKYGKSFLSLLK
>Mature_393_residues
PAFDYNRVFLIVMDSVGIGEAPDAEKFNDKGADTLGHIAEHMGGISLPNMAKLGLSNIREIKGVEKAEKPLAYYGKMKEA
SNGKDTMTGHWEIMGLYIDKPFRVFPEGFPDELIHELEQKSGRKVIGNKPASGTAILDELGAEHMETGALIVYTSADSVL
QIAAHEEVVPLEELYKICEIARELTLDEKYMVGRVIARPFVGKPGEFKRTPNRHDYALKPFDRTVMNELKDDSFDVIAIG
KISDIYDGEGITESLRTKSNMDGMDKLVQTLDKGFTGISFVNLVDFDALFGHRRDPEGYGKALEEFDARLPEVFEKMRED
DLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHEKPGALPLADTFADIGATIADNFKTNMPKYGKSFLSLLK

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=407, Percent_Identity=46.6830466830467, Blast_Score=337, Evalue=1e-93,
Organism=Escherichia coli, GI1789781, Length=422, Percent_Identity=27.9620853080569, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_BACLD (Q65HT9)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079658.1
- RefSeq:   YP_092068.1
- ProteinModelPortal:   Q65HT9
- SMR:   Q65HT9
- STRING:   Q65HT9
- EnsemblBacteria:   EBBACT00000055190
- EnsemblBacteria:   EBBACT00000059642
- GeneID:   3027976
- GeneID:   3097551
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02500
- KEGG:   bli:BL00772
- NMPDR:   fig|279010.5.peg.345
- eggNOG:   COG1015
- GeneTree:   EBGT00050000001645
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- ProtClustDB:   PRK05362
- BioCyc:   BLIC279010-1:BLI02500-MONOMER
- BioCyc:   BLIC279010:BL00772-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 43900; Mature: 43768

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFDYNRVFLIVMDSVGIGEAPDAEKFNDKGADTLGHIAEHMGGISLPNMAKLGLSNIR
CCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
EIKGVEKAEKPLAYYGKMKEASNGKDTMTGHWEIMGLYIDKPFRVFPEGFPDELIHELEQ
HHHCHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHCCCCCCCHHHHHHHHH
KSGRKVIGNKPASGTAILDELGAEHMETGALIVYTSADSVLQIAAHEEVVPLEELYKICE
HCCCEEECCCCCCCHHHHHHHCHHHHCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHH
IARELTLDEKYMVGRVIARPFVGKPGEFKRTPNRHDYALKPFDRTVMNELKDDSFDVIAI
HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE
GKISDIYDGEGITESLRTKSNMDGMDKLVQTLDKGFTGISFVNLVDFDALFGHRRDPEGY
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHH
GKALEEFDARLPEVFEKMREDDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHEKPGA
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHEEEEEEECCCCCCCC
LPLADTFADIGATIADNFKTNMPKYGKSFLSLLK
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
>Mature Secondary Structure 
PAFDYNRVFLIVMDSVGIGEAPDAEKFNDKGADTLGHIAEHMGGISLPNMAKLGLSNIR
CCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
EIKGVEKAEKPLAYYGKMKEASNGKDTMTGHWEIMGLYIDKPFRVFPEGFPDELIHELEQ
HHHCHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHCCCCCCCHHHHHHHHH
KSGRKVIGNKPASGTAILDELGAEHMETGALIVYTSADSVLQIAAHEEVVPLEELYKICE
HCCCEEECCCCCCCHHHHHHHCHHHHCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHH
IARELTLDEKYMVGRVIARPFVGKPGEFKRTPNRHDYALKPFDRTVMNELKDDSFDVIAI
HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE
GKISDIYDGEGITESLRTKSNMDGMDKLVQTLDKGFTGISFVNLVDFDALFGHRRDPEGY
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHH
GKALEEFDARLPEVFEKMREDDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHEKPGA
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHEEEEEEECCCCCCCC
LPLADTFADIGATIADNFKTNMPKYGKSFLSLLK
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA