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The map label for this gene is rapA [H]

Identifier: 52785341

GI number: 52785341

Start: 1543864

End: 1544247

Strand: Reverse

Name: rapA [H]

Synonym: BLi01577

Alternate gene names: 52785341

Gene position: 1544247-1543864 (Counterclockwise)

Preceding gene: 52785342

Following gene: 52785340

Centisome position: 36.57

GC content: 35.42

Gene sequence:

>384_bases
ATGTATCATATATTAAGGGCCTTTAAAATATACAATAATCATGAACTCTACACAGTCCGTAAAATCCAATGTTTATTTGT
TATCGCGGGTAACTATGACGATTTAATGCGCCATGACAAAGCCTTACCCCACCTGGAAAATGCACTTGAATTAGCGATAG
AGATCGACAATAAAAGGCTCATTAGTTCTGCCTATTTTAATATAGCCGACTGTCATGAATGTATGGGAGACATTGATGCA
GCAGTTGAATATGCTGAAAAAGCCGTAGAGATTAATCTAAAAGAAGAATATAACAACCTACCACAATCATTATATTACTC
TACTCAACTTCTTTTTAAGCAGAAAAACTACGAGCGCGCAATCGAGATATTTCTTATTGGTTAG

Upstream 100 bases:

>100_bases
TCGAAACGCAGAAAAACAGTTGGCTCTCATTACGATGTTATAGAACAAGCCGAGTTTCACTTTAAAATGGCTGAAGCATA
CTACATCATGAAACAGACAC

Downstream 100 bases:

>100_bases
ACAAACAGCTCGAAAATTCAACGATACCCTATTCACTTCTCTATTTGAATATCTTGAGGCGTTATATATCTATTCTGTGA
ATAAAGAAGAGATTTTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Glucose starvation-inducible protein A; Stage 0 sporulation protein L [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MYHILRAFKIYNNHELYTVRKIQCLFVIAGNYDDLMRHDKALPHLENALELAIEIDNKRLISSAYFNIADCHECMGDIDA
AVEYAEKAVEINLKEEYNNLPQSLYYSTQLLFKQKNYERAIEIFLIG

Sequences:

>Translated_127_residues
MYHILRAFKIYNNHELYTVRKIQCLFVIAGNYDDLMRHDKALPHLENALELAIEIDNKRLISSAYFNIADCHECMGDIDA
AVEYAEKAVEINLKEEYNNLPQSLYYSTQLLFKQKNYERAIEIFLIG
>Mature_127_residues
MYHILRAFKIYNNHELYTVRKIQCLFVIAGNYDDLMRHDKALPHLENALELAIEIDNKRLISSAYFNIADCHECMGDIDA
AVEYAEKAVEINLKEEYNNLPQSLYYSTQLLFKQKNYERAIEIFLIG

Specific function: Prevents sporulation by dephosphorylating Spo0F [H]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 14923; Mature: 14923

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHILRAFKIYNNHELYTVRKIQCLFVIAGNYDDLMRHDKALPHLENALELAIEIDNKRL
CHHHHEEHHHCCCCCEEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHEEEEEECCCEE
ISSAYFNIADCHECMGDIDAAVEYAEKAVEINLKEEYNNLPQSLYYSTQLLFKQKNYERA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCE
IEIFLIG
EEEEEEC
>Mature Secondary Structure
MYHILRAFKIYNNHELYTVRKIQCLFVIAGNYDDLMRHDKALPHLENALELAIEIDNKRL
CHHHHEEHHHCCCCCEEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHEEEEEECCCEE
ISSAYFNIADCHECMGDIDAAVEYAEKAVEINLKEEYNNLPQSLYYSTQLLFKQKNYERA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCE
IEIFLIG
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1378051; 9384377; 9579062; 1624431 [H]