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The map label for this gene is rapH [H]

Identifier: 52785342

GI number: 52785342

Start: 1544305

End: 1544712

Strand: Reverse

Name: rapH [H]

Synonym: BLi01578

Alternate gene names: 52785342

Gene position: 1544712-1544305 (Counterclockwise)

Preceding gene: 52785343

Following gene: 52785341

Centisome position: 36.58

GC content: 35.05

Gene sequence:

>408_bases
GTGAAACAGTTAATACCCTCGTCAAAAGTCGGAGTGAAAATCCACGAATGGTATAAAATGATAAGAGAGTTTAGCGTACC
GGATGCAGAGGCTTTAAAAGAAGAAGTAGAGAAGGAAATTAATCAAATGGAAGAAGATCAGGACTTACTCCTTTACTATC
AGTTGATGTGTTTTAGACATCAATTAATGTTAGAATATTTAGAACCTACTAACAAAAGAAAACAAGGACAATCAATAAAC
AAATTGTTGGCCCAAATCGAGGAGCCTCGAAGAGATTTAAATGGCCTCCTTAGTTACTACTCATTTTTCTTTAGGGGCAT
GTATGAATTTGAGAAAAAACAGTACATCAAAGCAATAGAGTTTTATCGAAACGCAGAAAAACAGTTGGCTCTCATTACGA
TGTTATAG

Upstream 100 bases:

>100_bases
TTTATTGCGGCATACCGAAAATTTTTTCACTTTTCAACCTATTATCACCCGAATTATAGTAATATATTTACAAAAATGAA
ATAAAAAGGTATAGGCGGAA

Downstream 100 bases:

>100_bases
AACAAGCCGAGTTTCACTTTAAAATGGCTGAAGCATACTACATCATGAAACAGACACATGTATCATATATTAAGGGCCTT
TAAAATATACAATAATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: PSP28 [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKQLIPSSKVGVKIHEWYKMIREFSVPDAEALKEEVEKEINQMEEDQDLLLYYQLMCFRHQLMLEYLEPTNKRKQGQSIN
KLLAQIEEPRRDLNGLLSYYSFFFRGMYEFEKKQYIKAIEFYRNAEKQLALITML

Sequences:

>Translated_135_residues
MKQLIPSSKVGVKIHEWYKMIREFSVPDAEALKEEVEKEINQMEEDQDLLLYYQLMCFRHQLMLEYLEPTNKRKQGQSIN
KLLAQIEEPRRDLNGLLSYYSFFFRGMYEFEKKQYIKAIEFYRNAEKQLALITML
>Mature_135_residues
MKQLIPSSKVGVKIHEWYKMIREFSVPDAEALKEEVEKEINQMEEDQDLLLYYQLMCFRHQLMLEYLEPTNKRKQGQSIN
KLLAQIEEPRRDLNGLLSYYSFFFRGMYEFEKKQYIKAIEFYRNAEKQLALITML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16372; Mature: 16372

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLIPSSKVGVKIHEWYKMIREFSVPDAEALKEEVEKEINQMEEDQDLLLYYQLMCFRH
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QLMLEYLEPTNKRKQGQSINKLLAQIEEPRRDLNGLLSYYSFFFRGMYEFEKKQYIKAIE
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRNAEKQLALITML
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQLIPSSKVGVKIHEWYKMIREFSVPDAEALKEEVEKEINQMEEDQDLLLYYQLMCFRH
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QLMLEYLEPTNKRKQGQSINKLLAQIEEPRRDLNGLLSYYSFFFRGMYEFEKKQYIKAIE
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRNAEKQLALITML
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]