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The map label for this gene is rapA [H]

Identifier: 52785340

GI number: 52785340

Start: 1543590

End: 1543871

Strand: Reverse

Name: rapA [H]

Synonym: BLi01576

Alternate gene names: 52785340

Gene position: 1543871-1543590 (Counterclockwise)

Preceding gene: 52785341

Following gene: 52785335

Centisome position: 36.56

GC content: 32.27

Gene sequence:

>282_bases
TTGGTTAGACAAACAGCTCGAAAATTCAACGATACCCTATTCACTTCTCTATTTGAATATCTTGAGGCGTTATATATCTA
TTCTGTGAATAAAGAAGAGATTTTAGAGGTATTTAAATACTTGGAGGAGAATAAAATATTTGCATACATAGAAGAGCTTT
CGCTTGAAGTCTCTAACCAATACCTTGAAAGAAAAGACCATAGAAACTCAATCGAGTTCCTTCAAAAAATGATGTATGGG
CAAACAAAAATTAAAAAAGGGGAGTGTCTCTATGAGTATTAA

Upstream 100 bases:

>100_bases
CTAAAAGAAGAATATAACAACCTACCACAATCATTATATTACTCTACTCAACTTCTTTTTAAGCAGAAAAACTACGAGCG
CGCAATCGAGATATTTCTTA

Downstream 100 bases:

>100_bases
AAAGCTCGTTATTCCCATTTTAGCCGCCGCGTTATTAACGATGGGTATTAGCGTTGTTTCAGCAACCGACCAGTCTGACG
GCGTATATCAAATCGCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: Glucose starvation-inducible protein A; Stage 0 sporulation protein L [H]

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVRQTARKFNDTLFTSLFEYLEALYIYSVNKEEILEVFKYLEENKIFAYIEELSLEVSNQYLERKDHRNSIEFLQKMMYG
QTKIKKGECLYEY

Sequences:

>Translated_93_residues
MVRQTARKFNDTLFTSLFEYLEALYIYSVNKEEILEVFKYLEENKIFAYIEELSLEVSNQYLERKDHRNSIEFLQKMMYG
QTKIKKGECLYEY
>Mature_93_residues
MVRQTARKFNDTLFTSLFEYLEALYIYSVNKEEILEVFKYLEENKIFAYIEELSLEVSNQYLERKDHRNSIEFLQKMMYG
QTKIKKGECLYEY

Specific function: Prevents sporulation by dephosphorylating Spo0F [H]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 11390; Mature: 11390

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQTARKFNDTLFTSLFEYLEALYIYSVNKEEILEVFKYLEENKIFAYIEELSLEVSNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
YLERKDHRNSIEFLQKMMYGQTKIKKGECLYEY
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRQTARKFNDTLFTSLFEYLEALYIYSVNKEEILEVFKYLEENKIFAYIEELSLEVSNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
YLERKDHRNSIEFLQKMMYGQTKIKKGECLYEY
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1378051; 9384377; 9579062; 1624431 [H]