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The map label for this gene is yhjR [H]

Identifier: 52785253

GI number: 52785253

Start: 1461851

End: 1462702

Strand: Reverse

Name: yhjR [H]

Synonym: BLi01488

Alternate gene names: 52785253

Gene position: 1462702-1461851 (Counterclockwise)

Preceding gene: 52785255

Following gene: 52785252

Centisome position: 34.64

GC content: 37.21

Gene sequence:

>852_bases
ATGCCTCCCGACAGAAAACTAATTAATGACATTCACAAGGCAATTAACGGAGAGCATAGCGCCATTCTCTGCTATAAGCA
AATAGCCGAAAATGCCCCCACAGAAGATATAAGAAAACAAATACTTGAAATTAGACAAGATGAGCAACGACATTTTGAAG
AGTTTAGCAGAATTTTCACTAACCTGACAGGCAAAAAGCCAATCCCCATAATCATAGAAGAATGCCCTAAAAAGTATAGA
ACAAGTCTAGAGTCTGCTTTTAAAGATGAGCAGGAGACAGTCGATTTTTATTTAGATTTAGCAGACCGAATACAAAATCA
GTCAATTAAAAAGGTTTTTCAGCGTGCAGCAGCTGATGAACAAAATCATGCTGTATGGTTCTTATTTTTTTTAAATACAT
CGTCTACACAACAAACACGTCAAGTTAATTATGGGGCAAAAGGAGCGTTAAATTCCGGTAGGCTCACCTTACCTCAAATG
CTTACCTTTGCCATTCAGGATGAGTACTTAGCTCAAGCAAGATACAATGAAATTCTAAGAAACTTCGGGGATATTCGAAC
CTTTGTCCAAATTAAAGAAGCCGAATTACGGCATATCAATGCATTACTTTCTCTTTTTGAACGATACCAAGTACAGATAC
CTAAAGACACCTCTCAATTATATGTCACTACACCAGTAACCCTTAAGGATGCATATGCTTCTGGGGTACAAGGAGAAATT
GATAATATCGCCATGTATAACAAGTTTCTAACTTTTGATCTTCCAGCAGATGCAAGAACAGTTTTTACTCAATTACGCAA
CGCATCACTAAATCATTTAGAGGCTTTCCGAAGAGGTCTTGAGAGAAATTAA

Upstream 100 bases:

>100_bases
GGCATATGCTACATTACTAAATACCGCAAATAGGACGGTGAAATTGGTGTACCCTTATCCTGTTTATAATCCTTATATAA
GGAATAGTGATGATTTTCGT

Downstream 100 bases:

>100_bases
ACTTTATGAATTGATCTTGCAAAAAGAACATATCAATTTTAAAAGTGCATAGGCAAACACCATTGACTTTGAACAAAAAT
TGGTATCTAAGTACATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MPPDRKLINDIHKAINGEHSAILCYKQIAENAPTEDIRKQILEIRQDEQRHFEEFSRIFTNLTGKKPIPIIIEECPKKYR
TSLESAFKDEQETVDFYLDLADRIQNQSIKKVFQRAAADEQNHAVWFLFFLNTSSTQQTRQVNYGAKGALNSGRLTLPQM
LTFAIQDEYLAQARYNEILRNFGDIRTFVQIKEAELRHINALLSLFERYQVQIPKDTSQLYVTTPVTLKDAYASGVQGEI
DNIAMYNKFLTFDLPADARTVFTQLRNASLNHLEAFRRGLERN

Sequences:

>Translated_283_residues
MPPDRKLINDIHKAINGEHSAILCYKQIAENAPTEDIRKQILEIRQDEQRHFEEFSRIFTNLTGKKPIPIIIEECPKKYR
TSLESAFKDEQETVDFYLDLADRIQNQSIKKVFQRAAADEQNHAVWFLFFLNTSSTQQTRQVNYGAKGALNSGRLTLPQM
LTFAIQDEYLAQARYNEILRNFGDIRTFVQIKEAELRHINALLSLFERYQVQIPKDTSQLYVTTPVTLKDAYASGVQGEI
DNIAMYNKFLTFDLPADARTVFTQLRNASLNHLEAFRRGLERN
>Mature_282_residues
PPDRKLINDIHKAINGEHSAILCYKQIAENAPTEDIRKQILEIRQDEQRHFEEFSRIFTNLTGKKPIPIIIEECPKKYRT
SLESAFKDEQETVDFYLDLADRIQNQSIKKVFQRAAADEQNHAVWFLFFLNTSSTQQTRQVNYGAKGALNSGRLTLPQML
TFAIQDEYLAQARYNEILRNFGDIRTFVQIKEAELRHINALLSLFERYQVQIPKDTSQLYVTTPVTLKDAYASGVQGEID
NIAMYNKFLTFDLPADARTVFTQLRNASLNHLEAFRRGLERN

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 32824; Mature: 32692

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPDRKLINDIHKAINGEHSAILCYKQIAENAPTEDIRKQILEIRQDEQRHFEEFSRIFT
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLTGKKPIPIIIEECPKKYRTSLESAFKDEQETVDFYLDLADRIQNQSIKKVFQRAAADE
CCCCCCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
QNHAVWFLFFLNTSSTQQTRQVNYGAKGALNSGRLTLPQMLTFAIQDEYLAQARYNEILR
CCCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NFGDIRTFVQIKEAELRHINALLSLFERYQVQIPKDTSQLYVTTPVTLKDAYASGVQGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCHHHHHHCCCCCCH
DNIAMYNKFLTFDLPADARTVFTQLRNASLNHLEAFRRGLERN
HHHHHHHHEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
PPDRKLINDIHKAINGEHSAILCYKQIAENAPTEDIRKQILEIRQDEQRHFEEFSRIFT
CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLTGKKPIPIIIEECPKKYRTSLESAFKDEQETVDFYLDLADRIQNQSIKKVFQRAAADE
CCCCCCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
QNHAVWFLFFLNTSSTQQTRQVNYGAKGALNSGRLTLPQMLTFAIQDEYLAQARYNEILR
CCCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NFGDIRTFVQIKEAELRHINALLSLFERYQVQIPKDTSQLYVTTPVTLKDAYASGVQGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCHHHHHHCCCCCCH
DNIAMYNKFLTFDLPADARTVFTQLRNASLNHLEAFRRGLERN
HHHHHHHHEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]