Definition | Bacillus licheniformis ATCC 14580, complete genome. |
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Accession | NC_006322 |
Length | 4,222,645 |
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The map label for this gene is thrS [H]
Identifier: 52784711
GI number: 52784711
Start: 938943
End: 940268
Strand: Direct
Name: thrS [H]
Synonym: BLi00937
Alternate gene names: 52784711
Gene position: 938943-940268 (Clockwise)
Preceding gene: 52784710
Following gene: 52784712
Centisome position: 22.24
GC content: 55.05
Gene sequence:
>1326_bases TTGTCAATTCGCATTAAACTGCCTGACGGGTCCGTCAGAGAATTTGAGGAGGAAGCAAGTATTGAAGATGTTGCTGCTTC CATTAGCTGCGGTCTGGAACATGCGGTTGCAGGTAAATTAAACGGAAAGCTTGTAGATTTATCAACTCCGCTTCAGGACG GTGCACTCGTTGAAATTGTCACCCGGGACTCAGCAGAAGGACAGAAGATCGTGCGTGAAAAATCGCGGGGGAAAGGGCGT ATTGTGGCACTTGACGCAGCACGGGGACTGGCGGTCATCGGGATGTATTTGCAGCACTTCGCCTTGAACGAAACGAACGG TTCGATCGTTTCCGGGAATACGACGCTTCTATTTGTGCTTTGCGGCGGAATCTCCTATTCGATCATGGCCGGGCGCATGA TGGACAGAGGAATGGAGCCGGCCGCATTTCGGACGCGGATGCTTGCCCGCGCGGTATTTATCGATATGATAGGATATCTG CTCATCATGCTGAATACTCCGTTCGGGGTGATTTTGCCGGCTTATGCTGCACTTTTTGTGCTGGCATTGGTGCTGATTCG CCGTTCGACGCGTGTGCTCGTTACAACAGCAGCTGTTTTGCTTGCGGTGAGCCCGCCGCTGATGATTCTCGGAGGGAGCG TCCTGTCGGGAGCAAACTTGCTTGGCGATATTGCAGGCGGCCCGATGTCGGCGCTCGCACTTGCACCCGCTTTCGTCGCC GGTATGGCAATCGGGCGCTTTGATCTGACCAGGATGCGTACGGCACTTTCGCTAGTAAGCAGCGGCGCAGTCATGCTTAT CGTCTCTAAGTTATTGGGCGTTTTCGTTCTTCCTTGGCTGAGCCGTTCCTTCGAAGAATGGCTCGTAAGTGTTCAAGGCA CCGCCGGCGCCGAGCCGGATCAGTATGCAATCTGGCCGCACAACGTGGCACCGCCGCTTTGGCACAATCTTCTTTCGATA GCTCCGCACAGTGCGTCAACTTTCCAGACGATGCTGGGGCTTGGGGCTGCCTTTCTGGTTCTAGGAATGGTATGTCTCGT GCCGCAGAAGATTTCTGCAGTGCTAAAGCCGTTCGCGGGAGTCGGACGTGTAGCGTTGACGATGTATGCAGCTCAGTTTG TTGTCATATGGGCTCTTGAAATCTCGGGGGCCAAGTATGATATCGGGGCAATTCCATTCGGTGATCTGTTCGTCGCGGCC GTGGCGACGGTGACAGGGTGGCTGATTGCACGGCTTCCTACCGGTCCGCTCGAGACAGCGATGCGACGCTTTGACCGGGC ATTCAGCAATTTGGGACCCGTCACGGGACCGGCGAGACTGAGATAG
Upstream 100 bases:
>100_bases GTTGATCAAACTTTAGCGACATCTGCCCGCTATATTGAATACAGCATGGCTTCACCTAAATATAGGAAAAGGATTAATTT TTTTTTGAGGAGGAATACAG
Downstream 100 bases:
>100_bases GCGGTCTTCAACATGTTGCCTGAAGGAACCGAGAGGCAGCTCCTTCAGGATTTTAGCCTGTCGAGAGGAATATGCAGTGG ATGAGTTCATGCTGAACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSIRIKLPDGSVREFEEEASIEDVAASISCGLEHAVAGKLNGKLVDLSTPLQDGALVEIVTRDSAEGQKIVREKSRGKGR IVALDAARGLAVIGMYLQHFALNETNGSIVSGNTTLLFVLCGGISYSIMAGRMMDRGMEPAAFRTRMLARAVFIDMIGYL LIMLNTPFGVILPAYAALFVLALVLIRRSTRVLVTTAAVLLAVSPPLMILGGSVLSGANLLGDIAGGPMSALALAPAFVA GMAIGRFDLTRMRTALSLVSSGAVMLIVSKLLGVFVLPWLSRSFEEWLVSVQGTAGAEPDQYAIWPHNVAPPLWHNLLSI APHSASTFQTMLGLGAAFLVLGMVCLVPQKISAVLKPFAGVGRVALTMYAAQFVVIWALEISGAKYDIGAIPFGDLFVAA VATVTGWLIARLPTGPLETAMRRFDRAFSNLGPVTGPARLR
Sequences:
>Translated_441_residues MSIRIKLPDGSVREFEEEASIEDVAASISCGLEHAVAGKLNGKLVDLSTPLQDGALVEIVTRDSAEGQKIVREKSRGKGR IVALDAARGLAVIGMYLQHFALNETNGSIVSGNTTLLFVLCGGISYSIMAGRMMDRGMEPAAFRTRMLARAVFIDMIGYL LIMLNTPFGVILPAYAALFVLALVLIRRSTRVLVTTAAVLLAVSPPLMILGGSVLSGANLLGDIAGGPMSALALAPAFVA GMAIGRFDLTRMRTALSLVSSGAVMLIVSKLLGVFVLPWLSRSFEEWLVSVQGTAGAEPDQYAIWPHNVAPPLWHNLLSI APHSASTFQTMLGLGAAFLVLGMVCLVPQKISAVLKPFAGVGRVALTMYAAQFVVIWALEISGAKYDIGAIPFGDLFVAA VATVTGWLIARLPTGPLETAMRRFDRAFSNLGPVTGPARLR >Mature_440_residues SIRIKLPDGSVREFEEEASIEDVAASISCGLEHAVAGKLNGKLVDLSTPLQDGALVEIVTRDSAEGQKIVREKSRGKGRI VALDAARGLAVIGMYLQHFALNETNGSIVSGNTTLLFVLCGGISYSIMAGRMMDRGMEPAAFRTRMLARAVFIDMIGYLL IMLNTPFGVILPAYAALFVLALVLIRRSTRVLVTTAAVLLAVSPPLMILGGSVLSGANLLGDIAGGPMSALALAPAFVAG MAIGRFDLTRMRTALSLVSSGAVMLIVSKLLGVFVLPWLSRSFEEWLVSVQGTAGAEPDQYAIWPHNVAPPLWHNLLSIA PHSASTFQTMLGLGAAFLVLGMVCLVPQKISAVLKPFAGVGRVALTMYAAQFVVIWALEISGAKYDIGAIPFGDLFVAAV ATVTGWLIARLPTGPLETAMRRFDRAFSNLGPVTGPARLR
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
None
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 46732; Mature: 46601
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRIKLPDGSVREFEEEASIEDVAASISCGLEHAVAGKLNGKLVDLSTPLQDGALVEIV CEEEEECCCCCHHHHHHHCCHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCCCCEEEEE TRDSAEGQKIVREKSRGKGRIVALDAARGLAVIGMYLQHFALNETNGSIVSGNTTLLFVL ECCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEE CGGISYSIMAGRMMDRGMEPAAFRTRMLARAVFIDMIGYLLIMLNTPFGVILPAYAALFV ECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LALVLIRRSTRVLVTTAAVLLAVSPPLMILGGSVLSGANLLGDIAGGPMSALALAPAFVA HHHHHHHCCCHHHHHHHHHHHHCCCCHHEECCCHHCCHHHHHHCCCCCHHHHHHHHHHHH GMAIGRFDLTRMRTALSLVSSGAVMLIVSKLLGVFVLPWLSRSFEEWLVSVQGTAGAEPD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC QYAIWPHNVAPPLWHNLLSIAPHSASTFQTMLGLGAAFLVLGMVCLVPQKISAVLKPFAG CEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRVALTMYAAQFVVIWALEISGAKYDIGAIPFGDLFVAAVATVTGWLIARLPTGPLETA HHHHHHHHHHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH MRRFDRAFSNLGPVTGPARLR HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIRIKLPDGSVREFEEEASIEDVAASISCGLEHAVAGKLNGKLVDLSTPLQDGALVEIV EEEEECCCCCHHHHHHHCCHHHHHHHHHHCHHHHHHCCCCCEEEEECCCCCCCCEEEEE TRDSAEGQKIVREKSRGKGRIVALDAARGLAVIGMYLQHFALNETNGSIVSGNTTLLFVL ECCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEE CGGISYSIMAGRMMDRGMEPAAFRTRMLARAVFIDMIGYLLIMLNTPFGVILPAYAALFV ECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LALVLIRRSTRVLVTTAAVLLAVSPPLMILGGSVLSGANLLGDIAGGPMSALALAPAFVA HHHHHHHCCCHHHHHHHHHHHHCCCCHHEECCCHHCCHHHHHHCCCCCHHHHHHHHHHHH GMAIGRFDLTRMRTALSLVSSGAVMLIVSKLLGVFVLPWLSRSFEEWLVSVQGTAGAEPD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC QYAIWPHNVAPPLWHNLLSIAPHSASTFQTMLGLGAAFLVLGMVCLVPQKISAVLKPFAG CEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRVALTMYAAQFVVIWALEISGAKYDIGAIPFGDLFVAAVATVTGWLIARLPTGPLETA HHHHHHHHHHHHHHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH MRRFDRAFSNLGPVTGPARLR HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2115870; 8969504; 9387221; 9384377; 3027671; 1379177 [H]