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The map label for this gene is dppB [H]

Identifier: 52784693

GI number: 52784693

Start: 913150

End: 914151

Strand: Direct

Name: dppB [H]

Synonym: BLi00895

Alternate gene names: 52784693

Gene position: 913150-914151 (Clockwise)

Preceding gene: 52784692

Following gene: 52784694

Centisome position: 21.63

GC content: 50.4

Gene sequence:

>1002_bases
TTGCTTGCGTACTGTTTAAAACGGACGGCCATGCTGATCCCCGTTCTCATCGGCATGACATTGGTCGTTTTTTCGATCAT
CCGCTTTATTCCCGGCAACCCCGCCCAGGTTATTCTCGGCCAGAGGGCGACAAAGGAAGCGGTGCAGCAGCTGACCGTCC
AGCTCGGCCTTGATCAGCCGTGGTATATGCAATATGCCAGATATATAGGGGATTTGCTGAAAGGGGATCTCGGGACATCA
ATCCGCACGGGAGCGGCGATTACGCAAGAAATAAAGCCATATTTGTTCGCCACTCTCGAACTTGCCTTTTTCGCGATGCT
GATCGCAGTGTTTGTCGGCGTGAATGCCGGAATCATCAGCGCGTGGTTTAAGAACTCGGTATTCGACTATATCGCGATGC
TGGTGGCTTTAATCGGCGTGTCGATGCCGATTTTTTGGCTCGGTTTGATGGGCCAGTGGTTTTTTTCGATCGAGCTCGGC
TGGCTGCCGACAACAGGAAGGGAGAATGTCAGAAATCCGGTCGAAGCCATTACGTACATTCATACATTGGACACCCTTTT
GCACGGAAGATTTGATCAGTTTGCAGAAGCCATCCGCCATTTAATTCTGCCGGGAACGGCTCTTGCCACCATTCCCGCAG
CGATCATTGCGAGAATTACGAGAGCCAGCATGATAGAGGTGCTGCAGTCCGATTATATCCGCACGGCAAAAGCAAAAGGC
GTGCATATGTTTTTCGTCATCTATAAGCACGGTTTAAAAAATGCATTCATTCCGGTATTGACCGTCATCGGCCTGCAAAC
CGGACTGTTACTGGGCGGCGCAATTTTAACAGAGACTATTTTTGCCTGGCCCGGCATCGGCCGGTACATTTATGATGCGA
TCAGCTACCGCGACTACCCGGTTATCCAATCGGGCATCCTCGTGATCGCCTTCATCTTCGTCATGATTAACTTCATCGTT
GATCTGCTGTACGCCGTCATCGATCCGAGAATTAAATATTAG

Upstream 100 bases:

>100_bases
CCGATTTTGGCCGGTTCAAAAGATATCGACGGATATGTTCCGCACCCGACAGGGAGTGAAGTATTGTCCGGCGTAGAGTT
TAAATAGGTGGTGACAGCCA

Downstream 100 bases:

>100_bases
GAGGCGGGAAACATGGTTGTGCTTCAAAATGAACAGCAGAGGGAGGACGTGAAGGTGCGTTCGCCTTTGGCGGAACATAT
TCGGCGGTTTTTTGAGCATA

Product: hypothetical protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLAYCLKRTAMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRATKEAVQQLTVQLGLDQPWYMQYARYIGDLLKGDLGTS
IRTGAAITQEIKPYLFATLELAFFAMLIAVFVGVNAGIISAWFKNSVFDYIAMLVALIGVSMPIFWLGLMGQWFFSIELG
WLPTTGRENVRNPVEAITYIHTLDTLLHGRFDQFAEAIRHLILPGTALATIPAAIIARITRASMIEVLQSDYIRTAKAKG
VHMFFVIYKHGLKNAFIPVLTVIGLQTGLLLGGAILTETIFAWPGIGRYIYDAISYRDYPVIQSGILVIAFIFVMINFIV
DLLYAVIDPRIKY

Sequences:

>Translated_333_residues
MLAYCLKRTAMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRATKEAVQQLTVQLGLDQPWYMQYARYIGDLLKGDLGTS
IRTGAAITQEIKPYLFATLELAFFAMLIAVFVGVNAGIISAWFKNSVFDYIAMLVALIGVSMPIFWLGLMGQWFFSIELG
WLPTTGRENVRNPVEAITYIHTLDTLLHGRFDQFAEAIRHLILPGTALATIPAAIIARITRASMIEVLQSDYIRTAKAKG
VHMFFVIYKHGLKNAFIPVLTVIGLQTGLLLGGAILTETIFAWPGIGRYIYDAISYRDYPVIQSGILVIAFIFVMINFIV
DLLYAVIDPRIKY
>Mature_333_residues
MLAYCLKRTAMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRATKEAVQQLTVQLGLDQPWYMQYARYIGDLLKGDLGTS
IRTGAAITQEIKPYLFATLELAFFAMLIAVFVGVNAGIISAWFKNSVFDYIAMLVALIGVSMPIFWLGLMGQWFFSIELG
WLPTTGRENVRNPVEAITYIHTLDTLLHGRFDQFAEAIRHLILPGTALATIPAAIIARITRASMIEVLQSDYIRTAKAKG
VHMFFVIYKHGLKNAFIPVLTVIGLQTGLLLGGAILTETIFAWPGIGRYIYDAISYRDYPVIQSGILVIAFIFVMINFIV
DLLYAVIDPRIKY

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=340, Percent_Identity=45.2941176470588, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI1787053, Length=333, Percent_Identity=42.3423423423423, Blast_Score=268, Evalue=3e-73,
Organism=Escherichia coli, GI1787761, Length=326, Percent_Identity=43.8650306748466, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1789888, Length=335, Percent_Identity=35.5223880597015, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=35.0943396226415, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787497, Length=335, Percent_Identity=33.7313432835821, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1788504, Length=374, Percent_Identity=24.0641711229947, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37117; Mature: 37117

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYCLKRTAMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRATKEAVQQLTVQLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCH
WYMQYARYIGDLLKGDLGTSIRTGAAITQEIKPYLFATLELAFFAMLIAVFVGVNAGIIS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AWFKNSVFDYIAMLVALIGVSMPIFWLGLMGQWFFSIELGWLPTTGRENVRNPVEAITYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCHHHHHHHH
HTLDTLLHGRFDQFAEAIRHLILPGTALATIPAAIIARITRASMIEVLQSDYIRTAKAKG
HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VHMFFVIYKHGLKNAFIPVLTVIGLQTGLLLGGAILTETIFAWPGIGRYIYDAISYRDYP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCH
VIQSGILVIAFIFVMINFIVDLLYAVIDPRIKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLAYCLKRTAMLIPVLIGMTLVVFSIIRFIPGNPAQVILGQRATKEAVQQLTVQLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCH
WYMQYARYIGDLLKGDLGTSIRTGAAITQEIKPYLFATLELAFFAMLIAVFVGVNAGIIS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AWFKNSVFDYIAMLVALIGVSMPIFWLGLMGQWFFSIELGWLPTTGRENVRNPVEAITYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHCCHHHHHHHH
HTLDTLLHGRFDQFAEAIRHLILPGTALATIPAAIIARITRASMIEVLQSDYIRTAKAKG
HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VHMFFVIYKHGLKNAFIPVLTVIGLQTGLLLGGAILTETIFAWPGIGRYIYDAISYRDYP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCH
VIQSGILVIAFIFVMINFIVDLLYAVIDPRIKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]