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The map label for this gene is dppC [H]

Identifier: 52784694

GI number: 52784694

Start: 914164

End: 915054

Strand: Direct

Name: dppC [H]

Synonym: BLi00896

Alternate gene names: 52784694

Gene position: 914164-915054 (Clockwise)

Preceding gene: 52784693

Following gene: 52784697

Centisome position: 21.65

GC content: 53.31

Gene sequence:

>891_bases
ATGGTTGTGCTTCAAAATGAACAGCAGAGGGAGGACGTGAAGGTGCGTTCGCCTTTGGCGGAACATATTCGGCGGTTTTT
TGAGCATAAATTGGCTGCCGCCGGCACGATTCTAGTCGCGCTGTTTATCCTGCTAGCCATCTTCGCGCCGCTCATCGCAC
CATACGGAATAAACGACCAGTCACTGTCAGACAGGCTCGCCGCTCCGTCTGCGGAACACCTTTTTGGCACGGATGACTTT
GGCAGGGATATTTTCTCTAGGGTGCTTTACGGCGCAAGGCTGTCTTTATGGGTCGGCTTTTTCTCCTGTTTGGCATCGGC
CTTGGCGGGGACGCTGCTAGGGCTGATCGCCGGTTTTTACGGCAGATGGGCTGATGCATTGATTTCACGGCTGTTTGATA
TCATGCTCGCGTTTCCGAGCATTCTGCTGGCGATCGCCATTGTAGCGATTCTGGGGCCTTCTCTTGAAAATGCCCTGATT
GCCATCGCCATCATCAACGTTCCGACGTTTGGCAGGCTCGTTCGTTCAAAAGTGCTCAGCATCAGGCAGGAGGAGTATAT
CTTATCAGCGCGTGCTGTCGGGATGTCCAATATAAGGCTGATGTTTAAACACATTCTCCCCAACAGCATGGCCCCGGTTA
TCGTTCAAGCGACGCTGAATATTGGAACCGCGATTATAGAAGCGGCCGCGCTCGGATTTTTAGGGTTGGGGGCGCAGGCG
CCGAACCCCGAGTGGGGAAAAATGCTTGCGGATGCCAGGCCTTACTTGGCGCAGGCTCCATGGACATTGTTTTTTCCGGG
ATTTGCGATCATGCTGACCGTTCTCGGCTTTAATCTGATGGGAGACGGCCTGCGCGACACCCTTGATCCGAAAATGAAGG
AAGGAAAATAA

Upstream 100 bases:

>100_bases
CATCCTCGTGATCGCCTTCATCTTCGTCATGATTAACTTCATCGTTGATCTGCTGTACGCCGTCATCGATCCGAGAATTA
AATATTAGGAGGCGGGAAAC

Downstream 100 bases:

>100_bases
AAAACCGGTTAACATATTCGTTAACCGGTTTATTCTTCCTCAACTTCAAGCTCGCTGTCTTTTTTGTGGTACGTCTGAAA
GCTTGAGAGCAAGGTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MVVLQNEQQREDVKVRSPLAEHIRRFFEHKLAAAGTILVALFILLAIFAPLIAPYGINDQSLSDRLAAPSAEHLFGTDDF
GRDIFSRVLYGARLSLWVGFFSCLASALAGTLLGLIAGFYGRWADALISRLFDIMLAFPSILLAIAIVAILGPSLENALI
AIAIINVPTFGRLVRSKVLSIRQEEYILSARAVGMSNIRLMFKHILPNSMAPVIVQATLNIGTAIIEAAALGFLGLGAQA
PNPEWGKMLADARPYLAQAPWTLFFPGFAIMLTVLGFNLMGDGLRDTLDPKMKEGK

Sequences:

>Translated_296_residues
MVVLQNEQQREDVKVRSPLAEHIRRFFEHKLAAAGTILVALFILLAIFAPLIAPYGINDQSLSDRLAAPSAEHLFGTDDF
GRDIFSRVLYGARLSLWVGFFSCLASALAGTLLGLIAGFYGRWADALISRLFDIMLAFPSILLAIAIVAILGPSLENALI
AIAIINVPTFGRLVRSKVLSIRQEEYILSARAVGMSNIRLMFKHILPNSMAPVIVQATLNIGTAIIEAAALGFLGLGAQA
PNPEWGKMLADARPYLAQAPWTLFFPGFAIMLTVLGFNLMGDGLRDTLDPKMKEGK
>Mature_296_residues
MVVLQNEQQREDVKVRSPLAEHIRRFFEHKLAAAGTILVALFILLAIFAPLIAPYGINDQSLSDRLAAPSAEHLFGTDDF
GRDIFSRVLYGARLSLWVGFFSCLASALAGTLLGLIAGFYGRWADALISRLFDIMLAFPSILLAIAIVAILGPSLENALI
AIAIINVPTFGRLVRSKVLSIRQEEYILSARAVGMSNIRLMFKHILPNSMAPVIVQATLNIGTAIIEAAALGFLGLGAQA
PNPEWGKMLADARPYLAQAPWTLFFPGFAIMLTVLGFNLMGDGLRDTLDPKMKEGK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=281, Percent_Identity=51.2455516014235, Blast_Score=280, Evalue=6e-77,
Organism=Escherichia coli, GI1787760, Length=291, Percent_Identity=45.0171821305842, Blast_Score=250, Evalue=8e-68,
Organism=Escherichia coli, GI1789964, Length=284, Percent_Identity=49.2957746478873, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1787549, Length=268, Percent_Identity=40.2985074626866, Blast_Score=187, Evalue=8e-49,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=39.7489539748954, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1787498, Length=291, Percent_Identity=35.3951890034364, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=30.3964757709251, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32178; Mature: 32178

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVLQNEQQREDVKVRSPLAEHIRRFFEHKLAAAGTILVALFILLAIFAPLIAPYGINDQ
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SLSDRLAAPSAEHLFGTDDFGRDIFSRVLYGARLSLWVGFFSCLASALAGTLLGLIAGFY
HHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWADALISRLFDIMLAFPSILLAIAIVAILGPSLENALIAIAIINVPTFGRLVRSKVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHEEECCCHHHHHHHHHHHH
IRQEEYILSARAVGMSNIRLMFKHILPNSMAPVIVQATLNIGTAIIEAAALGFLGLGAQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNPEWGKMLADARPYLAQAPWTLFFPGFAIMLTVLGFNLMGDGLRDTLDPKMKEGK
CCCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MVVLQNEQQREDVKVRSPLAEHIRRFFEHKLAAAGTILVALFILLAIFAPLIAPYGINDQ
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SLSDRLAAPSAEHLFGTDDFGRDIFSRVLYGARLSLWVGFFSCLASALAGTLLGLIAGFY
HHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWADALISRLFDIMLAFPSILLAIAIVAILGPSLENALIAIAIINVPTFGRLVRSKVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHEEECCCHHHHHHHHHHHH
IRQEEYILSARAVGMSNIRLMFKHILPNSMAPVIVQATLNIGTAIIEAAALGFLGLGAQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PNPEWGKMLADARPYLAQAPWTLFFPGFAIMLTVLGFNLMGDGLRDTLDPKMKEGK
CCCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]