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The map label for this gene is yacL [H]

Identifier: 52783945

GI number: 52783945

Start: 107450

End: 108538

Strand: Direct

Name: yacL [H]

Synonym: BLi00107

Alternate gene names: 52783945

Gene position: 107450-108538 (Clockwise)

Preceding gene: 52783944

Following gene: 52783946

Centisome position: 2.54

GC content: 44.72

Gene sequence:

>1089_bases
ATGTTAAAACGAATAGTTCAAGCGTTCTTTGCGATTTTGGGAGGCGTTATCGGTATTTTTCTCATACCGGAATTGTTTGT
ACTGTTAAATGTACAGGACATACCTTTAGTAACAAACCCGTATGCGTCTGCTTGTTTAGGAGCTATCATCTTTTTTCTTC
TGGGCATCTGGTGTGCGGATCACGTCATCAACTGGGTGAAACAGATTGAGGATTCCTTGATCAAAGCACCTGTCTCAGAC
TTGTTGTTCGGCTCTTTGGGATTAATCTTCGGACTTATGCTCGCTTATCTTATCGTCAACGTCATTCCGTTAAAAGACAT
CCCTTATCAGTTAATCAGCACGGTCATTCCGATTGTGTTGGCCGCATTTCTCGGCTATCTCGGATTCCGTGTGGGTTTCA
AGAAAAAGGATGAAATGCTGACACTTTTTACATCGAGAAAGAAAAAAGGTTCTGCTGAGGAAGAGCGTCCGGAAGAAGAC
AAAAAGCTGAAAATTTTAGACACAAGTGTTATTATAGATGGGAGAATTGCTGATATTTGTCAGACCGGATTTCTTGAAGG
CGTCATTGTGATTCCTCAGTTTGTGCTTGAGGAACTGCAGCATATCGCCGACTCTTCAGACGTCCTCAAACGAAACAGAG
GGCGGAGAGGACTGGATATTTTAAACCGTATCCAGAAAGAGCTTGATATTAAAGTTGAAATTTATGAAGGCGATTTTGAA
GACATCCAAGAGGTCGACAGCAAGCTCGTCAAACTGGCGAAGCTGACCTCGGGCGTTGTCGTCACAAACGATTTCAATTT
GAACAAAGTATGCGAGCTCCAAAAGGTTGCCGTATTGAACATCAACGACCTTGCCAACGCCGTCAAGCCTGTCGTGCTTC
CGGGAGAAGAAATGAAGGTGCAGGTCATCAAAGACGGAAAAGAACATAATCAGGGCGTGGCTTATCTGGACGACGGCACG
ATGATTGTCGTTGAAGAAGGGCGAAATTATATTGGCAAACATATCGACGTGCTCGTGACCAGCGTGCTGCAGACAGCGGC
AGGCAGAATGATATTCGCCAAGCCGAAACTGCTGGAAAAGGCGCTTTGA

Upstream 100 bases:

>100_bases
ATTTATGGGTATATTATTCTTACTTTTTGTTTTCCCTTTTTCACGTGGAAACAGCTGCATTTATAAAAATTAAAACGATT
ATTTTAAAGGAGGTGAAGGT

Downstream 100 bases:

>100_bases
AAAAGGGAGAAATAAAATGAATTATGAAGTCGTCATTCCTGCCGCCGGACAAGGTAAACGAATGAATGCCGGGAAAAACA
AACTGTTTATCGAGGCGAAA

Product: YacL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLKRIVQAFFAILGGVIGIFLIPELFVLLNVQDIPLVTNPYASACLGAIIFFLLGIWCADHVINWVKQIEDSLIKAPVSD
LLFGSLGLIFGLMLAYLIVNVIPLKDIPYQLISTVIPIVLAAFLGYLGFRVGFKKKDEMLTLFTSRKKKGSAEEERPEED
KKLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELDIKVEIYEGDFE
DIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMKVQVIKDGKEHNQGVAYLDDGT
MIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL

Sequences:

>Translated_362_residues
MLKRIVQAFFAILGGVIGIFLIPELFVLLNVQDIPLVTNPYASACLGAIIFFLLGIWCADHVINWVKQIEDSLIKAPVSD
LLFGSLGLIFGLMLAYLIVNVIPLKDIPYQLISTVIPIVLAAFLGYLGFRVGFKKKDEMLTLFTSRKKKGSAEEERPEED
KKLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELDIKVEIYEGDFE
DIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMKVQVIKDGKEHNQGVAYLDDGT
MIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL
>Mature_362_residues
MLKRIVQAFFAILGGVIGIFLIPELFVLLNVQDIPLVTNPYASACLGAIIFFLLGIWCADHVINWVKQIEDSLIKAPVSD
LLFGSLGLIFGLMLAYLIVNVIPLKDIPYQLISTVIPIVLAAFLGYLGFRVGFKKKDEMLTLFTSRKKKGSAEEERPEED
KKLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELDIKVEIYEGDFE
DIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMKVQVIKDGKEHNQGVAYLDDGT
MIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 40210; Mature: 40210

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRIVQAFFAILGGVIGIFLIPELFVLLNVQDIPLVTNPYASACLGAIIFFLLGIWCAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HVINWVKQIEDSLIKAPVSDLLFGSLGLIFGLMLAYLIVNVIPLKDIPYQLISTVIPIVL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AAFLGYLGFRVGFKKKDEMLTLFTSRKKKGSAEEERPEEDKKLKILDTSVIIDGRIADIC
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHH
QTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELDIKVEIYEGDFE
HHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCEEEEEECCCHH
DIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMKV
HHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHEECHHHHHHHHCCEEECCCCCEE
QVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEK
EEECCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHH
AL
CC
>Mature Secondary Structure
MLKRIVQAFFAILGGVIGIFLIPELFVLLNVQDIPLVTNPYASACLGAIIFFLLGIWCAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HVINWVKQIEDSLIKAPVSDLLFGSLGLIFGLMLAYLIVNVIPLKDIPYQLISTVIPIVL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AAFLGYLGFRVGFKKKDEMLTLFTSRKKKGSAEEERPEEDKKLKILDTSVIIDGRIADIC
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHH
QTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELDIKVEIYEGDFE
HHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCEEEEEECCCHH
DIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMKV
HHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHEECHHHHHHHHCCEEECCCCCEE
QVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEK
EEECCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHH
AL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]