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The map label for this gene is yazA [C]

Identifier: 52783892

GI number: 52783892

Start: 47925

End: 48218

Strand: Direct

Name: yazA [C]

Synonym: BLi00048

Alternate gene names: 52783892

Gene position: 47925-48218 (Clockwise)

Preceding gene: 52783891

Following gene: 52783893

Centisome position: 1.13

GC content: 44.22

Gene sequence:

>294_bases
ATGGAGACGAATAGCCATTACTTTTACGTGCTTTCGTGCCGGGACGGCAGCTTGTACGCAGGCTATACAAACAATATCGA
AAAGCGCCTGAAAACGCATAATGACGGGAAGGGCGCCAAGTATACGAGGGCAAGGCTGCCGGTTAAACTCCATTATGCAG
AGTGCTTTTCAACGAAACGAGAAGCGATGCAGGCCGAGTACTATTTCAAAAAATTATCGAGAAAAAACAAAGAACGTTAT
ATAGAAGAAAAAAGACGGGAGGGTGTTGATTATCAACCGGCAAAAGAGTTTTGA

Upstream 100 bases:

>100_bases
GAAGGAATAAAAGACGGCCGACCTGACCTGAAAATTTTGCCTCCTTTGTTTGTGTATGATGAACAAGATCAATATACACA
TGAAATAAGGAAGATTTTAT

Downstream 100 bases:

>100_bases
CCAAAAATCAGACATGGGTATGTTATATCTCGTACCGACTCCCATCGGCAATTTAGAGGATATGACATTTCGGGCGGTTT
CTGTGTTAAAAGAGGCGGAC

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
METNSHYFYVLSCRDGSLYAGYTNNIEKRLKTHNDGKGAKYTRARLPVKLHYAECFSTKREAMQAEYYFKKLSRKNKERY
IEEKRREGVDYQPAKEF

Sequences:

>Translated_97_residues
METNSHYFYVLSCRDGSLYAGYTNNIEKRLKTHNDGKGAKYTRARLPVKLHYAECFSTKREAMQAEYYFKKLSRKNKERY
IEEKRREGVDYQPAKEF
>Mature_97_residues
METNSHYFYVLSCRDGSLYAGYTNNIEKRLKTHNDGKGAKYTRARLPVKLHYAECFSTKREAMQAEYYFKKLSRKNKERY
IEEKRREGVDYQPAKEF

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y536_BACLD (Q65PI6)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_077321.1
- RefSeq:   YP_089721.1
- HSSP:   Q9KGL3
- ProteinModelPortal:   Q65PI6
- SMR:   Q65PI6
- STRING:   Q65PI6
- EnsemblBacteria:   EBBACT00000058036
- EnsemblBacteria:   EBBACT00000059991
- GeneID:   3028035
- GeneID:   3099012
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi00048
- KEGG:   bli:BL00536
- NMPDR:   fig|279010.5.peg.1330
- eggNOG:   COG2827
- GeneTree:   EBGT00050000002560
- HOGENOM:   HBG678874
- OMA:   EKEATHE
- ProtClustDB:   PRK00329
- BioCyc:   BLIC279010-1:BLI00048-MONOMER
- BioCyc:   BLIC279010:BL00536-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305
- SMART:   SM00465

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11646; Mature: 11646

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNSHYFYVLSCRDGSLYAGYTNNIEKRLKTHNDGKGAKYTRARLPVKLHYAECFSTKR
CCCCCCEEEEEEECCCCEEECCCCCHHHHHHCCCCCCCCCEEECCCCEEEHHHHHHHHHH
EAMQAEYYFKKLSRKNKERYIEEKRREGVDYQPAKEF
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
METNSHYFYVLSCRDGSLYAGYTNNIEKRLKTHNDGKGAKYTRARLPVKLHYAECFSTKR
CCCCCCEEEEEEECCCCEEECCCCCHHHHHHCCCCCCCCCEEECCCCEEEHHHHHHHHHH
EAMQAEYYFKKLSRKNKERYIEEKRREGVDYQPAKEF
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA