Click here to switch to the map view.

The map label for this gene is hslR [C]

Identifier: 51894364

GI number: 51894364

Start: 3442711

End: 3443004

Strand: Reverse

Name: hslR [C]

Synonym: STH3229

Alternate gene names: 51894364

Gene position: 3443004-3442711 (Counterclockwise)

Preceding gene: 51894365

Following gene: 51894363

Centisome position: 96.55

GC content: 67.69

Gene sequence:

>294_bases
ATGCGCATCGACAAGTTCCTGAAGGTCTCGCGTATCATCAAGCGGCGCACCCTGGCGAAGGAGGTCTGCGACGCCGGGCG
GGTGCAGGTGGGCGGCAAGGTGGCGAAGGCCGGCACCGAGGTGAAGCCCGGCGACACGATCTCCATCGACTTCGGCCGTC
GTCAGCTGACGGTGCGGGTTCTGGCCGTGCGCGAGCACGTGCGCGCCGCCGAGGCGCGGGAGCTCTACGAGGTGATCGCG
GAGGAGTTCAAGGCCGACCCTCTGCTGGCGGAGCTGGAGGATGATCCCGAATAG

Upstream 100 bases:

>100_bases
TGCCTTCCGTCCGGGCAAGGAGCTGAAGGAGAGCGTATAAGTCAAGACGGTAAGGGCCGGACCCTGAAGGGGGTCCGGTC
TTCGTGCAAGGAGCGGTTGC

Downstream 100 bases:

>100_bases
CGAATGCACGGACCGCGGACCGGCGGTCCGTTTTCTTACATAACGCCCCGGGTGGCGGCATAGGGATGGGACAGGGTCCC
CCAGATCCAAGGGGCGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MRIDKFLKVSRIIKRRTLAKEVCDAGRVQVGGKVAKAGTEVKPGDTISIDFGRRQLTVRVLAVREHVRAAEARELYEVIA
EEFKADPLLAELEDDPE

Sequences:

>Translated_97_residues
MRIDKFLKVSRIIKRRTLAKEVCDAGRVQVGGKVAKAGTEVKPGDTISIDFGRRQLTVRVLAVREHVRAAEARELYEVIA
EEFKADPLLAELEDDPE
>Mature_97_residues
MRIDKFLKVSRIIKRRTLAKEVCDAGRVQVGGKVAKAGTEVKPGDTISIDFGRRQLTVRVLAVREHVRAAEARELYEVIA
EEFKADPLLAELEDDPE

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 10889; Mature: 10889

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDKFLKVSRIIKRRTLAKEVCDAGRVQVGGKVAKAGTEVKPGDTISIDFGRRQLTVRV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCCHHHHHHH
LAVREHVRAAEARELYEVIAEEFKADPLLAELEDDPE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MRIDKFLKVSRIIKRRTLAKEVCDAGRVQVGGKVAKAGTEVKPGDTISIDFGRRQLTVRV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCCHHHHHHH
LAVREHVRAAEARELYEVIAEEFKADPLLAELEDDPE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]