Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
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Accession | NC_006177 |
Length | 3,566,135 |
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The map label for this gene is 51894362
Identifier: 51894362
GI number: 51894362
Start: 3441733
End: 3442260
Strand: Reverse
Name: 51894362
Synonym: STH3227
Alternate gene names: NA
Gene position: 3442260-3441733 (Counterclockwise)
Preceding gene: 51894363
Following gene: 51894361
Centisome position: 96.53
GC content: 71.21
Gene sequence:
>528_bases GTGCTGCGGATGGAGCTGCAGTTCTACGCGCTGTTTATGACGGTGCTCAGCGGCATCGGGGTCGGCCTGCTGTTCGACCT GCTCCGGGCGGTCAGGCGGTTCCTGCGCCCAGGGCCGCTGCTGGCGGCCCTGGGGGATCTTCTTTTCTGGGGCGCCGCGA CGGCCATGGTGGGCACCGGGCTGTTCCTGGGCAACTGGGGGGAGTACCGGTTCTACGTGCTGGTCGGGCTCCTGACCGGC CTGGTTCTGCACTTCGCGCTGGCGAGCCCGGCTGTGCTCTGGCTGGCGGACCGGTTGCTGCACGCGGTGGCCTGGGTGCT AAAGGTGCTCTGGGAGCTGGCGATGCGGCTGGTCTGGTTTCCCCTGCAGGCGGTGGCGGCGGTCCTGTGGCGGCTGGGCC GCGGGCTGGGCACGTGGCTGGGGCGTCGGCTGCGGGGACCTTACCGGTGGCTCCGGCTGCGATACCTGTTGGCCAGACGC CGCCTGCGGCGCGCGTGGCGCCACTGGTTCCGCGGGCCGAAGACGTGA
Upstream 100 bases:
>100_bases GAGGCAGCGGACCGGCCGGCAGCAGCGGGGCCGGTCGTTCCTGGAGCGGCTGCTCCGGTAGCGGGCGCGCAGAGCGAGTC GGGGGCGGGGAGGCGGTCCG
Downstream 100 bases:
>100_bases AGTTTCTGGACGGGCAGAAGGAGTTTCACGGCTGCAGAAGAACGTAATAAGAACATACACAGCTTGTACTCAGGTTGTAC TCAGGATGTACACAGCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLRMELQFYALFMTVLSGIGVGLLFDLLRAVRRFLRPGPLLAALGDLLFWGAATAMVGTGLFLGNWGEYRFYVLVGLLTG LVLHFALASPAVLWLADRLLHAVAWVLKVLWELAMRLVWFPLQAVAAVLWRLGRGLGTWLGRRLRGPYRWLRLRYLLARR RLRRAWRHWFRGPKT
Sequences:
>Translated_175_residues MLRMELQFYALFMTVLSGIGVGLLFDLLRAVRRFLRPGPLLAALGDLLFWGAATAMVGTGLFLGNWGEYRFYVLVGLLTG LVLHFALASPAVLWLADRLLHAVAWVLKVLWELAMRLVWFPLQAVAAVLWRLGRGLGTWLGRRLRGPYRWLRLRYLLARR RLRRAWRHWFRGPKT >Mature_175_residues MLRMELQFYALFMTVLSGIGVGLLFDLLRAVRRFLRPGPLLAALGDLLFWGAATAMVGTGLFLGNWGEYRFYVLVGLLTG LVLHFALASPAVLWLADRLLHAVAWVLKVLWELAMRLVWFPLQAVAAVLWRLGRGLGTWLGRRLRGPYRWLRLRYLLARR RLRRAWRHWFRGPKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20255; Mature: 20255
Theoretical pI: Translated: 12.47; Mature: 12.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRMELQFYALFMTVLSGIGVGLLFDLLRAVRRFLRPGPLLAALGDLLFWGAATAMVGTG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LFLGNWGEYRFYVLVGLLTGLVLHFALASPAVLWLADRLLHAVAWVLKVLWELAMRLVWF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLQAVAAVLWRLGRGLGTWLGRRLRGPYRWLRLRYLLARRRLRRAWRHWFRGPKT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRMELQFYALFMTVLSGIGVGLLFDLLRAVRRFLRPGPLLAALGDLLFWGAATAMVGTG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LFLGNWGEYRFYVLVGLLTGLVLHFALASPAVLWLADRLLHAVAWVLKVLWELAMRLVWF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLQAVAAVLWRLGRGLGTWLGRRLRGPYRWLRLRYLLARRRLRRAWRHWFRGPKT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA