Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894361

Identifier: 51894361

GI number: 51894361

Start: 3441002

End: 3441361

Strand: Reverse

Name: 51894361

Synonym: STH3226

Alternate gene names: NA

Gene position: 3441361-3441002 (Counterclockwise)

Preceding gene: 51894362

Following gene: 51894360

Centisome position: 96.5

GC content: 68.89

Gene sequence:

>360_bases
ATGAGAACTCCCTATAGGAGGGCAGACACCGCGGCCACCGCGCCCGAGCCAGGCCGGCGCGCCAGGGGAGATCCCCTGCG
GCGGCACTGGCTGACCGGCGCGCTGATTGCCGCGGTCGGCGCCGTCCTCTCGTTTGCGGCGCTGGAGCTCTACGAGGCGA
GGATGCAGCTGGAGCACGCCCTGCAGGCGCAGGCGCAGGTGGAGTCGGAGCTGCGGGCGCTCCAGGAGAAAAACCGGCGG
CTGTCCGAGACGTTGGAGCGGGTCACCAGCGACGAGTCGATGGAGCTGAAGGCGAAGCAACTGGGCTTCACGTGGCCCGA
TGAGCAGGTCTATCAGACAATCGTGCCGCGCGGGCACTGA

Upstream 100 bases:

>100_bases
CCCTGTACAACCGGGCCAAGTCCAAGGGCTACCAGGTCGTGATCGTCCTGCCGGGCGACAGTCTGGGGCTGTTTGACAGC
GCCGACAGGGAGGATGAAGA

Downstream 100 bases:

>100_bases
GCGCGGGAAGGGCGCCCTGCCGGCACACTGGCAGGCCCTGGTCGGTTGAAATCCGCCGCCGGCGCGTGCTAAGATGAACT
AACGCGATCGGGCCCGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHALQAQAQVESELRALQEKNRR
LSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH

Sequences:

>Translated_119_residues
MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHALQAQAQVESELRALQEKNRR
LSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH
>Mature_119_residues
MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHALQAQAQVESELRALQEKNRR
LSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13482; Mature: 13482

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAQAQVESELRALQEKNRRLSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAQAQVESELRALQEKNRRLSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA