Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
---|---|
Accession | NC_006177 |
Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51894361
Identifier: 51894361
GI number: 51894361
Start: 3441002
End: 3441361
Strand: Reverse
Name: 51894361
Synonym: STH3226
Alternate gene names: NA
Gene position: 3441361-3441002 (Counterclockwise)
Preceding gene: 51894362
Following gene: 51894360
Centisome position: 96.5
GC content: 68.89
Gene sequence:
>360_bases ATGAGAACTCCCTATAGGAGGGCAGACACCGCGGCCACCGCGCCCGAGCCAGGCCGGCGCGCCAGGGGAGATCCCCTGCG GCGGCACTGGCTGACCGGCGCGCTGATTGCCGCGGTCGGCGCCGTCCTCTCGTTTGCGGCGCTGGAGCTCTACGAGGCGA GGATGCAGCTGGAGCACGCCCTGCAGGCGCAGGCGCAGGTGGAGTCGGAGCTGCGGGCGCTCCAGGAGAAAAACCGGCGG CTGTCCGAGACGTTGGAGCGGGTCACCAGCGACGAGTCGATGGAGCTGAAGGCGAAGCAACTGGGCTTCACGTGGCCCGA TGAGCAGGTCTATCAGACAATCGTGCCGCGCGGGCACTGA
Upstream 100 bases:
>100_bases CCCTGTACAACCGGGCCAAGTCCAAGGGCTACCAGGTCGTGATCGTCCTGCCGGGCGACAGTCTGGGGCTGTTTGACAGC GCCGACAGGGAGGATGAAGA
Downstream 100 bases:
>100_bases GCGCGGGAAGGGCGCCCTGCCGGCACACTGGCAGGCCCTGGTCGGTTGAAATCCGCCGCCGGCGCGTGCTAAGATGAACT AACGCGATCGGGCCCGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHALQAQAQVESELRALQEKNRR LSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH
Sequences:
>Translated_119_residues MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHALQAQAQVESELRALQEKNRR LSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH >Mature_119_residues MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHALQAQAQVESELRALQEKNRR LSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13482; Mature: 13482
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAQAQVESELRALQEKNRRLSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MRTPYRRADTAATAPEPGRRARGDPLRRHWLTGALIAAVGAVLSFAALELYEARMQLEHA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAQAQVESELRALQEKNRRLSETLERVTSDESMELKAKQLGFTWPDEQVYQTIVPRGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA