Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
---|---|
Accession | NC_006177 |
Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51894360
Identifier: 51894360
GI number: 51894360
Start: 3440447
End: 3440779
Strand: Reverse
Name: 51894360
Synonym: STH3225
Alternate gene names: NA
Gene position: 3440779-3440447 (Counterclockwise)
Preceding gene: 51894361
Following gene: 51894358
Centisome position: 96.48
GC content: 61.86
Gene sequence:
>333_bases GTGTTCTCGGGTTTCTGTGGCCTTGTTTCCACCTGTCGCCGAGACGCGGCAGGTCTTTCCGTATGGCCGCTCCGGCCCTC CGGCGAGATGCGTTCCGCCTCGAAACCTCTGAGCCTGGTCAGGTCACGCTTCAGTTGGAGGCGGAATGTGCGGTGGGCTG AGGCTGTGGGGTGCACATTCCGCCTCGAATCGGACGCCTGGATCACGATGTTCGAGTTCACAGGCGGTCGAGTAAAAAGT AGAAGGCCGTCCCGGACGGGGACGGTCCTCTCTTCTAGCACCTGTTTCTCCGCCACCGGCGCAGCGTCTCCACGCCATCG CGAATCAGATTGA
Upstream 100 bases:
>100_bases CTTAAAATCTTGGGGCCGCAGAGGCCGTGCGGGTTCGAGTCCCGCCTCGGGCACCAGATGAGACAAGGGCTGCAGGGTTC TGGACCCTGCAGCCCTTGAT
Downstream 100 bases:
>100_bases CCTCGCTCCGGGTCAGTTCCAGTTCACTCTGAAGGATGACCTCGTCCCCCAGCGCGAAGGCGTCGTCCAAGCCGCCGGCC CGGCGCAGCAGCCGGTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTFRLESDAWITMFEFTGGRVKS RRPSRTGTVLSSSTCFSATGAASPRHRESD
Sequences:
>Translated_110_residues MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTFRLESDAWITMFEFTGGRVKS RRPSRTGTVLSSSTCFSATGAASPRHRESD >Mature_110_residues MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTFRLESDAWITMFEFTGGRVKS RRPSRTGTVLSSSTCFSATGAASPRHRESD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12211; Mature: 12211
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTF CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCEEE RLESDAWITMFEFTGGRVKSRRPSRTGTVLSSSTCFSATGAASPRHRESD EECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTF CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCEEE RLESDAWITMFEFTGGRVKSRRPSRTGTVLSSSTCFSATGAASPRHRESD EECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA