Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894360

Identifier: 51894360

GI number: 51894360

Start: 3440447

End: 3440779

Strand: Reverse

Name: 51894360

Synonym: STH3225

Alternate gene names: NA

Gene position: 3440779-3440447 (Counterclockwise)

Preceding gene: 51894361

Following gene: 51894358

Centisome position: 96.48

GC content: 61.86

Gene sequence:

>333_bases
GTGTTCTCGGGTTTCTGTGGCCTTGTTTCCACCTGTCGCCGAGACGCGGCAGGTCTTTCCGTATGGCCGCTCCGGCCCTC
CGGCGAGATGCGTTCCGCCTCGAAACCTCTGAGCCTGGTCAGGTCACGCTTCAGTTGGAGGCGGAATGTGCGGTGGGCTG
AGGCTGTGGGGTGCACATTCCGCCTCGAATCGGACGCCTGGATCACGATGTTCGAGTTCACAGGCGGTCGAGTAAAAAGT
AGAAGGCCGTCCCGGACGGGGACGGTCCTCTCTTCTAGCACCTGTTTCTCCGCCACCGGCGCAGCGTCTCCACGCCATCG
CGAATCAGATTGA

Upstream 100 bases:

>100_bases
CTTAAAATCTTGGGGCCGCAGAGGCCGTGCGGGTTCGAGTCCCGCCTCGGGCACCAGATGAGACAAGGGCTGCAGGGTTC
TGGACCCTGCAGCCCTTGAT

Downstream 100 bases:

>100_bases
CCTCGCTCCGGGTCAGTTCCAGTTCACTCTGAAGGATGACCTCGTCCCCCAGCGCGAAGGCGTCGTCCAAGCCGCCGGCC
CGGCGCAGCAGCCGGTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTFRLESDAWITMFEFTGGRVKS
RRPSRTGTVLSSSTCFSATGAASPRHRESD

Sequences:

>Translated_110_residues
MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTFRLESDAWITMFEFTGGRVKS
RRPSRTGTVLSSSTCFSATGAASPRHRESD
>Mature_110_residues
MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTFRLESDAWITMFEFTGGRVKS
RRPSRTGTVLSSSTCFSATGAASPRHRESD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12211; Mature: 12211

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTF
CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCEEE
RLESDAWITMFEFTGGRVKSRRPSRTGTVLSSSTCFSATGAASPRHRESD
EECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSGFCGLVSTCRRDAAGLSVWPLRPSGEMRSASKPLSLVRSRFSWRRNVRWAEAVGCTF
CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCEEE
RLESDAWITMFEFTGGRVKSRRPSRTGTVLSSSTCFSATGAASPRHRESD
EECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA