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The map label for this gene is 51893942

Identifier: 51893942

GI number: 51893942

Start: 3016141

End: 3017004

Strand: Reverse

Name: 51893942

Synonym: STH2804

Alternate gene names: NA

Gene position: 3017004-3016141 (Counterclockwise)

Preceding gene: 51893943

Following gene: 51893941

Centisome position: 84.6

GC content: 67.59

Gene sequence:

>864_bases
ATGGTGAAGGCGTTGCCCGGCTGGATCGGCCTCGTGACTGTGCTGCTCCTCATCGGGCTTTCCATCTGGCTGTTTGCCCT
GGGTCTGCCTGACGCCCCGTGGCTCAGGCCGTCGCCTGTCCTCCTGGCGGCCTCGGCCGTGCTGTTCCTGGTCGCCTGCA
TCTGCTGCAACGGGCTCTTCGTCGTGCAGCCGAACCAGGCGCGTGTGCTGGTTCTGTTCGGCCGCTACACCGGCACCGTG
AAGGCCGACGGGTGGTATTTCGTCAATCCACTGGTCTCCAAGCGGCCGGTCAGCCTGCGGGTGCGCAACTTCACCTCGCC
GCAGCTGAAGGTGAACGACGCCAACGGCAACCCCATCGAGATCGCGGCGGTGGTGGTGTGGCGGGTGGTGGACACCGCCC
GGGCGGTGTTCAGCGTGGAGGACTACAACGCCTTTGTGGAGGTCCAGTCCGAGACCGCCATCCGCCACCTGGCCAGCCAG
TACCCCTACGATGACGGCCTGAACGAGGGCGAACTGTCCCTCCGGGGATCGGCGGAGGAGGTTGCGCTGGCCCTGAAGAA
AGAACTGCAGGACCGGCTGGAGATGGCCGGCATCGCGGTCATCGAGGCCCGCATCTCGCACCTGGCGTACAGCCCCGAAA
TCGCCGGCGCCATGCTGCAGCGGCAGCAGGCCGCGGCCATCATCGCGGCCCGGCAGAAGATTGTCGAGGGCGCGGTCTCC
ATGGTGGAGATGGCCCTCGACATGCTGGACCAGCACCGGAAGGTGGAGCTCACGCCGGAGCGGAAGGCTGAGCTGGTGGC
AAACCTGCTGGTCGTCCTCACCAGCGACCGCGCCGCCACGCCGACCCTGCCGCTGGCGCGCTAG

Upstream 100 bases:

>100_bases
TCAATGGCTGTGGCAGCCTGAAGGAGCCGAATGAGAAGAAGAGGAGGGATCCGGGTTGCAGACGCGTGAGCAGGAACCCG
TGGTCGCGGTCCCGGAACGT

Downstream 100 bases:

>100_bases
CGGGGCGCGCCGCCCGGCTCTCACCGGGCCACACTAGGCACGAGGTGAGCCTGCTGTGAGCGAGCGCGCGGCGATCGCGA
CGTCGTGCTATGATCATCTG

Product: somatin-like protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Family Protein; Somatin-Like Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Transmembrane Protein; Membrane Protease Subunit Stomatin/Prohibitin; HFLK Protein

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MVKALPGWIGLVTVLLLIGLSIWLFALGLPDAPWLRPSPVLLAASAVLFLVACICCNGLFVVQPNQARVLVLFGRYTGTV
KADGWYFVNPLVSKRPVSLRVRNFTSPQLKVNDANGNPIEIAAVVVWRVVDTARAVFSVEDYNAFVEVQSETAIRHLASQ
YPYDDGLNEGELSLRGSAEEVALALKKELQDRLEMAGIAVIEARISHLAYSPEIAGAMLQRQQAAAIIAARQKIVEGAVS
MVEMALDMLDQHRKVELTPERKAELVANLLVVLTSDRAATPTLPLAR

Sequences:

>Translated_287_residues
MVKALPGWIGLVTVLLLIGLSIWLFALGLPDAPWLRPSPVLLAASAVLFLVACICCNGLFVVQPNQARVLVLFGRYTGTV
KADGWYFVNPLVSKRPVSLRVRNFTSPQLKVNDANGNPIEIAAVVVWRVVDTARAVFSVEDYNAFVEVQSETAIRHLASQ
YPYDDGLNEGELSLRGSAEEVALALKKELQDRLEMAGIAVIEARISHLAYSPEIAGAMLQRQQAAAIIAARQKIVEGAVS
MVEMALDMLDQHRKVELTPERKAELVANLLVVLTSDRAATPTLPLAR
>Mature_287_residues
MVKALPGWIGLVTVLLLIGLSIWLFALGLPDAPWLRPSPVLLAASAVLFLVACICCNGLFVVQPNQARVLVLFGRYTGTV
KADGWYFVNPLVSKRPVSLRVRNFTSPQLKVNDANGNPIEIAAVVVWRVVDTARAVFSVEDYNAFVEVQSETAIRHLASQ
YPYDDGLNEGELSLRGSAEEVALALKKELQDRLEMAGIAVIEARISHLAYSPEIAGAMLQRQQAAAIIAARQKIVEGAVS
MVEMALDMLDQHRKVELTPERKAELVANLLVVLTSDRAATPTLPLAR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31289; Mature: 31289

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKALPGWIGLVTVLLLIGLSIWLFALGLPDAPWLRPSPVLLAASAVLFLVACICCNGLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEE
VVQPNQARVLVLFGRYTGTVKADGWYFVNPLVSKRPVSLRVRNFTSPQLKVNDANGNPIE
EECCCCCEEEEEEECCCCEEEECCEEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCEE
IAAVVVWRVVDTARAVFSVEDYNAFVEVQSETAIRHLASQYPYDDGLNEGELSLRGSAEE
HHHHHHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHH
VALALKKELQDRLEMAGIAVIEARISHLAYSPEIAGAMLQRQQAAAIIAARQKIVEGAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVEMALDMLDQHRKVELTPERKAELVANLLVVLTSDRAATPTLPLAR
HHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure
MVKALPGWIGLVTVLLLIGLSIWLFALGLPDAPWLRPSPVLLAASAVLFLVACICCNGLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEE
VVQPNQARVLVLFGRYTGTVKADGWYFVNPLVSKRPVSLRVRNFTSPQLKVNDANGNPIE
EECCCCCEEEEEEECCCCEEEECCEEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCEE
IAAVVVWRVVDTARAVFSVEDYNAFVEVQSETAIRHLASQYPYDDGLNEGELSLRGSAEE
HHHHHHHHHHHHHHHHEEEECCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHH
VALALKKELQDRLEMAGIAVIEARISHLAYSPEIAGAMLQRQQAAAIIAARQKIVEGAVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVEMALDMLDQHRKVELTPERKAELVANLLVVLTSDRAATPTLPLAR
HHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA