| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893941
Identifier: 51893941
GI number: 51893941
Start: 3015729
End: 3016085
Strand: Reverse
Name: 51893941
Synonym: STH2803
Alternate gene names: NA
Gene position: 3016085-3015729 (Counterclockwise)
Preceding gene: 51893942
Following gene: 51893940
Centisome position: 84.58
GC content: 73.95
Gene sequence:
>357_bases GTGAGCGAGCGCGCGGCGATCGCGACGTCGTGCTATGATCATCTGGGCGGGCCGCTGGGCGAGCGCCTCGCCCGTCGGCT CATGGAACTGGGGTGGGTGACGGCGGAGCCGGCCCCCGGCGTGACCCCGGAGGGGTGGGGGGGCTTCGCCCGGCTCGGCC TGGACCTCTCTCCCCTGCCGGCAGGACGGCGCAAGCCCGTGGCCCTGTGCGGGAAGCACATCGGCGCCCATCTGGGTTTC CTGCTGCGCCGGCATCTGCTGGAGGCGGGCTGGATCGAGCGGACGCCGGACGGGTTCGCCCTGACCCCGGCGGGTGAGGA GGCTCTCCGCCAACTCGGCGTCGACCTGGAGGACTGA
Upstream 100 bases:
>100_bases ACCAGCGACCGCGCCGCCACGCCGACCCTGCCGCTGGCGCGCTAGCGGGGCGCGCCGCCCGGCTCTCACCGGGCCACACT AGGCACGAGGTGAGCCTGCT
Downstream 100 bases:
>100_bases CGGTATGAACCGCATGCTGCACGAGACCCTGGCCATCGTCGGTTGGAGTTTCCTGGGCGCGACGGCGATCGGCGTCGTCG GTGCGCTCCTCTTCCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLPAGRRKPVALCGKHIGAHLGF LLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED
Sequences:
>Translated_118_residues MSERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLPAGRRKPVALCGKHIGAHLGF LLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED >Mature_117_residues SERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLPAGRRKPVALCGKHIGAHLGFL LRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12660; Mature: 12529
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLP CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC AGRRKPVALCGKHIGAHLGFLLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCCC >Mature Secondary Structure SERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLP CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC AGRRKPVALCGKHIGAHLGFLLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA