Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893941

Identifier: 51893941

GI number: 51893941

Start: 3015729

End: 3016085

Strand: Reverse

Name: 51893941

Synonym: STH2803

Alternate gene names: NA

Gene position: 3016085-3015729 (Counterclockwise)

Preceding gene: 51893942

Following gene: 51893940

Centisome position: 84.58

GC content: 73.95

Gene sequence:

>357_bases
GTGAGCGAGCGCGCGGCGATCGCGACGTCGTGCTATGATCATCTGGGCGGGCCGCTGGGCGAGCGCCTCGCCCGTCGGCT
CATGGAACTGGGGTGGGTGACGGCGGAGCCGGCCCCCGGCGTGACCCCGGAGGGGTGGGGGGGCTTCGCCCGGCTCGGCC
TGGACCTCTCTCCCCTGCCGGCAGGACGGCGCAAGCCCGTGGCCCTGTGCGGGAAGCACATCGGCGCCCATCTGGGTTTC
CTGCTGCGCCGGCATCTGCTGGAGGCGGGCTGGATCGAGCGGACGCCGGACGGGTTCGCCCTGACCCCGGCGGGTGAGGA
GGCTCTCCGCCAACTCGGCGTCGACCTGGAGGACTGA

Upstream 100 bases:

>100_bases
ACCAGCGACCGCGCCGCCACGCCGACCCTGCCGCTGGCGCGCTAGCGGGGCGCGCCGCCCGGCTCTCACCGGGCCACACT
AGGCACGAGGTGAGCCTGCT

Downstream 100 bases:

>100_bases
CGGTATGAACCGCATGCTGCACGAGACCCTGGCCATCGTCGGTTGGAGTTTCCTGGGCGCGACGGCGATCGGCGTCGTCG
GTGCGCTCCTCTTCCGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLPAGRRKPVALCGKHIGAHLGF
LLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED

Sequences:

>Translated_118_residues
MSERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLPAGRRKPVALCGKHIGAHLGF
LLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED
>Mature_117_residues
SERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLPAGRRKPVALCGKHIGAHLGFL
LRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12660; Mature: 12529

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLP
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
AGRRKPVALCGKHIGAHLGFLLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
SERAAIATSCYDHLGGPLGERLARRLMELGWVTAEPAPGVTPEGWGGFARLGLDLSPLP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC
AGRRKPVALCGKHIGAHLGFLLRRHLLEAGWIERTPDGFALTPAGEEALRQLGVDLED
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA