Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893921

Identifier: 51893921

GI number: 51893921

Start: 3001293

End: 3001742

Strand: Reverse

Name: 51893921

Synonym: STH2783

Alternate gene names: NA

Gene position: 3001742-3001293 (Counterclockwise)

Preceding gene: 51893922

Following gene: 51893920

Centisome position: 84.17

GC content: 68.0

Gene sequence:

>450_bases
ATGGAACGGGTAAGGCTGATCACCGGCCTGACCCGCATCGCGACCACAGGCCACGGAGAGCGGGCCACGCCCGCAACCCG
GGTGCCGTTTCGCGAACAGCTGGCGCGGTCGCACGCCATGCAGTTCAACGAGCGGATTGACCGCGCGCTGCAGGAGATCG
ACGAGCTGGGGCGCCGGCTGACGGAGTCGCTCAGCCAGCACGACCTGCAACTTTACCGGGAGGCCATCGGCCGGCTCTTC
CGCGACCTGACCCACCACATGATGGAAGTCCGGCAGAACCTGGAGTGGGATTCCTACGCCTGGGAGCAGCGGACGATGGT
CACCATCCAGCGGGTGGACCAGCGGCTGGAGGAGCTCGCCCGCATGGTGCTGGAGCAGGAGCAGGACCGGCTGGCGATCC
TCGCCGCGGTGGACGAGATCCGCGGGCTGCTCCTGGACGTCCGGATGTGA

Upstream 100 bases:

>100_bases
AACGGCATCGTGCGCTGGGTACAGCCGGGGATGCCCGCCACCGAGACGATTCTGGCAGCCGTGGACGCGCTCGGGGAGCA
GGCGTGAAAGGGGGATGCCG

Downstream 100 bases:

>100_bases
GACCCTGGGCCCTTCCCCGAGCGGGAGGGGCCCTGGTTTTTTGTCCCCAACTGTATGCATATCGTAGTACAGTTGCTGGA
TCCGCCGGCAGGGCCGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRLTESLSQHDLQLYREAIGRLF
RDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELARMVLEQEQDRLAILAAVDEIRGLLLDVRM

Sequences:

>Translated_149_residues
MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRLTESLSQHDLQLYREAIGRLF
RDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELARMVLEQEQDRLAILAAVDEIRGLLLDVRM
>Mature_149_residues
MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRLTESLSQHDLQLYREAIGRLF
RDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELARMVLEQEQDRLAILAAVDEIRGLLLDVRM

Specific function: Unknown

COG id: COG1728

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17649; Mature: 17649

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESLSQHDLQLYREAIGRLFRDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RMVLEQEQDRLAILAAVDEIRGLLLDVRM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERVRLITGLTRIATTGHGERATPATRVPFREQLARSHAMQFNERIDRALQEIDELGRRL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESLSQHDLQLYREAIGRLFRDLTHHMMEVRQNLEWDSYAWEQRTMVTIQRVDQRLEELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RMVLEQEQDRLAILAAVDEIRGLLLDVRM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA