Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
---|---|
Accession | NC_006177 |
Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is nuoN2
Identifier: 51893905
GI number: 51893905
Start: 2986066
End: 2987592
Strand: Reverse
Name: nuoN2
Synonym: STH2767
Alternate gene names: 51893905
Gene position: 2987592-2986066 (Counterclockwise)
Preceding gene: 51893906
Following gene: 51893903
Centisome position: 83.78
GC content: 66.93
Gene sequence:
>1527_bases TTGCCGGGAGTCGTCAGTTGGAGCCAACTGGTCAACCCCAGTTACGTGGCCATTCTGCCGCACCTGATCGTCACGGCAAC CCTCCTGGTCGTCATCGTCCTGGATGCCTACTTCAAGGAGAAGCGGAGCCTGGTCTGGGTGACGCTGGGCGGCGTGGTTC TGGCGATGCTGTCCATTTGGTACACCGCCAGCGACCCGCAGATCCAGGCGGGCATTGCCGCAGGACGGCCGCCGGAGTTC TGGGGCGGCATGATCATCGCCGACGGGTTCACCTTCTTCATGAACGGCGTGCTGCTCGGCATCGCCGCCCTGGTGATCCT GCTGTCGGCGGACTACGTGGGCAAGTTCCTGCGCGGGGCGCACATGGAGTTCTATGAGATCATCCTGGCGGTGACGCTGG GCATGATGTTCATGGTGTCCTCCCGCGATCTGCTCACCATCTACATCGGCCTGGAGCTCACGTCCATCTCCTCGTACGTG CTGGCGGGCATCCTGCGCAAGGATGCCAAGTCCAACGAGGCCGCCCTGAAGTACTTCCTCACCGGCGCCACCGCCTCGGC CGTCCTGCTCTTCGGCCTGTCGCTGATCTACGGCGTGACCGGTAGCACGCGGCTGCCCGAGGTCGCGGCGGCCCTCGCCG GAGGCAGCCACGTGGTGGCCGCGGCCGGCCCGGCTCTGACGCCCCTTCTGGTGGCAGGGATGGCCTTCCTGATGGTGGGC TTCGGCTTCAAGGTGGCGGCGGTGCCGGTGCACCAGTGGGCCCCGGACGTCTACGAGGGCGCGCCCACGCCGGTTACGGC GTTCTTCTCCGCCGGCCCCAAGGGGGCAGCCATGGCGGCCATCCTCCGGGTCTTCGTCGGCGGGCTGGGCGTGGCGCCGT TCACCGACAAGTGGGCCCTCATCTGGGCCCTGGCCGCGGCGGCCTCGATGACCGTGGGCAACCTGGTGGCCCTGCAGCAG ACCAACATCAAGCGCATGATGGCGTACTCCTCCATCGCTCAGGCCGGGTACATCCTGGTGGGCGTGGCGGCCTCGGGGCT GCAGTCCGTCGAGGGGATCTCGTCGGTGCTCTTCTACGTGATGGCCTACGCCGTGACCAACCTCGGCATCTTCGCCGTCC TCACCCACATGGACCAGGAGGGCGGCTGGGTGGAGGTGGACAACTACGCGGGGCTGGCCAAGCGGAACCCGCTGTACGCC TGGGCGCTGCTGCTGTTCTTCGTCTCCCTGATCGGCATCCCGCCGACGGTGGGCTTCCTGGGCAAGTTCTTCCTGTTCCG GGCGGCCGCCGCATCCGGATATCTCTGGCTGGCGGTGCTCATGGCGGTCAACTCCGTCATCTCCGTGGGCTACTACTACC GGGTGGTCAAGGTCATGTTCCTGGACCAGTCCGACTACCCGGCGCTCACGCCCAGCACGGGCATCTCCGCCACCGTTCTG CTGTCCCTGCTGGGGGTTGTGGCGCTGACCATCTTCGCCAACCCGTTCGTGCAGTGGACGGCGCAGTCCGCGGCGCTGCT GCATTAG
Upstream 100 bases:
>100_bases CTGATCGTGTTCTTCGGCGTATATCCCCGGCCGGTCATGGCTCTTTTGCAGAGCTCTGTTGAAGTGCTGACGCAGGTGAT GGGGCTGGGAGGGATGTAGG
Downstream 100 bases:
>100_bases ACCGAAAGCGCAGAAGAAGGGCCGGGAGCGGCAGGCTCCCGGCCCTGATCATTTATGGAAACTGCACGTAGCGTGTGCCT CAGTCCGCCGAGGAGCCCAT
Product: NADH dehydrogenase I subunit N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N 2; NDH-1 subunit N 2
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MPGVVSWSQLVNPSYVAILPHLIVTATLLVVIVLDAYFKEKRSLVWVTLGGVVLAMLSIWYTASDPQIQAGIAAGRPPEF WGGMIIADGFTFFMNGVLLGIAALVILLSADYVGKFLRGAHMEFYEIILAVTLGMMFMVSSRDLLTIYIGLELTSISSYV LAGILRKDAKSNEAALKYFLTGATASAVLLFGLSLIYGVTGSTRLPEVAAALAGGSHVVAAAGPALTPLLVAGMAFLMVG FGFKVAAVPVHQWAPDVYEGAPTPVTAFFSAGPKGAAMAAILRVFVGGLGVAPFTDKWALIWALAAAASMTVGNLVALQQ TNIKRMMAYSSIAQAGYILVGVAASGLQSVEGISSVLFYVMAYAVTNLGIFAVLTHMDQEGGWVEVDNYAGLAKRNPLYA WALLLFFVSLIGIPPTVGFLGKFFLFRAAAASGYLWLAVLMAVNSVISVGYYYRVVKVMFLDQSDYPALTPSTGISATVL LSLLGVVALTIFANPFVQWTAQSAALLH
Sequences:
>Translated_508_residues MPGVVSWSQLVNPSYVAILPHLIVTATLLVVIVLDAYFKEKRSLVWVTLGGVVLAMLSIWYTASDPQIQAGIAAGRPPEF WGGMIIADGFTFFMNGVLLGIAALVILLSADYVGKFLRGAHMEFYEIILAVTLGMMFMVSSRDLLTIYIGLELTSISSYV LAGILRKDAKSNEAALKYFLTGATASAVLLFGLSLIYGVTGSTRLPEVAAALAGGSHVVAAAGPALTPLLVAGMAFLMVG FGFKVAAVPVHQWAPDVYEGAPTPVTAFFSAGPKGAAMAAILRVFVGGLGVAPFTDKWALIWALAAAASMTVGNLVALQQ TNIKRMMAYSSIAQAGYILVGVAASGLQSVEGISSVLFYVMAYAVTNLGIFAVLTHMDQEGGWVEVDNYAGLAKRNPLYA WALLLFFVSLIGIPPTVGFLGKFFLFRAAAASGYLWLAVLMAVNSVISVGYYYRVVKVMFLDQSDYPALTPSTGISATVL LSLLGVVALTIFANPFVQWTAQSAALLH >Mature_507_residues PGVVSWSQLVNPSYVAILPHLIVTATLLVVIVLDAYFKEKRSLVWVTLGGVVLAMLSIWYTASDPQIQAGIAAGRPPEFW GGMIIADGFTFFMNGVLLGIAALVILLSADYVGKFLRGAHMEFYEIILAVTLGMMFMVSSRDLLTIYIGLELTSISSYVL AGILRKDAKSNEAALKYFLTGATASAVLLFGLSLIYGVTGSTRLPEVAAALAGGSHVVAAAGPALTPLLVAGMAFLMVGF GFKVAAVPVHQWAPDVYEGAPTPVTAFFSAGPKGAAMAAILRVFVGGLGVAPFTDKWALIWALAAAASMTVGNLVALQQT NIKRMMAYSSIAQAGYILVGVAASGLQSVEGISSVLFYVMAYAVTNLGIFAVLTHMDQEGGWVEVDNYAGLAKRNPLYAW ALLLFFVSLIGIPPTVGFLGKFFLFRAAAASGYLWLAVLMAVNSVISVGYYYRVVKVMFLDQSDYPALTPSTGISATVLL SLLGVVALTIFANPFVQWTAQSAALLH
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family
Homologues:
Organism=Homo sapiens, GI251831117, Length=377, Percent_Identity=24.1379310344828, Blast_Score=73, Evalue=7e-13, Organism=Escherichia coli, GI145693160, Length=499, Percent_Identity=32.6653306613226, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1788831, Length=403, Percent_Identity=27.0471464019851, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI1788614, Length=398, Percent_Identity=25.6281407035176, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1788827, Length=459, Percent_Identity=26.797385620915, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1788829, Length=338, Percent_Identity=24.8520710059172, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUON2_SYMTH (Q67KP6)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076596.1 - GeneID: 2979578 - GenomeReviews: AP006840_GR - KEGG: sth:STH2767 - NMPDR: fig|292459.1.peg.2644 - HOGENOM: HBG747830 - OMA: ILMTITI - BioCyc: STHE292459:STH2767-MONOMER - GO: GO:0006810 - HAMAP: MF_00445 - InterPro: IPR010096 - InterPro: IPR001750 - TIGRFAMs: TIGR01770
Pfam domain/function: PF00361 Oxidored_q1
EC number: =1.6.99.5
Molecular weight: Translated: 53747; Mature: 53616
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xfa50658)-; HASH(0x156704bc)-; HASH(0x14ba2cb4)-; HASH(0x1490d708)-; HASH(0x1567048c)-; HASH(0x156789c4)-; HASH(0x154851cc)-; HASH(0xfa91e04)-; HASH(0x15485268)-; HASH(0x156704f8)-; HASH(0x13c5a0ec)-; HASH(0x156706a8)-; HASH(0x15091dcc)-; HASH(0x150895d0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVVSWSQLVNPSYVAILPHLIVTATLLVVIVLDAYFKEKRSLVWVTLGGVVLAMLSIW CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH YTASDPQIQAGIAAGRPPEFWGGMIIADGFTFFMNGVLLGIAALVILLSADYVGKFLRGA HCCCCCCEEECCCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HMEFYEIILAVTLGMMFMVSSRDLLTIYIGLELTSISSYVLAGILRKDAKSNEAALKYFL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHH TGATASAVLLFGLSLIYGVTGSTRLPEVAAALAGGSHVVAAAGPALTPLLVAGMAFLMVG HCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH FGFKVAAVPVHQWAPDVYEGAPTPVTAFFSAGPKGAAMAAILRVFVGGLGVAPFTDKWAL CCCEEEEEEHHHCCCHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH IWALAAAASMTVGNLVALQQTNIKRMMAYSSIAQAGYILVGVAASGLQSVEGISSVLFYV HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHH MAYAVTNLGIFAVLTHMDQEGGWVEVDNYAGLAKRNPLYAWALLLFFVSLIGIPPTVGFL HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH GKFFLFRAAAASGYLWLAVLMAVNSVISVGYYYRVVKVMFLDQSDYPALTPSTGISATVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHH LSLLGVVALTIFANPFVQWTAQSAALLH HHHHHHHHHHHHHCHHHHHHCCHHHCCH >Mature Secondary Structure PGVVSWSQLVNPSYVAILPHLIVTATLLVVIVLDAYFKEKRSLVWVTLGGVVLAMLSIW CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH YTASDPQIQAGIAAGRPPEFWGGMIIADGFTFFMNGVLLGIAALVILLSADYVGKFLRGA HCCCCCCEEECCCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HMEFYEIILAVTLGMMFMVSSRDLLTIYIGLELTSISSYVLAGILRKDAKSNEAALKYFL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHH TGATASAVLLFGLSLIYGVTGSTRLPEVAAALAGGSHVVAAAGPALTPLLVAGMAFLMVG HCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH FGFKVAAVPVHQWAPDVYEGAPTPVTAFFSAGPKGAAMAAILRVFVGGLGVAPFTDKWAL CCCEEEEEEHHHCCCHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH IWALAAAASMTVGNLVALQQTNIKRMMAYSSIAQAGYILVGVAASGLQSVEGISSVLFYV HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHH MAYAVTNLGIFAVLTHMDQEGGWVEVDNYAGLAKRNPLYAWALLLFFVSLIGIPPTVGFL HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH GKFFLFRAAAASGYLWLAVLMAVNSVISVGYYYRVVKVMFLDQSDYPALTPSTGISATVL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHH LSLLGVVALTIFANPFVQWTAQSAALLH HHHHHHHHHHHHHCHHHHHHCCHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA