Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893847

Identifier: 51893847

GI number: 51893847

Start: 2905997

End: 2907205

Strand: Reverse

Name: 51893847

Synonym: STH2709

Alternate gene names: NA

Gene position: 2907205-2905997 (Counterclockwise)

Preceding gene: 51893848

Following gene: 51893846

Centisome position: 81.52

GC content: 52.52

Gene sequence:

>1209_bases
ATGGCGGTTGGCAAAGTTCTCCTCGTTTCTTCACGCAATTTATATACTGCCAACGGGGAGTGGCGGTTGGTTTCTAGTCG
AGCCTCGACGTTGAGTAAAGCGTTCGGGATAGAAACCGATGCCTTAGCGCTGATCAGGAGCCATCATGTCAAGAATGGTC
CAAGAGCACCGCAACTACCTGGGTTTAATTGTGAATATGTGTATTGTAACAGTTGGGGCAACCTTCCGGAATCCATGCGG
CGGTTATTGGGGGAAGTGAAGCGAAGATTAAGAACAACCCAGTATCGGGGTGTGATATTGTCTGGGGATCTAGTATATCC
GCTACTACCGTGGCTACCGGTCGAAAGAACGTTGATTGACCTTCACGGCGTCCCGGAAGAATGGGTGGAGTACCCAAATC
CACGTTTGGGTCCTGCTTGGTTTAGAAAGGCTTTGTTTCATGCAGCCATACGCCTCCATCAGTGGGCGGTTCCTCGTACA
GCTGGGGTTCTAACCGTTACCAACGAACTCGCGGAGTTGTCAGTCGAACGGTACGGGGCACGGTCTACTTATGTGGTCCC
ATGTGTAGGGTCGCACTTGGTGGTAGAAGACCCACCTGTGATCCGACAGAGGTGGCGCCAGCGTCTAGGCATCGGGAACA
GTGAACTTGCGTTTGTCTACAGTGGTGGACTTTCTCCGTGGCAACTATTTGATGAAACAATCGCGTGTTATCGGGTGTGG
CGTCAACACCTGGGCAGTGCTTGCCGGCTGGTATTGTTTACTCCGGATCCCGAGAGATCGTTAGCGCGCGTTGTCGATTC
GGGTGTCCCGAGCGACGAGGTTGTGAGTATGTCGCTGCTTCCGGAAGAAGTCGTTCCAGCTCTTCACGCTTGCGATGTGG
GCTTTGTTCTGCGGGAGGACAACTGGACAAACCGGGTGGCATTTCCGAACAAGTTCGCTGAGTACTGTGCTGCAGGGCTC
CTTATTGTGACAAGTCCCGGGCTGCGAGCTGCGGCGGATGTGGTGGTAACGAAGGGTATTGGCGTTCTGGTAGATCCACG
AGAAATCGAACCTGCAGCGCTTTCGCAATACCCCGAATTAAGAGAGAAGATTTCCACTCGTGCTTCCAACTGGTCTGGTT
ATTACGACGCGTGTCGATCTCTGGTAAACGAACGTTATTCTATGGAAAAGGCTCTACGACCGGTAGTGGATTTCTTTTTG
GATGGCTGA

Upstream 100 bases:

>100_bases
GTTTGATCGTTGGGTGGCGAACTCGTGTTCAACAAATTCAACATGTCCCTAGGGCGGGCGTGACATGGGACCTATCGTCG
TGCAATTGGAGGCGAACCAT

Downstream 100 bases:

>100_bases
TGGTTGTTAAACGTGCTTTTGTATTGTGACTCTAGCTGTGCCCAGTTGCCCTGGTTGGTTGGTATTTCACCAGCATTATG
TTGTGTCGGTAATGAAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAVGKVLLVSSRNLYTANGEWRLVSSRASTLSKAFGIETDALALIRSHHVKNGPRAPQLPGFNCEYVYCNSWGNLPESMR
RLLGEVKRRLRTTQYRGVILSGDLVYPLLPWLPVERTLIDLHGVPEEWVEYPNPRLGPAWFRKALFHAAIRLHQWAVPRT
AGVLTVTNELAELSVERYGARSTYVVPCVGSHLVVEDPPVIRQRWRQRLGIGNSELAFVYSGGLSPWQLFDETIACYRVW
RQHLGSACRLVLFTPDPERSLARVVDSGVPSDEVVSMSLLPEEVVPALHACDVGFVLREDNWTNRVAFPNKFAEYCAAGL
LIVTSPGLRAAADVVVTKGIGVLVDPREIEPAALSQYPELREKISTRASNWSGYYDACRSLVNERYSMEKALRPVVDFFL
DG

Sequences:

>Translated_402_residues
MAVGKVLLVSSRNLYTANGEWRLVSSRASTLSKAFGIETDALALIRSHHVKNGPRAPQLPGFNCEYVYCNSWGNLPESMR
RLLGEVKRRLRTTQYRGVILSGDLVYPLLPWLPVERTLIDLHGVPEEWVEYPNPRLGPAWFRKALFHAAIRLHQWAVPRT
AGVLTVTNELAELSVERYGARSTYVVPCVGSHLVVEDPPVIRQRWRQRLGIGNSELAFVYSGGLSPWQLFDETIACYRVW
RQHLGSACRLVLFTPDPERSLARVVDSGVPSDEVVSMSLLPEEVVPALHACDVGFVLREDNWTNRVAFPNKFAEYCAAGL
LIVTSPGLRAAADVVVTKGIGVLVDPREIEPAALSQYPELREKISTRASNWSGYYDACRSLVNERYSMEKALRPVVDFFL
DG
>Mature_401_residues
AVGKVLLVSSRNLYTANGEWRLVSSRASTLSKAFGIETDALALIRSHHVKNGPRAPQLPGFNCEYVYCNSWGNLPESMRR
LLGEVKRRLRTTQYRGVILSGDLVYPLLPWLPVERTLIDLHGVPEEWVEYPNPRLGPAWFRKALFHAAIRLHQWAVPRTA
GVLTVTNELAELSVERYGARSTYVVPCVGSHLVVEDPPVIRQRWRQRLGIGNSELAFVYSGGLSPWQLFDETIACYRVWR
QHLGSACRLVLFTPDPERSLARVVDSGVPSDEVVSMSLLPEEVVPALHACDVGFVLREDNWTNRVAFPNKFAEYCAAGLL
IVTSPGLRAAADVVVTKGIGVLVDPREIEPAALSQYPELREKISTRASNWSGYYDACRSLVNERYSMEKALRPVVDFFLD
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45028; Mature: 44897

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGKVLLVSSRNLYTANGEWRLVSSRASTLSKAFGIETDALALIRSHHVKNGPRAPQLP
CCCCCEEEEECCCEEECCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
GFNCEYVYCNSWGNLPESMRRLLGEVKRRLRTTQYRGVILSGDLVYPLLPWLPVERTLID
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCHHHHHH
LHGVPEEWVEYPNPRLGPAWFRKALFHAAIRLHQWAVPRTAGVLTVTNELAELSVERYGA
HCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCC
RSTYVVPCVGSHLVVEDPPVIRQRWRQRLGIGNSELAFVYSGGLSPWQLFDETIACYRVW
CCCEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
RQHLGSACRLVLFTPDPERSLARVVDSGVPSDEVVSMSLLPEEVVPALHACDVGFVLRED
HHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHHHCCCEEEEECC
NWTNRVAFPNKFAEYCAAGLLIVTSPGLRAAADVVVTKGIGVLVDPREIEPAALSQYPEL
CCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHEECCCEEEECCCCCCHHHHHCCHHH
REKISTRASNWSGYYDACRSLVNERYSMEKALRPVVDFFLDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVGKVLLVSSRNLYTANGEWRLVSSRASTLSKAFGIETDALALIRSHHVKNGPRAPQLP
CCCCEEEEECCCEEECCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
GFNCEYVYCNSWGNLPESMRRLLGEVKRRLRTTQYRGVILSGDLVYPLLPWLPVERTLID
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCHHHHHH
LHGVPEEWVEYPNPRLGPAWFRKALFHAAIRLHQWAVPRTAGVLTVTNELAELSVERYGA
HCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCC
RSTYVVPCVGSHLVVEDPPVIRQRWRQRLGIGNSELAFVYSGGLSPWQLFDETIACYRVW
CCCEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
RQHLGSACRLVLFTPDPERSLARVVDSGVPSDEVVSMSLLPEEVVPALHACDVGFVLRED
HHHCCCCEEEEEECCCCHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHHHCCCEEEEECC
NWTNRVAFPNKFAEYCAAGLLIVTSPGLRAAADVVVTKGIGVLVDPREIEPAALSQYPEL
CCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHEECCCEEEECCCCCCHHHHHCCHHH
REKISTRASNWSGYYDACRSLVNERYSMEKALRPVVDFFLDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA