| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is murC [H]
Identifier: 51599068
GI number: 51599068
Start: 865527
End: 866933
Strand: Direct
Name: murC [H]
Synonym: BG0842
Alternate gene names: 51599068
Gene position: 865527-866933 (Clockwise)
Preceding gene: 51599067
Following gene: 51599069
Centisome position: 95.72
GC content: 25.73
Gene sequence:
>1407_bases ATGAAGGTTGATTTTGACAGTTTGAATAATATTTTTTTTGTAGGAATAAAGGGAAGCGGAGTTTGTTCTCTGGCTTGTTT TTTAAATTCAAAAGGATATTTTGTAGAAGGAGTAGATGTTCCTGATAAATTTTATACTGATGATATTTTAAATAATAATG AAATATCTTATTATGAAAATATTTATGAGTTTTCATTAAAAGAGCTTGATAGATCTTTTGATTTAATAGTATATTCTTCA GCTTATGATAAGGACGGTTTGCAAGTTTTGCTTGAAGCAAAAGAATTGAATATACCTATTTTATCTTATTCTGAGGTTCT TGGTGAGCTTTCTAGAAAGCACTATAGTATTGGAATTGCAGGTTCTCACGGTAAAACTACCACTACGGCATTTTTAGGTA TTCTTTTTGATAAATTAGGATTAAATCCTAATGTTATTGTGGGATCAAGTGTTAAAGATTTTGGAGATAATTCTGCAATA GCCGGCATTAGCGATATTTTTATTGTTGAGACTTGTGAGTATAAAAAACATTTTTTATATTTTAGTCCTAATATGCTCAT TTTAACCAATGTTGACTATGAGCATGTTGATTTTTTTAAAAATTATGAGGCCCTTGAAGATGCTTTTTTACAATATATTA ATAATTTGAAGAAAAATGGAATATTAATAATTAATTCTGATGATAAGAATTTGCTTAAAATTAAAAGTCAAATCAATAGA GAAGATATAAATATTTTTAGCTTTGGATCTAGAGATTTGTCCAATTTTCAAATAAGTAACATTGTAGTTAAGAATGAATA TTTTTGTTTTTCTTTTTTAGGCTTATACAATATTGAACTTAGGACTGTCTTATTTCATAATATATTAAATTTTTCAGCAG CGCTTTTAGCTTTAAATCTTTTTTTAGAAAGTAATGGAAAATCAATTTTTGATTTTGAAGAAGTAGTAAAGAGAGTTGCA AAAAATTATAGTGGTATAAAAAGAAGGTCTGAACTTATTAAAGAGAAAAAGGGAGTAATTTACATGGATGATTATGCTCA TCATCCTAGGGAGATTAGAGCTACTCTTTTTGGTATTAAAAATTTCTATAAGAACAAACGTATAATTTTGGATTTCATGC CCCATACTTTCACAAGAACAAAAGAATTTTTTGATGATTTTGTTGAAGTTCTTAATATTGCTGATGTATTAATTTTGCAC AATATATATCTTTCTAACAGGGAGAATTTTAATCCAGATGAACTTTCTTTTAAATTGTTTTTAAATATTAAAAAAATAAA TAAAAATACTTATTTTTTTAAAGATGTTAAAGATTCTATTAACTTTATAAAGAGTTTACTAATATCTGGAGATTTGTTTA TTACAATGGGTGCTGGCAATAATTTTATTTTACACGATTTTTTGTAA
Upstream 100 bases:
>100_bases ATTATTACTAACGTGCTTAAGTATACAATAATTAATATATCATCTATTGATATAGTTATACATAAATTTTATGACAAAAA AGATTATTTAGAAGAGAGTT
Downstream 100 bases:
>100_bases GGGTATTATAGTGAAAAGCATGACGGGATTTTTTCATTTGGAAAAGATAATTGGCAACTATATGTTTAGTGTTAATTTAA AGTCTTATAATGGAAAATTT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKVDFDSLNNIFFVGIKGSGVCSLACFLNSKGYFVEGVDVPDKFYTDDILNNNEISYYENIYEFSLKELDRSFDLIVYSS AYDKDGLQVLLEAKELNIPILSYSEVLGELSRKHYSIGIAGSHGKTTTTAFLGILFDKLGLNPNVIVGSSVKDFGDNSAI AGISDIFIVETCEYKKHFLYFSPNMLILTNVDYEHVDFFKNYEALEDAFLQYINNLKKNGILIINSDDKNLLKIKSQINR EDINIFSFGSRDLSNFQISNIVVKNEYFCFSFLGLYNIELRTVLFHNILNFSAALLALNLFLESNGKSIFDFEEVVKRVA KNYSGIKRRSELIKEKKGVIYMDDYAHHPREIRATLFGIKNFYKNKRIILDFMPHTFTRTKEFFDDFVEVLNIADVLILH NIYLSNRENFNPDELSFKLFLNIKKINKNTYFFKDVKDSINFIKSLLISGDLFITMGAGNNFILHDFL
Sequences:
>Translated_468_residues MKVDFDSLNNIFFVGIKGSGVCSLACFLNSKGYFVEGVDVPDKFYTDDILNNNEISYYENIYEFSLKELDRSFDLIVYSS AYDKDGLQVLLEAKELNIPILSYSEVLGELSRKHYSIGIAGSHGKTTTTAFLGILFDKLGLNPNVIVGSSVKDFGDNSAI AGISDIFIVETCEYKKHFLYFSPNMLILTNVDYEHVDFFKNYEALEDAFLQYINNLKKNGILIINSDDKNLLKIKSQINR EDINIFSFGSRDLSNFQISNIVVKNEYFCFSFLGLYNIELRTVLFHNILNFSAALLALNLFLESNGKSIFDFEEVVKRVA KNYSGIKRRSELIKEKKGVIYMDDYAHHPREIRATLFGIKNFYKNKRIILDFMPHTFTRTKEFFDDFVEVLNIADVLILH NIYLSNRENFNPDELSFKLFLNIKKINKNTYFFKDVKDSINFIKSLLISGDLFITMGAGNNFILHDFL >Mature_468_residues MKVDFDSLNNIFFVGIKGSGVCSLACFLNSKGYFVEGVDVPDKFYTDDILNNNEISYYENIYEFSLKELDRSFDLIVYSS AYDKDGLQVLLEAKELNIPILSYSEVLGELSRKHYSIGIAGSHGKTTTTAFLGILFDKLGLNPNVIVGSSVKDFGDNSAI AGISDIFIVETCEYKKHFLYFSPNMLILTNVDYEHVDFFKNYEALEDAFLQYINNLKKNGILIINSDDKNLLKIKSQINR EDINIFSFGSRDLSNFQISNIVVKNEYFCFSFLGLYNIELRTVLFHNILNFSAALLALNLFLESNGKSIFDFEEVVKRVA KNYSGIKRRSELIKEKKGVIYMDDYAHHPREIRATLFGIKNFYKNKRIILDFMPHTFTRTKEFFDDFVEVLNIADVLILH NIYLSNRENFNPDELSFKLFLNIKKINKNTYFFKDVKDSINFIKSLLISGDLFITMGAGNNFILHDFL
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=444, Percent_Identity=27.4774774774775, Blast_Score=159, Evalue=5e-40, Organism=Escherichia coli, GI1790680, Length=475, Percent_Identity=23.5789473684211, Blast_Score=115, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 53886; Mature: 53886
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVDFDSLNNIFFVGIKGSGVCSLACFLNSKGYFVEGVDVPDKFYTDDILNNNEISYYEN CCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCCCCHHHHH IYEFSLKELDRSFDLIVYSSAYDKDGLQVLLEAKELNIPILSYSEVLGELSRKHYSIGIA HHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEHHHCCCCEEEHHHHHHHHHHCEEEEEEE GSHGKTTTTAFLGILFDKLGLNPNVIVGSSVKDFGDNSAIAGISDIFIVETCEYKKHFLY CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCCEEEEEEEECCCCEEEE FSPNMLILTNVDYEHVDFFKNYEALEDAFLQYINNLKKNGILIINSDDKNLLKIKSQINR ECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCC EDINIFSFGSRDLSNFQISNIVVKNEYFCFSFLGLYNIELRTVLFHNILNFSAALLALNL CCCEEEEECCCCCCCEEEEEEEEECCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHH FLESNGKSIFDFEEVVKRVAKNYSGIKRRSELIKEKKGVIYMDDYAHHPREIRATLFGIK HEECCCCEEECHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHH NFYKNKRIILDFMPHTFTRTKEFFDDFVEVLNIADVLILHNIYLSNRENFNPDELSFKLF HHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEE LNIKKINKNTYFFKDVKDSINFIKSLLISGDLFITMGAGNNFILHDFL EEEEEECCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCC >Mature Secondary Structure MKVDFDSLNNIFFVGIKGSGVCSLACFLNSKGYFVEGVDVPDKFYTDDILNNNEISYYEN CCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCCCCHHHHH IYEFSLKELDRSFDLIVYSSAYDKDGLQVLLEAKELNIPILSYSEVLGELSRKHYSIGIA HHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEHHHCCCCEEEHHHHHHHHHHCEEEEEEE GSHGKTTTTAFLGILFDKLGLNPNVIVGSSVKDFGDNSAIAGISDIFIVETCEYKKHFLY CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCCEEEEEEEECCCCEEEE FSPNMLILTNVDYEHVDFFKNYEALEDAFLQYINNLKKNGILIINSDDKNLLKIKSQINR ECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCC EDINIFSFGSRDLSNFQISNIVVKNEYFCFSFLGLYNIELRTVLFHNILNFSAALLALNL CCCEEEEECCCCCCCEEEEEEEEECCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHH FLESNGKSIFDFEEVVKRVAKNYSGIKRRSELIKEKKGVIYMDDYAHHPREIRATLFGIK HEECCCCEEECHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHH NFYKNKRIILDFMPHTFTRTKEFFDDFVEVLNIADVLILHNIYLSNRENFNPDELSFKLF HHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEE LNIKKINKNTYFFKDVKDSINFIKSLLISGDLFITMGAGNNFILHDFL EEEEEECCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA