Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

Click here to switch to the map view.

The map label for this gene is 51599067

Identifier: 51599067

GI number: 51599067

Start: 864596

End: 865537

Strand: Direct

Name: 51599067

Synonym: BG0841

Alternate gene names: NA

Gene position: 864596-865537 (Clockwise)

Preceding gene: 51599066

Following gene: 51599068

Centisome position: 95.62

GC content: 28.98

Gene sequence:

>942_bases
ATGAATTTTCAGAATTTTTCAAGTAATATTTTTTTAAAAAAAATATTAAGCAAGTTTAAAAACTTTGCAACTAGTATTAA
GCATAAGTTTGTTAGGGTTAAGGTGTATGCGTTGGTAGGATCTGCTGGAACTGGTAAGAGCTTTAGATCACATTTGGTAG
CAGATAAGTATTCAATACCTTTAATAATTGATGATGGTGTGTTAATTAAAAACATGAAAATTATTGCTGGGAGTTCTGCT
AAGTTTGAAGATAATGTTTTTAGGGCAGTAAAGCGATCTGTATTTGAAGATGATGCTCATTGCAGCGAAATGCTTGAAGT
TCTTGGAAAAGAAGAATTTAGTAAAATATTAATATTAGGAACAAGTCTTAAAATGATAGATAAAATAATTTCAAGACTTT
TATTGCCAAATGTTTTTAAGATCATTTACATAACAGATGTTTCAACCAGGCAGGAAATAGAAAAAGCAAGGATTTCAAGG
CAAATGGGGGAGCATGTTGTACCAGCAGCAGCTTTTGAAATAAAGTCTGTTAGACCTAATTTGCTATTAAACCCAATTAA
AGTTTTTTTTAAAAGCCGCTGGTTCTTTGCTAAGAAAAAAAATTATATTCGATCTGTTGTAAGGCCTCATTTTTATGAAG
AAGGGGTTTTATCTATTTCTAAGAGAGCTGTAAGGCAAATTATTGAACATTGTGTTTCTGAGTATGATAGAAGTTATATT
GTTTATGATCTTAAAATCAAAAAAGATGGAAGCAATTACCTTTTTAAGCTGTTTTTAAACATTCCTCTTGGGAACAACTT
ACTTAATAACACAGAAATGCTTAGAACTTATATTATTACTAACGTGCTTAAGTATACAATAATTAATATATCATCTATTG
ATATAGTTATACATAAATTTTATGACAAAAAAGATTATTTAGAAGAGAGTTATGAAGGTTGA

Upstream 100 bases:

>100_bases
TTTTTGGTAAAATTTAATGAAGCATTCTTTAAAAAGAATGAATTTTATGCTAAGCCTAGTTTAGAATTTCTAAAGCAAGC
AAAAGATATTTTTGGCGTTT

Downstream 100 bases:

>100_bases
TTTTGACAGTTTGAATAATATTTTTTTTGTAGGAATAAAGGGAAGCGGAGTTTGTTCTCTGGCTTGTTTTTTAAATTCAA
AAGGATATTTTGTAGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNFQNFSSNIFLKKILSKFKNFATSIKHKFVRVKVYALVGSAGTGKSFRSHLVADKYSIPLIIDDGVLIKNMKIIAGSSA
KFEDNVFRAVKRSVFEDDAHCSEMLEVLGKEEFSKILILGTSLKMIDKIISRLLLPNVFKIIYITDVSTRQEIEKARISR
QMGEHVVPAAAFEIKSVRPNLLLNPIKVFFKSRWFFAKKKNYIRSVVRPHFYEEGVLSISKRAVRQIIEHCVSEYDRSYI
VYDLKIKKDGSNYLFKLFLNIPLGNNLLNNTEMLRTYIITNVLKYTIINISSIDIVIHKFYDKKDYLEESYEG

Sequences:

>Translated_313_residues
MNFQNFSSNIFLKKILSKFKNFATSIKHKFVRVKVYALVGSAGTGKSFRSHLVADKYSIPLIIDDGVLIKNMKIIAGSSA
KFEDNVFRAVKRSVFEDDAHCSEMLEVLGKEEFSKILILGTSLKMIDKIISRLLLPNVFKIIYITDVSTRQEIEKARISR
QMGEHVVPAAAFEIKSVRPNLLLNPIKVFFKSRWFFAKKKNYIRSVVRPHFYEEGVLSISKRAVRQIIEHCVSEYDRSYI
VYDLKIKKDGSNYLFKLFLNIPLGNNLLNNTEMLRTYIITNVLKYTIINISSIDIVIHKFYDKKDYLEESYEG
>Mature_313_residues
MNFQNFSSNIFLKKILSKFKNFATSIKHKFVRVKVYALVGSAGTGKSFRSHLVADKYSIPLIIDDGVLIKNMKIIAGSSA
KFEDNVFRAVKRSVFEDDAHCSEMLEVLGKEEFSKILILGTSLKMIDKIISRLLLPNVFKIIYITDVSTRQEIEKARISR
QMGEHVVPAAAFEIKSVRPNLLLNPIKVFFKSRWFFAKKKNYIRSVVRPHFYEEGVLSISKRAVRQIIEHCVSEYDRSYI
VYDLKIKKDGSNYLFKLFLNIPLGNNLLNNTEMLRTYIITNVLKYTIINISSIDIVIHKFYDKKDYLEESYEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36221; Mature: 36221

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQNFSSNIFLKKILSKFKNFATSIKHKFVRVKVYALVGSAGTGKSFRSHLVADKYSIP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCC
LIIDDGVLIKNMKIIAGSSAKFEDNVFRAVKRSVFEDDAHCSEMLEVLGKEEFSKILILG
EEEECCEEEECEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCEEEEEC
TSLKMIDKIISRLLLPNVFKIIYITDVSTRQEIEKARISRQMGEHVVPAAAFEIKSVRPN
CCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
LLLNPIKVFFKSRWFFAKKKNYIRSVVRPHFYEEGVLSISKRAVRQIIEHCVSEYDRSYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VYDLKIKKDGSNYLFKLFLNIPLGNNLLNNTEMLRTYIITNVLKYTIINISSIDIVIHKF
EEEEEEEECCCCEEEEEEEECCCCCCHHCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH
YDKKDYLEESYEG
HCHHHHHHHCCCC
>Mature Secondary Structure
MNFQNFSSNIFLKKILSKFKNFATSIKHKFVRVKVYALVGSAGTGKSFRSHLVADKYSIP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCC
LIIDDGVLIKNMKIIAGSSAKFEDNVFRAVKRSVFEDDAHCSEMLEVLGKEEFSKILILG
EEEECCEEEECEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCEEEEEC
TSLKMIDKIISRLLLPNVFKIIYITDVSTRQEIEKARISRQMGEHVVPAAAFEIKSVRPN
CCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
LLLNPIKVFFKSRWFFAKKKNYIRSVVRPHFYEEGVLSISKRAVRQIIEHCVSEYDRSYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VYDLKIKKDGSNYLFKLFLNIPLGNNLLNNTEMLRTYIITNVLKYTIINISSIDIVIHKF
EEEEEEEECCCCEEEEEEEECCCCCCHHCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH
YDKKDYLEESYEG
HCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA