Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is yajC [C]

Identifier: 51598906

GI number: 51598906

Start: 692416

End: 692730

Strand: Direct

Name: yajC [C]

Synonym: BG0674

Alternate gene names: 51598906

Gene position: 692416-692730 (Clockwise)

Preceding gene: 51598905

Following gene: 161898744

Centisome position: 76.57

GC content: 26.03

Gene sequence:

>315_bases
GTGTTTTTATTGCAAGAATTTAGCAGCAATAGCATCTTTTTTCGAAGTTTATTGGTTTTTTTGCCTGTTATTGCTATATT
TTGGTTTTTAGTAATATTTCCTCAGCGCAAGGAAGAAAAGAATAAAAAAGAAATGATAAAAAATTTAAAAAAAGGCGATA
AGGTATTAACAATAGGTGGAATTTTTGGAGTTGTAAAAAAATTAGGTGATACGAATGTTATTTTAGAATTAAATCCAAAT
ATCGAAGCAGTATTTGTAAAAAACTCTATTGATAAAGTTTTGTCTGAAAAAAATGAAGTTAAAAAGGTGCTATAA

Upstream 100 bases:

>100_bases
ATTATACCAAAAAAGACGACTTTAAGCTTTTATTTGGGGTAGTTTATCCTGATGATATTAATAAGATAAAAGTGACATAT
GTATAGTAAGGGGAGGGTTT

Downstream 100 bases:

>100_bases
GGTATTATATAATTTAAGGTAAAATTAAAACTGTTAGCTAATAATGGTATTTATTAAAAATTTTAAGGATTTGTATAATG
AAAAAAGGATCTAAGCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MFLLQEFSSNSIFFRSLLVFLPVIAIFWFLVIFPQRKEEKNKKEMIKNLKKGDKVLTIGGIFGVVKKLGDTNVILELNPN
IEAVFVKNSIDKVLSEKNEVKKVL

Sequences:

>Translated_104_residues
MFLLQEFSSNSIFFRSLLVFLPVIAIFWFLVIFPQRKEEKNKKEMIKNLKKGDKVLTIGGIFGVVKKLGDTNVILELNPN
IEAVFVKNSIDKVLSEKNEVKKVL
>Mature_104_residues
MFLLQEFSSNSIFFRSLLVFLPVIAIFWFLVIFPQRKEEKNKKEMIKNLKKGDKVLTIGGIFGVVKKLGDTNVILELNPN
IEAVFVKNSIDKVLSEKNEVKKVL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11957; Mature: 11957

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLQEFSSNSIFFRSLLVFLPVIAIFWFLVIFPQRKEEKNKKEMIKNLKKGDKVLTIGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEHH
IFGVVKKLGDTNVILELNPNIEAVFVKNSIDKVLSEKNEVKKVL
HHHHHHHCCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFLLQEFSSNSIFFRSLLVFLPVIAIFWFLVIFPQRKEEKNKKEMIKNLKKGDKVLTIGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEHH
IFGVVKKLGDTNVILELNPNIEAVFVKNSIDKVLSEKNEVKKVL
HHHHHHHCCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]