Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is recG [H]
Identifier: 51598833
GI number: 51598833
Start: 598468
End: 600528
Strand: Direct
Name: recG [H]
Synonym: BG0593
Alternate gene names: 51598833
Gene position: 598468-600528 (Clockwise)
Preceding gene: 51598832
Following gene: 51598835
Centisome position: 66.18
GC content: 30.62
Gene sequence:
>2061_bases ATGTTTTTACATGAGTTTGAATATGAGCTTAAAGGTATAAGTGGCCTTGGTGAAAAAGGGGTTGAAAGGTTAAAAAATCT GCAAATTTTTAATGTTAAAGATCTTATTGAGTTTTTTCCTGTAAAATATGAAGATCGTCAAAATATACAAACTTTTCCAG ATTTTTCTAAGGTGAAAAGTTTTGATATGATGACGGTTTTCACTGTTATCGGGCATAAAAAATTTGGAGATAGTTCTAAA AAAAATTTAAAGTTAACGGCTAGAAGTATAAATGATGAGTCTTTCGAAATTCTACTTTTTAATAGGGCTTTTTTAGAGAA TGTTTTTAGAATAGATAAAAAATTCTATATTTATTCTAAATTTACTTATAATGATTATAGTGGGTTATGGAGTTGTTCTA ATTTTGATAGTGAAGTTTTTAGTGATAGTCCTGAAAGGTTTAAAAAAATTCTTCCGGTTTATTCTTTAACAGAAGGCTTA ACATCAAAGAAAATTTCATTATATGTAAGAGAAGCTCTTGAATATTTTTTTAAGTTTGGCCAAACAGATATTCCTAAATT TTTAATAGAAAAGTATTCTTTGTTGTCATTAAGCGAGGCTTTAAAAGAGATTCACTTCCCAAGTTCATTAGAAATGCTTG AAAGGGCAAAAAAAACTTTAATTTATAGAGAAATTTTCTTGCTTCAGTTTTTTTCAAGGTATAGATCTTCTAAGGTTCTT TTTCGAGAAAAAAAACATTTATCAAGAGATTTGCTTGAAAGAGTTGTTTTAAGTTTGCCCTTTGAGCTTACAGAAGATCA AAAAATTTCTGTTGATGAGATATTCTCAGATCTTAGCTCTTCTAAGCCAATGAATAGATTGCTTCAGGGTGATGTTGGAA GTGGCAAAACCCTTGTTGCCTTGCTTTCAGGGCTGCCTTTAATTGAAGCTGGATATCAAGTGGCATTTATGGCACCTACT GATCTTTTGGCTCGCCAACATTATGATAATTTATCCAACATATTGTCTTCTTTTAACATTTCAGTGACTCTTTTGACAGG TAGTTTAAAAAAGAAAGATAAAGAACAAGCATTAGAAAGTATTAAAAGTGGAGTTTCTGGTTTAATAGTTGGAACACATT CTATTTTTTACGAAAGTACAGAATTTAAAAGATTAGCATATGTTATTATTGACGAGCAGCATAAATTTGGAGTTGTTCAA AGAGAAGAGCTTAAAAATAAAGGAGAAGGGGTAGACATACTTTTAATGTCTGCAACGCCTATTCCTAGAAGCTTTGCGCT AACACTTTTTGGTGATCTTGAAGTCTCACTTATTAAAACCTTACCCAAGGGCCGTTTACCTATTACTACTTATTTGGCAA AACATGGCAATGAAGATAAAGTTTATGATTTTTTAAGAAAAGAGCTCTTAAAGGGTCATCAGGTTTACTTTGTTTATCCA TTAATTTCATCTTCAGAAAAATTCGAATTAAAAGACGTTAATAATATGTATTTAAAATTGAAGGAAGTGTTTAGCGAATA TGTTGTAGACATGCTTCATTCTAAGTTGCCATCTGATTTAAAAGAAGAAATTATGAAGAATTTTTATTCTAAAAAGGTAG ATATTTTGGTGGCTACTAGTGTTATTGAGGTGGGAATCGATTGTCCAAATGCAACTTGCATGGTGGTAGAGCATGCTGAG CGTTTTGGACTTTCTACTTTACATCAAATTAGAGGTCGTATTGGTAGAAGTAATTTGCAATCTTTCTTCTTTTTACTCTA TAAAGAGCCTTTGACAAGTGCTGGAAAATTTCGATTGAAAACCATAAAAGAAAATTTGGATGGATTTAAAATAGCAGAGG AGGATTTAAGGTTAAGAGGGCCTGGTAATTTATTTGGGCTTGAGCAAGCAGGGTATTTAAAATTAAAAATATCTAATTTT GTTGATGATAGAGATGTTATAGTTTTAATTCGAAAAGAACTCGACTTGTTTTTTGATGATAATTCTTCTTACGATAAGCT TGATATTGATTTGCTAGATAATCTTTTTTGTTCTTATTTGAATGTCGGAAGAAGTATTTAG
Upstream 100 bases:
>100_bases TATTGGGAGTGCTTTAATGGTAGCCTTTATAATCATTATTGAACAAGTTGTATTTGCTATTAGAGTTTTAGGAGAATATT TACCTTTTTAGGAGATTGGA
Downstream 100 bases:
>100_bases TTTGCTGGGTATTTTTCAATCAGGTTAATAAGGTTTGTTTTGTTATGATTCCAGAATTCAAGAAGCTTATGTTGTAAATT ATTAAAATATTTTTTCTGAA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MFLHEFEYELKGISGLGEKGVERLKNLQIFNVKDLIEFFPVKYEDRQNIQTFPDFSKVKSFDMMTVFTVIGHKKFGDSSK KNLKLTARSINDESFEILLFNRAFLENVFRIDKKFYIYSKFTYNDYSGLWSCSNFDSEVFSDSPERFKKILPVYSLTEGL TSKKISLYVREALEYFFKFGQTDIPKFLIEKYSLLSLSEALKEIHFPSSLEMLERAKKTLIYREIFLLQFFSRYRSSKVL FREKKHLSRDLLERVVLSLPFELTEDQKISVDEIFSDLSSSKPMNRLLQGDVGSGKTLVALLSGLPLIEAGYQVAFMAPT DLLARQHYDNLSNILSSFNISVTLLTGSLKKKDKEQALESIKSGVSGLIVGTHSIFYESTEFKRLAYVIIDEQHKFGVVQ REELKNKGEGVDILLMSATPIPRSFALTLFGDLEVSLIKTLPKGRLPITTYLAKHGNEDKVYDFLRKELLKGHQVYFVYP LISSSEKFELKDVNNMYLKLKEVFSEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATSVIEVGIDCPNATCMVVEHAE RFGLSTLHQIRGRIGRSNLQSFFFLLYKEPLTSAGKFRLKTIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKISNF VDDRDVIVLIRKELDLFFDDNSSYDKLDIDLLDNLFCSYLNVGRSI
Sequences:
>Translated_686_residues MFLHEFEYELKGISGLGEKGVERLKNLQIFNVKDLIEFFPVKYEDRQNIQTFPDFSKVKSFDMMTVFTVIGHKKFGDSSK KNLKLTARSINDESFEILLFNRAFLENVFRIDKKFYIYSKFTYNDYSGLWSCSNFDSEVFSDSPERFKKILPVYSLTEGL TSKKISLYVREALEYFFKFGQTDIPKFLIEKYSLLSLSEALKEIHFPSSLEMLERAKKTLIYREIFLLQFFSRYRSSKVL FREKKHLSRDLLERVVLSLPFELTEDQKISVDEIFSDLSSSKPMNRLLQGDVGSGKTLVALLSGLPLIEAGYQVAFMAPT DLLARQHYDNLSNILSSFNISVTLLTGSLKKKDKEQALESIKSGVSGLIVGTHSIFYESTEFKRLAYVIIDEQHKFGVVQ REELKNKGEGVDILLMSATPIPRSFALTLFGDLEVSLIKTLPKGRLPITTYLAKHGNEDKVYDFLRKELLKGHQVYFVYP LISSSEKFELKDVNNMYLKLKEVFSEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATSVIEVGIDCPNATCMVVEHAE RFGLSTLHQIRGRIGRSNLQSFFFLLYKEPLTSAGKFRLKTIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKISNF VDDRDVIVLIRKELDLFFDDNSSYDKLDIDLLDNLFCSYLNVGRSI >Mature_686_residues MFLHEFEYELKGISGLGEKGVERLKNLQIFNVKDLIEFFPVKYEDRQNIQTFPDFSKVKSFDMMTVFTVIGHKKFGDSSK KNLKLTARSINDESFEILLFNRAFLENVFRIDKKFYIYSKFTYNDYSGLWSCSNFDSEVFSDSPERFKKILPVYSLTEGL TSKKISLYVREALEYFFKFGQTDIPKFLIEKYSLLSLSEALKEIHFPSSLEMLERAKKTLIYREIFLLQFFSRYRSSKVL FREKKHLSRDLLERVVLSLPFELTEDQKISVDEIFSDLSSSKPMNRLLQGDVGSGKTLVALLSGLPLIEAGYQVAFMAPT DLLARQHYDNLSNILSSFNISVTLLTGSLKKKDKEQALESIKSGVSGLIVGTHSIFYESTEFKRLAYVIIDEQHKFGVVQ REELKNKGEGVDILLMSATPIPRSFALTLFGDLEVSLIKTLPKGRLPITTYLAKHGNEDKVYDFLRKELLKGHQVYFVYP LISSSEKFELKDVNNMYLKLKEVFSEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATSVIEVGIDCPNATCMVVEHAE RFGLSTLHQIRGRIGRSNLQSFFFLLYKEPLTSAGKFRLKTIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKISNF VDDRDVIVLIRKELDLFFDDNSSYDKLDIDLLDNLFCSYLNVGRSI
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=663, Percent_Identity=34.5399698340875, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI1787357, Length=382, Percent_Identity=34.5549738219895, Blast_Score=262, Evalue=5e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 79022; Mature: 79022
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLHEFEYELKGISGLGEKGVERLKNLQIFNVKDLIEFFPVKYEDRQNIQTFPDFSKVKS CCCCHHHHHHCCCCCCCHHHHHHHHCCEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHH FDMMTVFTVIGHKKFGDSSKKNLKLTARSINDESFEILLFNRAFLENVFRIDKKFYIYSK HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHCCEEEEEEE FTYNDYSGLWSCSNFDSEVFSDSPERFKKILPVYSLTEGLTSKKISLYVREALEYFFKFG EEECCCCCCEECCCCCHHHHCCCHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCC QTDIPKFLIEKYSLLSLSEALKEIHFPSSLEMLERAKKTLIYREIFLLQFFSRYRSSKVL CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FREKKHLSRDLLERVVLSLPFELTEDQKISVDEIFSDLSSSKPMNRLLQGDVGSGKTLVA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHH LLSGLPLIEAGYQVAFMAPTDLLARQHYDNLSNILSSFNISVTLLTGSLKKKDKEQALES HHCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHCCHHHHHHHH IKSGVSGLIVGTHSIFYESTEFKRLAYVIIDEQHKFGVVQREELKNKGEGVDILLMSATP HHCCCCEEEEEEHHHEECCCCCCEEEEEEEECCCCCCCEEHHHHHCCCCCEEEEEEECCC IPRSFALTLFGDLEVSLIKTLPKGRLPITTYLAKHGNEDKVYDFLRKELLKGHQVYFVYP CCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEE LISSSEKFELKDVNNMYLKLKEVFSEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATS EECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEH VIEVGIDCPNATCMVVEHAERFGLSTLHQIRGRIGRSNLQSFFFLLYKEPLTSAGKFRLK HHHHCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEHH TIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKISNFVDDRDVIVLIRKELDLFFDD HHHHCCCCCEEECCCCEECCCCCEECCCCCCEEEEEECCCCCCCCEEEEEEECCCEEECC NSSYDKLDIDLLDNLFCSYLNVGRSI CCCCCEEHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFLHEFEYELKGISGLGEKGVERLKNLQIFNVKDLIEFFPVKYEDRQNIQTFPDFSKVKS CCCCHHHHHHCCCCCCCHHHHHHHHCCEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHH FDMMTVFTVIGHKKFGDSSKKNLKLTARSINDESFEILLFNRAFLENVFRIDKKFYIYSK HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHCCEEEEEEE FTYNDYSGLWSCSNFDSEVFSDSPERFKKILPVYSLTEGLTSKKISLYVREALEYFFKFG EEECCCCCCEECCCCCHHHHCCCHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCC QTDIPKFLIEKYSLLSLSEALKEIHFPSSLEMLERAKKTLIYREIFLLQFFSRYRSSKVL CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FREKKHLSRDLLERVVLSLPFELTEDQKISVDEIFSDLSSSKPMNRLLQGDVGSGKTLVA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCHHHHH LLSGLPLIEAGYQVAFMAPTDLLARQHYDNLSNILSSFNISVTLLTGSLKKKDKEQALES HHCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHCCHHHHHHHH IKSGVSGLIVGTHSIFYESTEFKRLAYVIIDEQHKFGVVQREELKNKGEGVDILLMSATP HHCCCCEEEEEEHHHEECCCCCCEEEEEEEECCCCCCCEEHHHHHCCCCCEEEEEEECCC IPRSFALTLFGDLEVSLIKTLPKGRLPITTYLAKHGNEDKVYDFLRKELLKGHQVYFVYP CCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEE LISSSEKFELKDVNNMYLKLKEVFSEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATS EECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEH VIEVGIDCPNATCMVVEHAERFGLSTLHQIRGRIGRSNLQSFFFLLYKEPLTSAGKFRLK HHHHCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEHH TIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKISNFVDDRDVIVLIRKELDLFFDD HHHHCCCCCEEECCCCEECCCCCEECCCCCCEEEEEECCCCCCCCEEEEEEECCCEEECC NSSYDKLDIDLLDNLFCSYLNVGRSI CCCCCEEHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]