Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598832
Identifier: 51598832
GI number: 51598832
Start: 597877
End: 598458
Strand: Direct
Name: 51598832
Synonym: BG0592
Alternate gene names: NA
Gene position: 597877-598458 (Clockwise)
Preceding gene: 51598831
Following gene: 51598833
Centisome position: 66.12
GC content: 25.95
Gene sequence:
>582_bases GTGTTAGTTGTTTTAATAGAAACTTTAATGGTATTTTTACAGATTTATAGGATTTTAATTTTAGTTAGAATCATTCTTAG CTGGCTTGTGTCCTCGGGGATTAATACTAATGTATTTTTCAGATTTATATATATTGTAACAGAACCATTTTTATCTTTTT TTAGAAGAATTCCTTTTTTTACATTTGGCATGTTTGATTTTTCTCCAATTGCAGCTTTAATAACTTTAACTATTTTGGAA AGAATGTTGGCTTATGGGAATTATAAGCTTTCTACATTTATTATTTTATTTATTGTTGAAATTTGGGGGATATTTAGAAG CATTTTTATTGCTATAGTTTTCTTTTTATTATTGAGATTGTTATTATTGCTTTTAAATTTGTTCCAAGGTTCAGACTTTT TTAAAACAGTCGATTCATTTTTAATTCCTTTATCTACTAGGATAAGTGGTGTAATTACTGACAAACATATGTCTTATACT TCACGTTTAATTATTGGGAGTGCTTTAATGGTAGCCTTTATAATCATTATTGAACAAGTTGTATTTGCTATTAGAGTTTT AGGAGAATATTTACCTTTTTAG
Upstream 100 bases:
>100_bases AAATGAATTCAATTTTGAATTTTGTGCCAGATGAAGACAAGCTTGATAAATTGAGGCGGTGTATGATAGTTGAAGATGTT TGGGTTGATTAGGAGGTGCT
Downstream 100 bases:
>100_bases GAGATTGGAATGTTTTTACATGAGTTTGAATATGAGCTTAAAGGTATAAGTGGCCTTGGTGAAAAAGGGGTTGAAAGGTT AAAAAATCTGCAAATTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLVVLIETLMVFLQIYRILILVRIILSWLVSSGINTNVFFRFIYIVTEPFLSFFRRIPFFTFGMFDFSPIAALITLTILE RMLAYGNYKLSTFIILFIVEIWGIFRSIFIAIVFFLLLRLLLLLLNLFQGSDFFKTVDSFLIPLSTRISGVITDKHMSYT SRLIIGSALMVAFIIIIEQVVFAIRVLGEYLPF
Sequences:
>Translated_193_residues MLVVLIETLMVFLQIYRILILVRIILSWLVSSGINTNVFFRFIYIVTEPFLSFFRRIPFFTFGMFDFSPIAALITLTILE RMLAYGNYKLSTFIILFIVEIWGIFRSIFIAIVFFLLLRLLLLLLNLFQGSDFFKTVDSFLIPLSTRISGVITDKHMSYT SRLIIGSALMVAFIIIIEQVVFAIRVLGEYLPF >Mature_193_residues MLVVLIETLMVFLQIYRILILVRIILSWLVSSGINTNVFFRFIYIVTEPFLSFFRRIPFFTFGMFDFSPIAALITLTILE RMLAYGNYKLSTFIILFIVEIWGIFRSIFIAIVFFLLLRLLLLLLNLFQGSDFFKTVDSFLIPLSTRISGVITDKHMSYT SRLIIGSALMVAFIIIIEQVVFAIRVLGEYLPF
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22426; Mature: 22426
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVLIETLMVFLQIYRILILVRIILSWLVSSGINTNVFFRFIYIVTEPFLSFFRRIPFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TFGMFDFSPIAALITLTILERMLAYGNYKLSTFIILFIVEIWGIFRSIFIAIVFFLLLRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLLLNLFQGSDFFKTVDSFLIPLSTRISGVITDKHMSYTSRLIIGSALMVAFIIIIEQV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAIRVLGEYLPF HHHHHHHHHHCCC >Mature Secondary Structure MLVVLIETLMVFLQIYRILILVRIILSWLVSSGINTNVFFRFIYIVTEPFLSFFRRIPFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TFGMFDFSPIAALITLTILERMLAYGNYKLSTFIILFIVEIWGIFRSIFIAIVFFLLLRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLLLNLFQGSDFFKTVDSFLIPLSTRISGVITDKHMSYTSRLIIGSALMVAFIIIIEQV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAIRVLGEYLPF HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA