Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is yeeO [C]

Identifier: 51598835

GI number: 51598835

Start: 601450

End: 602787

Strand: Direct

Name: yeeO [C]

Synonym: BG0595

Alternate gene names: 51598835

Gene position: 601450-602787 (Clockwise)

Preceding gene: 51598833

Following gene: 51598836

Centisome position: 66.51

GC content: 28.03

Gene sequence:

>1338_bases
ATGATCAAAAAGTTTAAAAATTATGATCAGATAATAAAAGAGCTATTTATTATAGCTATTCCTACAGCTTTTGAATCGCT
TTTATTTCAAATGGTAACTTTTTTTGATAATTTTATGATCTCCTATTTGGGTTCTTTTCATATTACAGGAGTTTCTTTAG
CAAATAGAGTAACTTTTCTTTTTTTTATTATTGTGTTTGGACTTGGTACAGCTTTAAGCGCTTACGTGTCCCAAGCAATT
GCAAAAAAGAAGTTTCTTCAAATAAGACAATCTTTTGCTTATATATTATCAATTGGAACTACAATAGGAATAATTTTTTT
TATATTTTCATTTTTTTTCCCAAAAAACATTCTTAGACTATTCACAGCTAATCAGAATTCTTTAAATTTTGGATCAGAAT
ATTTAAAAATTATTTCATGGTCTTATGTGTTAATGGCATATTCTTTTTTATCAGCTATGGGGTTTAAGAGTGCTAAAGAA
GTAAAAATACCTTTGTATGTTACTTCTATTGTTGTTTTAATAAATATTGTTTTTAATTATATTTTTATTTTTGGTTTTAG
CATGGGAATAAAAGGTGTTGCATATGCTACTGTGCTTGCTAGAATTATTGAGTTTGTTTTTTATTTTTTATACAGCTTGA
TAGGTGACAATTCATATTATCGGATTAAGTTTAGCGATTTTTTTGCTTCAAAGATAGTTACTAGAGCTAATTTGAAACTA
ATTATACCTGTTTTATCGCATGAGATTTTTTGGGTATTAAGTATAACTATTTTGCATGCATTTTATGCTCGTGTTGGGAG
TATTGAATACGCTTCATTTGCTGTTGCATCAAATCTTTTTGACATTTGTTTTGTATTGCTTCATGGCATGGGACTTGCAA
CAGGCGTTGTTATTGGGCATTTAATGATTCATGATAAAAAACATGTTAGGTCAGTTGGATTTTTTTTATCTTTTTTAGGA
TTTCTTTTGGGTATTTTTGTAGCTATTTTGCTTATTGGGATATCGGGCTTTGCACCTTATATTTTTAGTAAGTTAAATTC
TCCTAAACTTGTTAGTGTTTTTATTTATGTTTTTGCAAGTATTGTAGTTTTTAAAGCTTTTACGTTGCAAGTTCTTGTTG
GTGTTTTTAGGGCCAGCGGTATCCCAAATGTTTGTTTTTTTATTGAATCAGGGGTAATTGTTTTTTATACGCTTCCGGTT
GCTTATTTATTAGTGTTTTATACAAATTTAAGTTTGCCAATAGTGGTTTTTATTGTAAATGCTGAAGAGATCATTAAAAA
TATATTCATCACGATTGAATTTTTTCATGATGATTGGATACGAGAGATTGATTATTAA

Upstream 100 bases:

>100_bases
ATAGTTAATTCTAATTATATATGTATATATAATATGTATATTCCAGATTGGGTTAAGTTTACTTAAAAGTAATAAATAAA
GGAGAGTGTATATAGGGAAT

Downstream 100 bases:

>100_bases
GAGCTTGATTTAGTGATAGAGCAGTATGATATATTTGGTGTTAATAAAAATTTTAATGATCTTGGTTGGTCTATAATTCA
TTCTGATTATACTGATTTAA

Product: MATE efflux family protein

Products: NA

Alternate protein names: Na+ Driven Multidrug Efflux Pump; Na+-Driven Multidrug Efflux Pump; Mate Efflux Family Protein; Adhesin; Cation Efflux Pump; Multi Antimicrobial Extrusion Protein MatE; MATE Family Multidrug Efflux Pumps; MatE Efflux Family Protein; Drug/Sodium Antiporter; NorM Na+-Driven Multidrug Efflux Pump; MOP/MATE Family Multidrug-Resistance Efflux Pump; MATE Efflux Family Protein Subfamily; Multidrug ABC Transporter; ABC Transporter Releated Protein; Multi Anti Extrusion Family Protein; MOP/MATE Superfamily Multidrug-Resistance Efflux Pump NorM; Cation Efflux Protein; MATE Family Transporter; Multidrug Efflux Pump

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFLFFIIVFGLGTALSAYVSQAI
AKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRLFTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKE
VKIPLYVTSIVVLINIVFNYIFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL
IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGHLMIHDKKHVRSVGFFLSFLG
FLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFASIVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPV
AYLLVFYTNLSLPIVVFIVNAEEIIKNIFITIEFFHDDWIREIDY

Sequences:

>Translated_445_residues
MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFLFFIIVFGLGTALSAYVSQAI
AKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRLFTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKE
VKIPLYVTSIVVLINIVFNYIFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL
IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGHLMIHDKKHVRSVGFFLSFLG
FLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFASIVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPV
AYLLVFYTNLSLPIVVFIVNAEEIIKNIFITIEFFHDDWIREIDY
>Mature_445_residues
MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFLFFIIVFGLGTALSAYVSQAI
AKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRLFTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKE
VKIPLYVTSIVVLINIVFNYIFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL
IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGHLMIHDKKHVRSVGFFLSFLG
FLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFASIVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPV
AYLLVFYTNLSLPIVVFIVNAEEIIKNIFITIEFFHDDWIREIDY

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50553; Mature: 50553

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH
FFIIVFGLGTALSAYVSQAIAKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKEVKIPLYVTSIVVLINIVFNY
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH
IFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHE
IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGH
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIHDKKHVRSVGFFLSFLGFLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFAS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPVAYLLVFYTNLSLPIVVFIVN
HHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHEEHHHHHHHHHHHHHCCCCEEEEEEEC
AEEIIKNIFITIEFFHDDWIREIDY
HHHHHHHHHHHEEEHHHHHHHHCCC
>Mature Secondary Structure
MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH
FFIIVFGLGTALSAYVSQAIAKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKEVKIPLYVTSIVVLINIVFNY
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH
IFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHE
IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGH
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIHDKKHVRSVGFFLSFLGFLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFAS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPVAYLLVFYTNLSLPIVVFIVN
HHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHEEHHHHHHHHHHHHHCCCCEEEEEEEC
AEEIIKNIFITIEFFHDDWIREIDY
HHHHHHHHHHHEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA