Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is yeeO [C]
Identifier: 51598835
GI number: 51598835
Start: 601450
End: 602787
Strand: Direct
Name: yeeO [C]
Synonym: BG0595
Alternate gene names: 51598835
Gene position: 601450-602787 (Clockwise)
Preceding gene: 51598833
Following gene: 51598836
Centisome position: 66.51
GC content: 28.03
Gene sequence:
>1338_bases ATGATCAAAAAGTTTAAAAATTATGATCAGATAATAAAAGAGCTATTTATTATAGCTATTCCTACAGCTTTTGAATCGCT TTTATTTCAAATGGTAACTTTTTTTGATAATTTTATGATCTCCTATTTGGGTTCTTTTCATATTACAGGAGTTTCTTTAG CAAATAGAGTAACTTTTCTTTTTTTTATTATTGTGTTTGGACTTGGTACAGCTTTAAGCGCTTACGTGTCCCAAGCAATT GCAAAAAAGAAGTTTCTTCAAATAAGACAATCTTTTGCTTATATATTATCAATTGGAACTACAATAGGAATAATTTTTTT TATATTTTCATTTTTTTTCCCAAAAAACATTCTTAGACTATTCACAGCTAATCAGAATTCTTTAAATTTTGGATCAGAAT ATTTAAAAATTATTTCATGGTCTTATGTGTTAATGGCATATTCTTTTTTATCAGCTATGGGGTTTAAGAGTGCTAAAGAA GTAAAAATACCTTTGTATGTTACTTCTATTGTTGTTTTAATAAATATTGTTTTTAATTATATTTTTATTTTTGGTTTTAG CATGGGAATAAAAGGTGTTGCATATGCTACTGTGCTTGCTAGAATTATTGAGTTTGTTTTTTATTTTTTATACAGCTTGA TAGGTGACAATTCATATTATCGGATTAAGTTTAGCGATTTTTTTGCTTCAAAGATAGTTACTAGAGCTAATTTGAAACTA ATTATACCTGTTTTATCGCATGAGATTTTTTGGGTATTAAGTATAACTATTTTGCATGCATTTTATGCTCGTGTTGGGAG TATTGAATACGCTTCATTTGCTGTTGCATCAAATCTTTTTGACATTTGTTTTGTATTGCTTCATGGCATGGGACTTGCAA CAGGCGTTGTTATTGGGCATTTAATGATTCATGATAAAAAACATGTTAGGTCAGTTGGATTTTTTTTATCTTTTTTAGGA TTTCTTTTGGGTATTTTTGTAGCTATTTTGCTTATTGGGATATCGGGCTTTGCACCTTATATTTTTAGTAAGTTAAATTC TCCTAAACTTGTTAGTGTTTTTATTTATGTTTTTGCAAGTATTGTAGTTTTTAAAGCTTTTACGTTGCAAGTTCTTGTTG GTGTTTTTAGGGCCAGCGGTATCCCAAATGTTTGTTTTTTTATTGAATCAGGGGTAATTGTTTTTTATACGCTTCCGGTT GCTTATTTATTAGTGTTTTATACAAATTTAAGTTTGCCAATAGTGGTTTTTATTGTAAATGCTGAAGAGATCATTAAAAA TATATTCATCACGATTGAATTTTTTCATGATGATTGGATACGAGAGATTGATTATTAA
Upstream 100 bases:
>100_bases ATAGTTAATTCTAATTATATATGTATATATAATATGTATATTCCAGATTGGGTTAAGTTTACTTAAAAGTAATAAATAAA GGAGAGTGTATATAGGGAAT
Downstream 100 bases:
>100_bases GAGCTTGATTTAGTGATAGAGCAGTATGATATATTTGGTGTTAATAAAAATTTTAATGATCTTGGTTGGTCTATAATTCA TTCTGATTATACTGATTTAA
Product: MATE efflux family protein
Products: NA
Alternate protein names: Na+ Driven Multidrug Efflux Pump; Na+-Driven Multidrug Efflux Pump; Mate Efflux Family Protein; Adhesin; Cation Efflux Pump; Multi Antimicrobial Extrusion Protein MatE; MATE Family Multidrug Efflux Pumps; MatE Efflux Family Protein; Drug/Sodium Antiporter; NorM Na+-Driven Multidrug Efflux Pump; MOP/MATE Family Multidrug-Resistance Efflux Pump; MATE Efflux Family Protein Subfamily; Multidrug ABC Transporter; ABC Transporter Releated Protein; Multi Anti Extrusion Family Protein; MOP/MATE Superfamily Multidrug-Resistance Efflux Pump NorM; Cation Efflux Protein; MATE Family Transporter; Multidrug Efflux Pump
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFLFFIIVFGLGTALSAYVSQAI AKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRLFTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKE VKIPLYVTSIVVLINIVFNYIFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGHLMIHDKKHVRSVGFFLSFLG FLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFASIVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPV AYLLVFYTNLSLPIVVFIVNAEEIIKNIFITIEFFHDDWIREIDY
Sequences:
>Translated_445_residues MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFLFFIIVFGLGTALSAYVSQAI AKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRLFTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKE VKIPLYVTSIVVLINIVFNYIFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGHLMIHDKKHVRSVGFFLSFLG FLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFASIVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPV AYLLVFYTNLSLPIVVFIVNAEEIIKNIFITIEFFHDDWIREIDY >Mature_445_residues MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFLFFIIVFGLGTALSAYVSQAI AKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRLFTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKE VKIPLYVTSIVVLINIVFNYIFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGHLMIHDKKHVRSVGFFLSFLG FLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFASIVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPV AYLLVFYTNLSLPIVVFIVNAEEIIKNIFITIEFFHDDWIREIDY
Specific function: Unknown
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50553; Mature: 50553
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH FFIIVFGLGTALSAYVSQAIAKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKEVKIPLYVTSIVVLINIVFNY HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH IFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHE IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGH EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMIHDKKHVRSVGFFLSFLGFLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFAS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPVAYLLVFYTNLSLPIVVFIVN HHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHEEHHHHHHHHHHHHHCCCCEEEEEEEC AEEIIKNIFITIEFFHDDWIREIDY HHHHHHHHHHHEEEHHHHHHHHCCC >Mature Secondary Structure MIKKFKNYDQIIKELFIIAIPTAFESLLFQMVTFFDNFMISYLGSFHITGVSLANRVTFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHH FFIIVFGLGTALSAYVSQAIAKKKFLQIRQSFAYILSIGTTIGIIFFIFSFFFPKNILRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTANQNSLNFGSEYLKIISWSYVLMAYSFLSAMGFKSAKEVKIPLYVTSIVVLINIVFNY HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH IFIFGFSMGIKGVAYATVLARIIEFVFYFLYSLIGDNSYYRIKFSDFFASKIVTRANLKL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHE IIPVLSHEIFWVLSITILHAFYARVGSIEYASFAVASNLFDICFVLLHGMGLATGVVIGH EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMIHDKKHVRSVGFFLSFLGFLLGIFVAILLIGISGFAPYIFSKLNSPKLVSVFIYVFAS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IVVFKAFTLQVLVGVFRASGIPNVCFFIESGVIVFYTLPVAYLLVFYTNLSLPIVVFIVN HHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHEEHHHHHHHHHHHHHCCCCEEEEEEEC AEEIIKNIFITIEFFHDDWIREIDY HHHHHHHHHHHEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA