Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598806
Identifier: 51598806
GI number: 51598806
Start: 569787
End: 570254
Strand: Direct
Name: 51598806
Synonym: BG0565
Alternate gene names: NA
Gene position: 569787-570254 (Clockwise)
Preceding gene: 51598805
Following gene: 51598807
Centisome position: 63.01
GC content: 24.36
Gene sequence:
>468_bases TTGATATTAATTAATTTCAATCTAAATGGAGAGAGTATTTCAAAAAAGATTAGTCTTTCTTTGGGCACTAGAAGTCTTTT GGATTCTATTTTTTTTGCCAAGAGTAATAGTTTAGAGTATATTGTTAATAACAGATTTTTTTTAATTTTATTGGATTTTA GACTTGTGTATTCTCATTTAATTCCTGCTTTTATTTTAAATGGTCGTAGTGTAGTTACTCTTGAAGGACTTAAGAAAACA AATTTTTATCAGCACATGCAAAATATTTTATTAGAAGATGATTTTAATTTTTGCAGCAATTGTTTTGAGTCTAATATTTT GTTGTTTTATTACTTTTTGGAAAACAAGATTGTAAGCAAATCAGATATTTTAGGCTATAGAAATTCATTAAAATGTAATT GTATGGATGTTAATACTTTTTTATCTCTCTATTTGAAAGCTGAAGAATTGTATAGAAAAAATGGTTAA
Upstream 100 bases:
>100_bases GTTTCTGCAATTCGGACTGCTTTGATTCAGATATTTGATTTTAATGCAGGCAGCACGCCTCTTAATTTTGAAGAAATTTT AAATAGTTGGAGTGTAAAAA
Downstream 100 bases:
>100_bases TGTAAAGGTTTATTATCCTGAAAATTTTAATATACTATCTAATTTATTTAACAAAAATTTAAATAATTATATTATTTATA ATGAGCTAGATTTTAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MILINFNLNGESISKKISLSLGTRSLLDSIFFAKSNSLEYIVNNRFFLILLDFRLVYSHLIPAFILNGRSVVTLEGLKKT NFYQHMQNILLEDDFNFCSNCFESNILLFYYFLENKIVSKSDILGYRNSLKCNCMDVNTFLSLYLKAEELYRKNG
Sequences:
>Translated_155_residues MILINFNLNGESISKKISLSLGTRSLLDSIFFAKSNSLEYIVNNRFFLILLDFRLVYSHLIPAFILNGRSVVTLEGLKKT NFYQHMQNILLEDDFNFCSNCFESNILLFYYFLENKIVSKSDILGYRNSLKCNCMDVNTFLSLYLKAEELYRKNG >Mature_155_residues MILINFNLNGESISKKISLSLGTRSLLDSIFFAKSNSLEYIVNNRFFLILLDFRLVYSHLIPAFILNGRSVVTLEGLKKT NFYQHMQNILLEDDFNFCSNCFESNILLFYYFLENKIVSKSDILGYRNSLKCNCMDVNTFLSLYLKAEELYRKNG
Specific function: Unknown
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18061; Mature: 18061
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILINFNLNGESISKKISLSLGTRSLLDSIFFAKSNSLEYIVNNRFFLILLDFRLVYSHL CEEEEECCCCHHHHHEEEEECCHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHH IPAFILNGRSVVTLEGLKKTNFYQHMQNILLEDDFNFCSNCFESNILLFYYFLENKIVSK HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCCC SDILGYRNSLKCNCMDVNTFLSLYLKAEELYRKNG HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILINFNLNGESISKKISLSLGTRSLLDSIFFAKSNSLEYIVNNRFFLILLDFRLVYSHL CEEEEECCCCHHHHHEEEEECCHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHH IPAFILNGRSVVTLEGLKKTNFYQHMQNILLEDDFNFCSNCFESNILLFYYFLENKIVSK HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCCC SDILGYRNSLKCNCMDVNTFLSLYLKAEELYRKNG HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA