Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598805
Identifier: 51598805
GI number: 51598805
Start: 567938
End: 569800
Strand: Direct
Name: 51598805
Synonym: BG0564
Alternate gene names: NA
Gene position: 567938-569800 (Clockwise)
Preceding gene: 51598803
Following gene: 51598806
Centisome position: 62.81
GC content: 24.91
Gene sequence:
>1863_bases TTGACAAATGTTGATGCATATGAATTTTGGGCTTTGCCAGTTTGCTGTAATGTTAAAGATTCTTTTATTGAAGATTTTAG CTTTGTAGATGAACATTTAAGTTCAATTTTTAGTATCAGTTATAAAGACAATATAACTTTAAAGTTTAGGGATTTTGTTG ATTCTAATGAATTTAATTTAAAGCTTTTTGACAATAAAGTAAGCTTTGAGGGTCAGATTCCCTTGGTTTTGTATTCAGAT AATTTGGAGTATTTGCTAAAAGCAGAAAAAAGTGTTCTTTTTAATTTAAGAATTAGTGATGGTAGTAATAATTATTCCCC TAGATTTGAAAAGAAAGAATCTGGAGATTGTAATGCCTTGAATGCTTGTTATGAATTTAGTGATTACAATAGTTTTCCAG ATGACTTTATTTTGGTTAAAATATTTTTTGATTCTGAAAATTTAATTATTGATGCTAATGTAGACAATATTTCTTTTTTA AAATTTTTTATTAGTGAAAATTTTAGTGTGAATAAAGACAAAATCACAATCAATTCTCTTAATAATTATTGGTCTAGTTC TATTTTTCCTGTTTCTTTTAATGCAATTTTACAGGGCATTGTAATTTCAAAAAAAATTAATAAAAGGGTTAATGTTATTT ACTACAAAAGGCATTTTAGAATTTTAGATAATTTAAATTTAACTTTTTCAGTTTCTAATTGTTTATTGGCGGATAACAAG CTTTCAAAAGTTATTTTAGAAATTATAATAAATAGACCTTTAAATTTTTTATATAAGTTTTATTTTAAATTTATTAATAA TATTTTTAAAAATTTGTTTTTTGATGGGTTTTTAGAAATTTTTTTTGTTGAAAATAAAAGTGATTTCATATTTTTTTATG ACAATCTTTTAGCATTTGAGACTTCGGTTTATAATTTTATTTATTCTAATTTTTATAATCTTGCTTTAGCGATGCCTTGT GAGCCAATAGGTTATTTGCTTACACAGATTAAAGGTGATTATAGCAGGTTTTTTAAAATTTTTAAAAGATTAGATTTAAA GAATTCTTTAATAAAGAAATCTTCTGTTATAAGTGTTAATAAAAATTATGATATTTTTGACACTAGTCGCAGGGGAGTCG GTTTTGCTTATTTGAATTCAAATGCTTATTTTTTAAGTGGTGAGCAATATGTTGTTGCTTTCTTATATAAGGATGGATTA AATATATTTTTGCCTTACAGTATTATTGACAACAATTTAAGCAACTATTTGAAAAATAGCTTAGCTAAAACATTGGGCCT AGCCTATAACAGTATAAATTTTTTGATAGATGGGAGTTCATTAGATTTTACTAATTTTTATAGTCTTCTTTTTAAAGATC CTTATTTGATTGAAAAAGCAATTTTAACCATTAAGGATAATTTTTCTTCTTTGATAAGTACGGGCTTTATAAGTGAATAT CCTGTTATTTTTAAAGAAAAAATAGCTAATGAATATGTTAATGATTGCGTGCTTGGATGTTCTGTTGAGCTTAAATTTGA ATTTTATTCTCTTAATGCTGTTTTTACTAATGTAAGTTTTTTTGTAGAGCAAGGCAAGTTTACCAAGCTTAAGTTAAATA ACAAAAGAATTCGTACAATATTTGGGTTAGCAGTTGATTATGTATTTTGCAGTGCTAATGTAAATTGTGATATTAAAGAT TGTTTAAGCTTAGAGTTTATTGAAGATGGCGAGTTTGTTTTTTCTTTTAGAAGTTTTTTTATCGTTTCTGTTTCTGCAAT TCGGACTGCTTTGATTCAGATATTTGATTTTAATGCAGGCAGCACGCCTCTTAATTTTGAAGAAATTTTAAATAGTTGGA GTGTAAAAATTGATATTAATTAA
Upstream 100 bases:
>100_bases AGGTCAGCTGTTTTTGAAGTTTTATTTTTCAATCCTTTTTACTTATTTAATGCTATGTTCTTACTAATTAAATTTTTTTG TTTAGTTGGAGTTTGCGAGT
Downstream 100 bases:
>100_bases TTTCAATCTAAATGGAGAGAGTATTTCAAAAAAGATTAGTCTTTCTTTGGGCACTAGAAGTCTTTTGGATTCTATTTTTT TTGCCAAGAGTAATAGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MTNVDAYEFWALPVCCNVKDSFIEDFSFVDEHLSSIFSISYKDNITLKFRDFVDSNEFNLKLFDNKVSFEGQIPLVLYSD NLEYLLKAEKSVLFNLRISDGSNNYSPRFEKKESGDCNALNACYEFSDYNSFPDDFILVKIFFDSENLIIDANVDNISFL KFFISENFSVNKDKITINSLNNYWSSSIFPVSFNAILQGIVISKKINKRVNVIYYKRHFRILDNLNLTFSVSNCLLADNK LSKVILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFETSVYNFIYSNFYNLALAMPC EPIGYLLTQIKGDYSRFFKIFKRLDLKNSLIKKSSVISVNKNYDIFDTSRRGVGFAYLNSNAYFLSGEQYVVAFLYKDGL NIFLPYSIIDNNLSNYLKNSLAKTLGLAYNSINFLIDGSSLDFTNFYSLLFKDPYLIEKAILTIKDNFSSLISTGFISEY PVIFKEKIANEYVNDCVLGCSVELKFEFYSLNAVFTNVSFFVEQGKFTKLKLNNKRIRTIFGLAVDYVFCSANVNCDIKD CLSLEFIEDGEFVFSFRSFFIVSVSAIRTALIQIFDFNAGSTPLNFEEILNSWSVKIDIN
Sequences:
>Translated_620_residues MTNVDAYEFWALPVCCNVKDSFIEDFSFVDEHLSSIFSISYKDNITLKFRDFVDSNEFNLKLFDNKVSFEGQIPLVLYSD NLEYLLKAEKSVLFNLRISDGSNNYSPRFEKKESGDCNALNACYEFSDYNSFPDDFILVKIFFDSENLIIDANVDNISFL KFFISENFSVNKDKITINSLNNYWSSSIFPVSFNAILQGIVISKKINKRVNVIYYKRHFRILDNLNLTFSVSNCLLADNK LSKVILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFETSVYNFIYSNFYNLALAMPC EPIGYLLTQIKGDYSRFFKIFKRLDLKNSLIKKSSVISVNKNYDIFDTSRRGVGFAYLNSNAYFLSGEQYVVAFLYKDGL NIFLPYSIIDNNLSNYLKNSLAKTLGLAYNSINFLIDGSSLDFTNFYSLLFKDPYLIEKAILTIKDNFSSLISTGFISEY PVIFKEKIANEYVNDCVLGCSVELKFEFYSLNAVFTNVSFFVEQGKFTKLKLNNKRIRTIFGLAVDYVFCSANVNCDIKD CLSLEFIEDGEFVFSFRSFFIVSVSAIRTALIQIFDFNAGSTPLNFEEILNSWSVKIDIN >Mature_619_residues TNVDAYEFWALPVCCNVKDSFIEDFSFVDEHLSSIFSISYKDNITLKFRDFVDSNEFNLKLFDNKVSFEGQIPLVLYSDN LEYLLKAEKSVLFNLRISDGSNNYSPRFEKKESGDCNALNACYEFSDYNSFPDDFILVKIFFDSENLIIDANVDNISFLK FFISENFSVNKDKITINSLNNYWSSSIFPVSFNAILQGIVISKKINKRVNVIYYKRHFRILDNLNLTFSVSNCLLADNKL SKVILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFETSVYNFIYSNFYNLALAMPCE PIGYLLTQIKGDYSRFFKIFKRLDLKNSLIKKSSVISVNKNYDIFDTSRRGVGFAYLNSNAYFLSGEQYVVAFLYKDGLN IFLPYSIIDNNLSNYLKNSLAKTLGLAYNSINFLIDGSSLDFTNFYSLLFKDPYLIEKAILTIKDNFSSLISTGFISEYP VIFKEKIANEYVNDCVLGCSVELKFEFYSLNAVFTNVSFFVEQGKFTKLKLNNKRIRTIFGLAVDYVFCSANVNCDIKDC LSLEFIEDGEFVFSFRSFFIVSVSAIRTALIQIFDFNAGSTPLNFEEILNSWSVKIDIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71844; Mature: 71713
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVDAYEFWALPVCCNVKDSFIEDFSFVDEHLSSIFSISYKDNITLKFRDFVDSNEFNL CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCEEE KLFDNKVSFEGQIPLVLYSDNLEYLLKAEKSVLFNLRISDGSNNYSPRFEKKESGDCNAL EEECCEECCCCCEEEEEECCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHH NACYEFSDYNSFPDDFILVKIFFDSENLIIDANVDNISFLKFFISENFSVNKDKITINSL HHHEEECCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHHEEECCCCCCCCCCEEEEECC NNYWSSSIFPVSFNAILQGIVISKKINKRVNVIYYKRHFRILDNLNLTFSVSNCLLADNK CCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCEEEEEECCEEECCCH LSKVILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEECCHHHHH TSVYNFIYSNFYNLALAMPCEPIGYLLTQIKGDYSRFFKIFKRLDLKNSLIKKSSVISVN HHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCEEEEC KNYDIFDTSRRGVGFAYLNSNAYFLSGEQYVVAFLYKDGLNIFLPYSIIDNNLSNYLKNS CCCCEEECCCCCEEEEEEECCEEEEECCCEEEEEEEECCCCEEEEHHHHHCHHHHHHHHH LAKTLGLAYNSINFLIDGSSLDFTNFYSLLFKDPYLIEKAILTIKDNFSSLISTGFISEY HHHHHHHHEECEEEEEECCCCCHHHHHHHHHCCCHHEEHHHEEEECCHHHHHHHCCCCCC PVIFKEKIANEYVNDCVLGCSVELKFEFYSLNAVFTNVSFFVEQGKFTKLKLNNKRIRTI CHHHHHHHHHHHHHHHEEECEEEEEEEEEEEEEEEEEEEEEEECCCEEEEEECCCEEHHH FGLAVDYVFCSANVNCDIKDCLSLEFIEDGEFVFSFRSFFIVSVSAIRTALIQIFDFNAG HHHHEEEEEEECCCCCCHHHCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHEEECCCC STPLNFEEILNSWSVKIDIN CCCCCHHHHHCCCEEEEEEC >Mature Secondary Structure TNVDAYEFWALPVCCNVKDSFIEDFSFVDEHLSSIFSISYKDNITLKFRDFVDSNEFNL CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCEEE KLFDNKVSFEGQIPLVLYSDNLEYLLKAEKSVLFNLRISDGSNNYSPRFEKKESGDCNAL EEECCEECCCCCEEEEEECCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHH NACYEFSDYNSFPDDFILVKIFFDSENLIIDANVDNISFLKFFISENFSVNKDKITINSL HHHEEECCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHHEEECCCCCCCCCCEEEEECC NNYWSSSIFPVSFNAILQGIVISKKINKRVNVIYYKRHFRILDNLNLTFSVSNCLLADNK CCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCEEEEEECCEEECCCH LSKVILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEECCHHHHH TSVYNFIYSNFYNLALAMPCEPIGYLLTQIKGDYSRFFKIFKRLDLKNSLIKKSSVISVN HHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCEEEEC KNYDIFDTSRRGVGFAYLNSNAYFLSGEQYVVAFLYKDGLNIFLPYSIIDNNLSNYLKNS CCCCEEECCCCCEEEEEEECCEEEEECCCEEEEEEEECCCCEEEEHHHHHCHHHHHHHHH LAKTLGLAYNSINFLIDGSSLDFTNFYSLLFKDPYLIEKAILTIKDNFSSLISTGFISEY HHHHHHHHEECEEEEEECCCCCHHHHHHHHHCCCHHEEHHHEEEECCHHHHHHHCCCCCC PVIFKEKIANEYVNDCVLGCSVELKFEFYSLNAVFTNVSFFVEQGKFTKLKLNNKRIRTI CHHHHHHHHHHHHHHHEEECEEEEEEEEEEEEEEEEEEEEEEECCCEEEEEECCCEEHHH FGLAVDYVFCSANVNCDIKDCLSLEFIEDGEFVFSFRSFFIVSVSAIRTALIQIFDFNAG HHHHEEEEEEECCCCCCHHHCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHEEECCCC STPLNFEEILNSWSVKIDIN CCCCCHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA