Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598807
Identifier: 51598807
GI number: 51598807
Start: 570247
End: 571116
Strand: Direct
Name: 51598807
Synonym: BG0566
Alternate gene names: NA
Gene position: 570247-571116 (Clockwise)
Preceding gene: 51598806
Following gene: 51598808
Centisome position: 63.06
GC content: 21.72
Gene sequence:
>870_bases ATGGTTAATGTAAAGGTTTATTATCCTGAAAATTTTAATATACTATCTAATTTATTTAACAAAAATTTAAATAATTATAT TATTTATAATGAGCTAGATTTTAAAAAAAATCCTAATTTGTTTAATAGGGAAACGCCTATTGATAATTTTTTTCTTGTTG GTAATTTTGAAAAATTTAATAAGGTATCTTTAAGGGGTAATTTTCTTGAGATGGGACCTTGTGTTACTTACAACGAGATA CTTAAGATTGGTAAGAAAAATATTCCAAGTCTTTTTTATGAATTTATTTCAAAATTTAATGATAAAATATATTTAAATAG TATTAACCTTGCAAATGGGTTTTATTATAAAAACACTATTTTTGATATTTATCCTTTATTATTAAGCCTTGATGCACAAA TTGAGTTTAAAAATGTTTTAACCAAAAAAACTTATGTTTTTAGTGCTTACAATTTAAATAGAGCTGAGTATATTGCAAAC CGAAGTACTGTTCTTGTTACTAAATTTAAATTTCCAATGATGAATCTATGCAACAGAAGCTTTTATCATAAAGTATTTTT CAATACCTTATCTTTTGATATTTTAGAAGAAGCGAACATTATCTTTATATGCATTCTTTTAAACATAAAAAGAGATGTTA TAAATGATTTTTTGTTAAAAATATTTTATGATGATAAGGTGATTGTCATCAAGGATTTTCAGATTTTACTTTTAAATAAA TCTTTGCCGCTTTCATTTTCTGAGATAGAAAATTCTCTTAAAATGTTGGATAAAAACATAAGAGATTCTAAAAATTTTAA TATAGGAGAGAGAAATTTAAAGCTAATAAAGAATTTTTATTTAGATATATTAATGAATTTTAATTTTTAA
Upstream 100 bases:
>100_bases TCAGATATTTTAGGCTATAGAAATTCATTAAAATGTAATTGTATGGATGTTAATACTTTTTTATCTCTCTATTTGAAAGC TGAAGAATTGTATAGAAAAA
Downstream 100 bases:
>100_bases TAGTTCGAATAAGTTTAATTACTATCTTTATTATGCTATATTTCTTATATAAAGGGAATATATAATTTATTTTTATGTAT TATAATGTAAAAAGTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MVNVKVYYPENFNILSNLFNKNLNNYIIYNELDFKKNPNLFNRETPIDNFFLVGNFEKFNKVSLRGNFLEMGPCVTYNEI LKIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTIFDIYPLLLSLDAQIEFKNVLTKKTYVFSAYNLNRAEYIAN RSTVLVTKFKFPMMNLCNRSFYHKVFFNTLSFDILEEANIIFICILLNIKRDVINDFLLKIFYDDKVIVIKDFQILLLNK SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMNFNF
Sequences:
>Translated_289_residues MVNVKVYYPENFNILSNLFNKNLNNYIIYNELDFKKNPNLFNRETPIDNFFLVGNFEKFNKVSLRGNFLEMGPCVTYNEI LKIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTIFDIYPLLLSLDAQIEFKNVLTKKTYVFSAYNLNRAEYIAN RSTVLVTKFKFPMMNLCNRSFYHKVFFNTLSFDILEEANIIFICILLNIKRDVINDFLLKIFYDDKVIVIKDFQILLLNK SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMNFNF >Mature_289_residues MVNVKVYYPENFNILSNLFNKNLNNYIIYNELDFKKNPNLFNRETPIDNFFLVGNFEKFNKVSLRGNFLEMGPCVTYNEI LKIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTIFDIYPLLLSLDAQIEFKNVLTKKTYVFSAYNLNRAEYIAN RSTVLVTKFKFPMMNLCNRSFYHKVFFNTLSFDILEEANIIFICILLNIKRDVINDFLLKIFYDDKVIVIKDFQILLLNK SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMNFNF
Specific function: Unknown
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34362; Mature: 34362
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNVKVYYPENFNILSNLFNKNLNNYIIYNELDFKKNPNLFNRETPIDNFFLVGNFEKFN CEEEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHC KVSLRGNFLEMGPCVTYNEILKIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTI EEEECCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEEHHHH FDIYPLLLSLDAQIEFKNVLTKKTYVFSAYNLNRAEYIANRSTVLVTKFKFPMMNLCNRS HHHHHHHHHCCCCEEHHHHHHHHEEEEEEECCCHHHHHCCCCEEEEEEECCHHHHHHCHH FYHKVFFNTLSFDILEEANIIFICILLNIKRDVINDFLLKIFYDDKVIVIKDFQILLLNK HHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHEEEECCEEEEEECEEEEEECC SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMNFNF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure MVNVKVYYPENFNILSNLFNKNLNNYIIYNELDFKKNPNLFNRETPIDNFFLVGNFEKFN CEEEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHC KVSLRGNFLEMGPCVTYNEILKIGKKNIPSLFYEFISKFNDKIYLNSINLANGFYYKNTI EEEECCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEEHHHH FDIYPLLLSLDAQIEFKNVLTKKTYVFSAYNLNRAEYIANRSTVLVTKFKFPMMNLCNRS HHHHHHHHHCCCCEEHHHHHHHHEEEEEEECCCHHHHHCCCCEEEEEEECCHHHHHHCHH FYHKVFFNTLSFDILEEANIIFICILLNIKRDVINDFLLKIFYDDKVIVIKDFQILLLNK HHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHEEEECCEEEEEECEEEEEECC SLPLSFSEIENSLKMLDKNIRDSKNFNIGERNLKLIKNFYLDILMNFNF CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA