| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is cbiH [H]
Identifier: 50841905
GI number: 50841905
Start: 465566
End: 468136
Strand: Direct
Name: cbiH [H]
Synonym: PPA0422
Alternate gene names: 50841905
Gene position: 465566-468136 (Clockwise)
Preceding gene: 50841904
Following gene: 50841906
Centisome position: 18.18
GC content: 62.7
Gene sequence:
>2571_bases ATGATTCGCGTCCACGGATATCTCGGCACTATTAGCGACGCCCTGCGCGAGGAAGTTACCCAGGCTGATCTCGTCGTCGG TGGTCAGCGTCACCTTGATGCCCTCGCTGTCCCCGACGATAAGCGTCAGAAACTTGGACTTATCGGGCCTGCCATTGAGC GGATCCAGTCGCTGCCTGACGACGCCAACGTCGTTGTTATCGCCTCCGGTGACCCGCTGTTTTTCGGTGTGGTTCGCCGG ATCCGACAGGCCGGTTTGCGTGTCGAGGTGGTGACGGCTCCGACCTCTTTGCAGGCAGCGTTCGCCGCGGTCGCCCTGCC GTGGGATGACGCCCAGTTTGTCTCCTCCCACTCCAAGGACATCGAAACGGCCGTTCGGCTTGCGAAGATCCATCCCAAGG TTGGCGTGCTGACGGCGCCCAATCGAGGTCTCGCTGAGCTGGTTGATGGGCTTGCAGGTCGCGGCAAGACCTTCGTGCTG GCCGAGAAGATCGGTGAAGAGGGTCAGCGAGTACGCGTTCTGGACGAGGACGCTGCCAAAGCCGTTATCGCCGATGAGGA CATCCTTAGCCCCAACGTCGTGCTGGTGCTTGAGCACCACCCGGATTCTCCGGAGGCCCTCGGTATCAACCCCGAGCTCG CTGGTGATGTCAACGTCAACGGTCCCGACGACCCGCAGCCAGGTTCCGACACCAACCCCGACGGTTCCGACCGTGATCCG ATCATCGGACAGATCATCAACTCCGACGCTGCCGTAGCCCACGCCGAGGCCATTGACCGCGCTCTCAAGCGTGAGACGAA GAAGTATGTCGGGCCATCGCGCACCGGTCTGGCCGCCGCATGGGGGGAGTGCGATCTCATCGTTTCCCACTTGGCCCTGG GCGCTACTACGCGGATCATTGCCCCACTACTGGAGTCCAAGAAGACTGACCCGGGAGTGGTCGTCGTTGACGAGGCTGGA CGCTTCGCCATCCCGTTGGTGGGTGGTCACGTCGGTGGAGCCAACGAACTCTCCCGCACCGTTGCCGAGGCCCTCAGCGG CACCGCCGTTGTCTCCACCGCTACCGACTCCCTCGGTGTACCGGCCCTCGACCAGCTTGGCTGGGCCTACGAGGGTGATG TCGCGGGTGTAACCGGATCGATCATCGCCGGACGTCCGGTGCTCGTCGTCCGCGAGCAGCCTTGGCCGTTGCCCCCGCTA CCCCAGAACGTCACCGAGGACGTCGAGACCCCGGCTGCCCGGGTTATCGTTTCCGAGCGGGTTGCAGAGCGCGTCTTCGT CGATCACGGTGACGACCTGCCTACCGTTGTCTTGCATCCGAGCTGTCTAGTCGTTGGGATGGGATGCAACAAGGGCACCG AGGTCGAGTCGCTGCGTCAACTCCTCGTTAAGACTTTGGAGGATAACGGCCTGGCTCTCGGTTCGGTGACCCGCTTGGTG TCCCACGAGGTTAAGGCCGGCGAGCTTGGTTTGGTGAAGCTGGCTAACCAACTCGGTGTGGAATATCGCACTGAGTCCGC CGAGGCTCTGGCCGCCCACGATGTCCCGACACCTTCCGACGTCGTTGCCCGGGAGGTCGGGACGCCGAGCGTCAGTGAGG CCGCGGTGTTGTGCCAGGGGGCCGAGTTGCTGGTACATAAGACCAAAACCTCGGAGGCTACCTGCGCCATCGGCCGCATC CCGGCACGTGGCCATCTGTCGGTGGTTGGGCTCGGACCGGGCTCCCGTGATCTGCTGACTCCGCGCGCCGTCGAGGCCAT CCGCAATGCGACTTTCGTTGCCGGCTACGCCCCCTACGTGCGTCAGATACGAGACCTGGTGCGCCCAGGGGCCACAATCC TGGCCACCAAGATGGGCACCGAAGAAGAGCGCACTCAGGCCGCTATCGAGGCCACCCGGGACGGCCGCAATGTAGCTTTC GTGTGTGGTGGCGACCCGGCCATCTACGCGATGGCCTCCCCTACTCTGGAGATGGGTACCGACGGTATCGACGTCGAGAT CGTCCCTGGAGTCACCGCTGAGCTCGCCATCTCGGCGATCCTCGGTGCTCCGTTGGGACATGATCACGCCACTATCTCCC TGTCGGACCTGCATACCGACTGGGACCTCATTCTCAAGCGCGTAAAGGCGGCTGCTGAGGGAGACCTCGTCACCACCTTC TATAACCCGCGTTCGCGCACTCGTACCCACCAGCTCCCTGATGCCCTGGCGATCATGGCCGAGCACCGTCCGCCTTCCAC CCCGGTGGCCCTGGTCTCCCACGCTGAGCGCCGTCAACAGCAAGTGATCATGTCTACCCTCGAAGAGTTCAAGCCCGAGT GGTGTGGCATGACAACCTTGGTTGTCGTCGGCTCGACGACGACCAAGTACGTCAGCTCCGGTGATGGACGACGTCTCATG GTCACCCCGCGTGACTACCACTGGATGGACGGGCACGTGTGTAGCGAGGCTCGCAAGAATTACACCCACAAGGACTTGCC CAAGGCCGACGAAGAGACTTATCTCTCCAAGCCTCCGGTTCACTCCACTCGCATGTCTGAGCCCATAAACGACACAAAGG ATTCGAAATGA
Upstream 100 bases:
>100_bases ATCGCGCAGCCGACGCTCAGGCCCACGCTGACCTCAAGGCTCACGGTACCTGCGGCGTCTACCACCGGAACTCCACGAAC CCCGACACGAAGGGCAATTC
Downstream 100 bases:
>100_bases CCGATCCCCTCACCAGCGGAACTCCGCTGGTCATCGCTGCCCACGGCACCCGCGACGAGGCAGGTGTGGCCGAGTGCCGT GCTTTGGCTGAGCGCGTTGC
Product: tetrapyrrole methylase, putative CbiE/G/H fusion protein
Products: 2S-adenosyl-L-homocysteine; precorrin; sirohydrochlorin; NADH; Proton; siroheme [C]
Alternate protein names: Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MIRVHGYLGTISDALREEVTQADLVVGGQRHLDALAVPDDKRQKLGLIGPAIERIQSLPDDANVVVIASGDPLFFGVVRR IRQAGLRVEVVTAPTSLQAAFAAVALPWDDAQFVSSHSKDIETAVRLAKIHPKVGVLTAPNRGLAELVDGLAGRGKTFVL AEKIGEEGQRVRVLDEDAAKAVIADEDILSPNVVLVLEHHPDSPEALGINPELAGDVNVNGPDDPQPGSDTNPDGSDRDP IIGQIINSDAAVAHAEAIDRALKRETKKYVGPSRTGLAAAWGECDLIVSHLALGATTRIIAPLLESKKTDPGVVVVDEAG RFAIPLVGGHVGGANELSRTVAEALSGTAVVSTATDSLGVPALDQLGWAYEGDVAGVTGSIIAGRPVLVVREQPWPLPPL PQNVTEDVETPAARVIVSERVAERVFVDHGDDLPTVVLHPSCLVVGMGCNKGTEVESLRQLLVKTLEDNGLALGSVTRLV SHEVKAGELGLVKLANQLGVEYRTESAEALAAHDVPTPSDVVAREVGTPSVSEAAVLCQGAELLVHKTKTSEATCAIGRI PARGHLSVVGLGPGSRDLLTPRAVEAIRNATFVAGYAPYVRQIRDLVRPGATILATKMGTEEERTQAAIEATRDGRNVAF VCGGDPAIYAMASPTLEMGTDGIDVEIVPGVTAELAISAILGAPLGHDHATISLSDLHTDWDLILKRVKAAAEGDLVTTF YNPRSRTRTHQLPDALAIMAEHRPPSTPVALVSHAERRQQQVIMSTLEEFKPEWCGMTTLVVVGSTTTKYVSSGDGRRLM VTPRDYHWMDGHVCSEARKNYTHKDLPKADEETYLSKPPVHSTRMSEPINDTKDSK
Sequences:
>Translated_856_residues MIRVHGYLGTISDALREEVTQADLVVGGQRHLDALAVPDDKRQKLGLIGPAIERIQSLPDDANVVVIASGDPLFFGVVRR IRQAGLRVEVVTAPTSLQAAFAAVALPWDDAQFVSSHSKDIETAVRLAKIHPKVGVLTAPNRGLAELVDGLAGRGKTFVL AEKIGEEGQRVRVLDEDAAKAVIADEDILSPNVVLVLEHHPDSPEALGINPELAGDVNVNGPDDPQPGSDTNPDGSDRDP IIGQIINSDAAVAHAEAIDRALKRETKKYVGPSRTGLAAAWGECDLIVSHLALGATTRIIAPLLESKKTDPGVVVVDEAG RFAIPLVGGHVGGANELSRTVAEALSGTAVVSTATDSLGVPALDQLGWAYEGDVAGVTGSIIAGRPVLVVREQPWPLPPL PQNVTEDVETPAARVIVSERVAERVFVDHGDDLPTVVLHPSCLVVGMGCNKGTEVESLRQLLVKTLEDNGLALGSVTRLV SHEVKAGELGLVKLANQLGVEYRTESAEALAAHDVPTPSDVVAREVGTPSVSEAAVLCQGAELLVHKTKTSEATCAIGRI PARGHLSVVGLGPGSRDLLTPRAVEAIRNATFVAGYAPYVRQIRDLVRPGATILATKMGTEEERTQAAIEATRDGRNVAF VCGGDPAIYAMASPTLEMGTDGIDVEIVPGVTAELAISAILGAPLGHDHATISLSDLHTDWDLILKRVKAAAEGDLVTTF YNPRSRTRTHQLPDALAIMAEHRPPSTPVALVSHAERRQQQVIMSTLEEFKPEWCGMTTLVVVGSTTTKYVSSGDGRRLM VTPRDYHWMDGHVCSEARKNYTHKDLPKADEETYLSKPPVHSTRMSEPINDTKDSK >Mature_856_residues MIRVHGYLGTISDALREEVTQADLVVGGQRHLDALAVPDDKRQKLGLIGPAIERIQSLPDDANVVVIASGDPLFFGVVRR IRQAGLRVEVVTAPTSLQAAFAAVALPWDDAQFVSSHSKDIETAVRLAKIHPKVGVLTAPNRGLAELVDGLAGRGKTFVL AEKIGEEGQRVRVLDEDAAKAVIADEDILSPNVVLVLEHHPDSPEALGINPELAGDVNVNGPDDPQPGSDTNPDGSDRDP IIGQIINSDAAVAHAEAIDRALKRETKKYVGPSRTGLAAAWGECDLIVSHLALGATTRIIAPLLESKKTDPGVVVVDEAG RFAIPLVGGHVGGANELSRTVAEALSGTAVVSTATDSLGVPALDQLGWAYEGDVAGVTGSIIAGRPVLVVREQPWPLPPL PQNVTEDVETPAARVIVSERVAERVFVDHGDDLPTVVLHPSCLVVGMGCNKGTEVESLRQLLVKTLEDNGLALGSVTRLV SHEVKAGELGLVKLANQLGVEYRTESAEALAAHDVPTPSDVVAREVGTPSVSEAAVLCQGAELLVHKTKTSEATCAIGRI PARGHLSVVGLGPGSRDLLTPRAVEAIRNATFVAGYAPYVRQIRDLVRPGATILATKMGTEEERTQAAIEATRDGRNVAF VCGGDPAIYAMASPTLEMGTDGIDVEIVPGVTAELAISAILGAPLGHDHATISLSDLHTDWDLILKRVKAAAEGDLVTTF YNPRSRTRTHQLPDALAIMAEHRPPSTPVALVSHAERRQQQVIMSTLEEFKPEWCGMTTLVVVGSTTTKYVSSGDGRRLM VTPRDYHWMDGHVCSEARKNYTHKDLPKADEETYLSKPPVHSTRMSEPINDTKDSK
Specific function: Methyltransferase that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789768, Length=224, Percent_Identity=31.25, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: 2.1.1.107; 1.3.1.76; 4.99.1.4 [C]
Molecular weight: Translated: 90970; Mature: 90970
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVHGYLGTISDALREEVTQADLVVGGQRHLDALAVPDDKRQKLGLIGPAIERIQSLPD CEEEEEEHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHHCCCCCHHHHHHHHCCC DANVVVIASGDPLFFGVVRRIRQAGLRVEVVTAPTSLQAAFAAVALPWDDAQFVSSHSKD CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHEEECCCCCHHHHHHCCHH IETAVRLAKIHPKVGVLTAPNRGLAELVDGLAGRGKTFVLAEKIGEEGQRVRVLDEDAAK HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEECCCCCC AVIADEDILSPNVVLVLEHHPDSPEALGINPELAGDVNVNGPDDPQPGSDTNPDGSDRDP EEECCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC IIGQIINSDAAVAHAEAIDRALKRETKKYVGPSRTGLAAAWGECDLIVSHLALGATTRII HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH APLLESKKTDPGVVVVDEAGRFAIPLVGGHVGGANELSRTVAEALSGTAVVSTATDSLGV HHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC PALDQLGWAYEGDVAGVTGSIIAGRPVLVVREQPWPLPPLPQNVTEDVETPAARVIVSER CCHHHCCCEECCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHH VAERVFVDHGDDLPTVVLHPSCLVVGMGCNKGTEVESLRQLLVKTLEDNGLALGSVTRLV HHHHHHHCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH SHEVKAGELGLVKLANQLGVEYRTESAEALAAHDVPTPSDVVAREVGTPSVSEAAVLCQG HHCCCCCCCHHHHHHHHHCCEEECCCCHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCC AELLVHKTKTSEATCAIGRIPARGHLSVVGLGPGSRDLLTPRAVEAIRNATFVAGYAPYV CEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCEEEECCHHHH RQIRDLVRPGATILATKMGTEEERTQAAIEATRDGRNVAFVCGGDPAIYAMASPTLEMGT HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHCCC DGIDVEIVPGVTAELAISAILGAPLGHDHATISLSDLHTDWDLILKRVKAAAEGDLVTTF CCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEEE YNPRSRTRTHQLPDALAIMAEHRPPSTPVALVSHAERRQQQVIMSTLEEFKPEWCGMTTL ECCCCCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEE VVVGSTTTKYVSSGDGRRLMVTPRDYHWMDGHVCSEARKNYTHKDLPKADEETYLSKPPV EEECCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCC HSTRMSEPINDTKDSK CCHHCCCCCCCCCCCC >Mature Secondary Structure MIRVHGYLGTISDALREEVTQADLVVGGQRHLDALAVPDDKRQKLGLIGPAIERIQSLPD CEEEEEEHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHHCCCCCHHHHHHHHCCC DANVVVIASGDPLFFGVVRRIRQAGLRVEVVTAPTSLQAAFAAVALPWDDAQFVSSHSKD CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHEEECCCCCHHHHHHCCHH IETAVRLAKIHPKVGVLTAPNRGLAELVDGLAGRGKTFVLAEKIGEEGQRVRVLDEDAAK HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEECCCCCC AVIADEDILSPNVVLVLEHHPDSPEALGINPELAGDVNVNGPDDPQPGSDTNPDGSDRDP EEECCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC IIGQIINSDAAVAHAEAIDRALKRETKKYVGPSRTGLAAAWGECDLIVSHLALGATTRII HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH APLLESKKTDPGVVVVDEAGRFAIPLVGGHVGGANELSRTVAEALSGTAVVSTATDSLGV HHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC PALDQLGWAYEGDVAGVTGSIIAGRPVLVVREQPWPLPPLPQNVTEDVETPAARVIVSER CCHHHCCCEECCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHH VAERVFVDHGDDLPTVVLHPSCLVVGMGCNKGTEVESLRQLLVKTLEDNGLALGSVTRLV HHHHHHHCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHH SHEVKAGELGLVKLANQLGVEYRTESAEALAAHDVPTPSDVVAREVGTPSVSEAAVLCQG HHCCCCCCCHHHHHHHHHCCEEECCCCHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCC AELLVHKTKTSEATCAIGRIPARGHLSVVGLGPGSRDLLTPRAVEAIRNATFVAGYAPYV CEEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCEEEECCHHHH RQIRDLVRPGATILATKMGTEEERTQAAIEATRDGRNVAFVCGGDPAIYAMASPTLEMGT HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHCCC DGIDVEIVPGVTAELAISAILGAPLGHDHATISLSDLHTDWDLILKRVKAAAEGDLVTTF CCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEEE YNPRSRTRTHQLPDALAIMAEHRPPSTPVALVSHAERRQQQVIMSTLEEFKPEWCGMTTL ECCCCCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEE VVVGSTTTKYVSSGDGRRLMVTPRDYHWMDGHVCSEARKNYTHKDLPKADEETYLSKPPV EEECCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCC HSTRMSEPINDTKDSK CCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2S-Adenosyl-L-methionine; uroporphyrin III; dihydrosirohydrochlorin; NAD; sirohydrochlorin; Fe (II) [C]
Specific reaction: 2S-Adenosyl-L-methionine + uroporphyrin III = 2S-adenosyl-L-homocysteine + precorrin dihydrosirohydrochlorin + NAD = sirohydrochlorin + NADH sirohydrochlorin + Fe (II) = 2 Proton + siroheme [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]