| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50841613
Identifier: 50841613
GI number: 50841613
Start: 146394
End: 147767
Strand: Reverse
Name: 50841613
Synonym: PPA0122
Alternate gene names: NA
Gene position: 147767-146394 (Counterclockwise)
Preceding gene: 50841619
Following gene: 50841604
Centisome position: 5.77
GC content: 65.57
Gene sequence:
>1374_bases ATGAAAACCTGTAATGAGCGTCCTCTCACCAGTCGCCCCACCGTGCGTCCTGGCTCGCCGTGGTCCTTTCCACAGTGCCT CGTCGAGACCCTGCCAACCGGCCTCACGGTAGTGCGCGTTCCGATGCCTGGCCAGCGCATCGTCACTATGGAAATCGGGT TGGAAGCGCCCCTGTGTGCCGAACCTGCTGGTCTCGAGGGCCTTGCTGGGCTCGTCGTCCGCACAGCTGACGAATCCACC GGCCCCCATCCCGGCGCAGCTTTCGCTGAGGCCATGGAGTCGATCGGGGCCAGCTACGACGGCTCGGCCGGGTTAGCCGG AAGCCACGTCGGCGTCGATGTGCCCGTGACAAGGTTCGATGCAGCGGCTGAACTCTTCGTCGAATTGTTGAACACCACGA GCCTGGTCGAAGAGGACATCGCTCGTCAGATCGACGCGGCGCGAGCCTCCCTGGCCCAGACCAGCCAGCGCGGATCGTCC CTAGCCGAGATGGCAGCAGCACGGGCGCTATGGCCAGTGGGGTCACGGTCGTCCCTGCCCACGATCGGTACCCTCTCGTC GGTAGAAAAGCTCAACGCTGCAGCCGCACGAGAATTCTGGGCCGCGCACTGGACGATCTCCGATGCCGTGCTGGTGGTTG CCGGAGAGGGAGTCGAGGACCTCGACTTGTCAATATTCAAGGAGTGGACGACCAGCGGTTCCCCCTCGCAGGTTGCTCCA CTCCAGCCACGCCTCGACGGACCACGGGTGATTCTTGTCGACCGCCCCGACGCTGTGCAGGCCGACGTGCGTATCCAGCA GGCCACTGTGGGGCGCTCCCACCCGGGTTGGGCTGCCCTCAAGGTCGCATGCGGAGCCCTCGGCGGAACGTTCGGGTCGC GTCTCAACCAGGTGCTGCGGGAAGACAAGGGATGGTCTTACGGGGTCGGAATGTCGAGCCGCCCACTCCCCGATGGTGGA GTGGCGACCGTTGCGGGGTCCTTCCGCACTGAGGTTGGAGCCGACGCCGTGGCCGAGGCATTACGCATTCTCACCTCCAG CGACGACCTGAGGGCCGACGAAGTGGATGCCGCCCGCGACCACTCGGTTGGCATCGCCCCATTGCAGTACGACACCGCCG GTGCGGTCGCCCACCAAGTGGCAGCTCTGGTCGGGGCCGGACTGGCACCGAACTGGGTCGACGATCACCTCGCCGCCGTG GCATCAGCGAGGGCGAGTGCTGGGGAATGGTCGGTGAACCGAGCCTGGCGGGAGTTGCTGATCCCCGACAGCTGGCGGAT CGCTATCTGCGGTCAGGCCGAAGAGTTGGCTCCCGCACTGGCTGAGCGTGGACTCGAGGCCGTTATCGTTAGTCCCGCCG AGGTGTTGTCGTAA
Upstream 100 bases:
>100_bases TCGACCGCATCCGGGCTATCACCGCGGACCACATTGCCGAAGCCGCAAGACGGTGGCTATCCCCCCATCAAGCGTCAACC GTCGTCCACCAGGAGGCGTG
Downstream 100 bases:
>100_bases CCGGGCCGATGCGTCGCAAACTGCCCCGAAAACGCGATGGTACCGTCACAATCTCGACTTTTTGGCAGGACCAGACGGCA TTGCGCGAGGCTTCGACTCG
Product: M16 family peptidase
Products: NA
Alternate protein names: M16 Family Peptidase; Protease; Zinc Protease; Zn-Dependent Peptidase; Peptidase M; Proteinase; Metallopeptidase; Protease Insulinase Family/Protease Insulinase Family; Insulinase-Like Peptidase M; Exported Pepdidase Zinc Protease; Zinc-Dependent Peptidase Lipo Family Protein; Insulinase Family; M16B Family Peptidase; Zn Dependant Peptidase; M16 Family Metallopeptidase; Insulinase Family Protease; Secreted Zinc Protease
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKTCNERPLTSRPTVRPGSPWSFPQCLVETLPTGLTVVRVPMPGQRIVTMEIGLEAPLCAEPAGLEGLAGLVVRTADEST GPHPGAAFAEAMESIGASYDGSAGLAGSHVGVDVPVTRFDAAAELFVELLNTTSLVEEDIARQIDAARASLAQTSQRGSS LAEMAAARALWPVGSRSSLPTIGTLSSVEKLNAAAAREFWAAHWTISDAVLVVAGEGVEDLDLSIFKEWTTSGSPSQVAP LQPRLDGPRVILVDRPDAVQADVRIQQATVGRSHPGWAALKVACGALGGTFGSRLNQVLREDKGWSYGVGMSSRPLPDGG VATVAGSFRTEVGADAVAEALRILTSSDDLRADEVDAARDHSVGIAPLQYDTAGAVAHQVAALVGAGLAPNWVDDHLAAV ASARASAGEWSVNRAWRELLIPDSWRIAICGQAEELAPALAERGLEAVIVSPAEVLS
Sequences:
>Translated_457_residues MKTCNERPLTSRPTVRPGSPWSFPQCLVETLPTGLTVVRVPMPGQRIVTMEIGLEAPLCAEPAGLEGLAGLVVRTADEST GPHPGAAFAEAMESIGASYDGSAGLAGSHVGVDVPVTRFDAAAELFVELLNTTSLVEEDIARQIDAARASLAQTSQRGSS LAEMAAARALWPVGSRSSLPTIGTLSSVEKLNAAAAREFWAAHWTISDAVLVVAGEGVEDLDLSIFKEWTTSGSPSQVAP LQPRLDGPRVILVDRPDAVQADVRIQQATVGRSHPGWAALKVACGALGGTFGSRLNQVLREDKGWSYGVGMSSRPLPDGG VATVAGSFRTEVGADAVAEALRILTSSDDLRADEVDAARDHSVGIAPLQYDTAGAVAHQVAALVGAGLAPNWVDDHLAAV ASARASAGEWSVNRAWRELLIPDSWRIAICGQAEELAPALAERGLEAVIVSPAEVLS >Mature_457_residues MKTCNERPLTSRPTVRPGSPWSFPQCLVETLPTGLTVVRVPMPGQRIVTMEIGLEAPLCAEPAGLEGLAGLVVRTADEST GPHPGAAFAEAMESIGASYDGSAGLAGSHVGVDVPVTRFDAAAELFVELLNTTSLVEEDIARQIDAARASLAQTSQRGSS LAEMAAARALWPVGSRSSLPTIGTLSSVEKLNAAAAREFWAAHWTISDAVLVVAGEGVEDLDLSIFKEWTTSGSPSQVAP LQPRLDGPRVILVDRPDAVQADVRIQQATVGRSHPGWAALKVACGALGGTFGSRLNQVLREDKGWSYGVGMSSRPLPDGG VATVAGSFRTEVGADAVAEALRILTSSDDLRADEVDAARDHSVGIAPLQYDTAGAVAHQVAALVGAGLAPNWVDDHLAAV ASARASAGEWSVNRAWRELLIPDSWRIAICGQAEELAPALAERGLEAVIVSPAEVLS
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47615; Mature: 47615
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCNERPLTSRPTVRPGSPWSFPQCLVETLPTGLTVVRVPMPGQRIVTMEIGLEAPLCA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCC EPAGLEGLAGLVVRTADESTGPHPGAAFAEAMESIGASYDGSAGLAGSHVGVDVPVTRFD CCCCCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH AAAELFVELLNTTSLVEEDIARQIDAARASLAQTSQRGSSLAEMAAARALWPVGSRSSLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TIGTLSSVEKLNAAAAREFWAAHWTISDAVLVVAGEGVEDLDLSIFKEWTTSGSPSQVAP CCHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC LQPRLDGPRVILVDRPDAVQADVRIQQATVGRSHPGWAALKVACGALGGTFGSRLNQVLR CCCCCCCCEEEEEECCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EDKGWSYGVGMSSRPLPDGGVATVAGSFRTEVGADAVAEALRILTSSDDLRADEVDAARD HCCCCEECCCCCCCCCCCCCCEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC HSVGIAPLQYDTAGAVAHQVAALVGAGLAPNWVDDHLAAVASARASAGEWSVNRAWRELL CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHC IPDSWRIAICGQAEELAPALAERGLEAVIVSPAEVLS CCCCCEEEECCCHHHHHHHHHHCCCEEEEECCHHHHC >Mature Secondary Structure MKTCNERPLTSRPTVRPGSPWSFPQCLVETLPTGLTVVRVPMPGQRIVTMEIGLEAPLCA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCC EPAGLEGLAGLVVRTADESTGPHPGAAFAEAMESIGASYDGSAGLAGSHVGVDVPVTRFD CCCCCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH AAAELFVELLNTTSLVEEDIARQIDAARASLAQTSQRGSSLAEMAAARALWPVGSRSSLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TIGTLSSVEKLNAAAAREFWAAHWTISDAVLVVAGEGVEDLDLSIFKEWTTSGSPSQVAP CCHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC LQPRLDGPRVILVDRPDAVQADVRIQQATVGRSHPGWAALKVACGALGGTFGSRLNQVLR CCCCCCCCEEEEEECCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EDKGWSYGVGMSSRPLPDGGVATVAGSFRTEVGADAVAEALRILTSSDDLRADEVDAARD HCCCCEECCCCCCCCCCCCCCEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC HSVGIAPLQYDTAGAVAHQVAALVGAGLAPNWVDDHLAAVASARASAGEWSVNRAWRELL CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHC IPDSWRIAICGQAEELAPALAERGLEAVIVSPAEVLS CCCCCEEEECCCHHHHHHHHHHCCCEEEEECCHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA