Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50841604

Identifier: 50841604

GI number: 50841604

Start: 135938

End: 136897

Strand: Reverse

Name: 50841604

Synonym: PPA0113

Alternate gene names: NA

Gene position: 136897-135938 (Counterclockwise)

Preceding gene: 50841613

Following gene: 50841600

Centisome position: 5.35

GC content: 62.6

Gene sequence:

>960_bases
ATGAGGGAAAACTTTGAACTAGAGCTGCGCAGCAACGGCGGGGTGGCGCGCATTGTCCGTGACAGCCCATTGCGAGGCCA
GGCTGACCGGTCCGTCGCCCGGGGCGATACGGTACGCATCCTGCCGGGAGTGGTGGCCGCCACCGGCGCTGCCCGCCACG
TCACTACGATGATCCAAGCACTGAAGTTGTGGCACCGCGGTGCGACGCTGGTCGGCATGGCCGCCTTGGTGTTGCTCGGA
TTGAAGAATCCGGTCACTCAGCGCCGCTGGGACTACACCGGCATCCAGGCCATCGAGGCGTTCTCGCCCACTCGCCGTCT
GAGGCGACCCCGTATCTGGGTGCATCGCTGGCACGTGCCCCACCATTTCACCATCGAAGAAGAAGGAATACGAGTCGCGA
TCCCGGAGGTATCGGTGATCATCCTGGCAATCCAGGGACAGTGGGACTGGGTGTGCCAGGCTCTGCGCCAACGCCTAGTG
ACCCCGGCCTCATGCCGGGCGGTCCGTAAAGCCCTCACCGGCCGGTATTCGAAGGCCGAAGTCGACCGTGCGCTAGCCGA
CATCGACCTAAATCCTTGGTCGATCCCGGAGCTGGAATTAGCACGAATCCTACGGGCAACCGGGATCACTGGTCACAAGC
CGAACCACCAAGTGTGGGTTGGTGAGGGGAATTATCGCTATGTCCTGGATCAAGCGTTCCAGGCTGAGATGCTGGGCGTG
GAAATGGAAGGCCGCTCGGTCCACGGTACCCCGGAAGGGTACGAGGCGATGATGGTGCGTTCGGCCCATCTGGAGCAGGC
CGGGTGGAGGATCCTGCACACCACCCCGACGATGCTGCGGCGCGATCCGAAGTTCGTGCTGGACTGGATCATCAATCACT
TGCACAAACGCCACCGCCCCAAGACCACGCTCACCAACCAGGTCCTGCGCCAGATCATGAATAGCGCCGTACCGGCGTAA

Upstream 100 bases:

>100_bases
GTGACGACTTATCCACAGCCAGTACGGCTGATCTGGGCCGGGTTGTCCACAGGTTCAAAAAACGTGGTGCATCCGCGGGC
CTGTGTCGATAACTGTGGAC

Downstream 100 bases:

>100_bases
ACCTTGCTGACTTCTCTAGCTAGACGGCAGGTGATTGTGTCCGGTTGTGGAAATCAGGGTTACGAACCCACGGTCTGCAA
CCCCACCAGGCATCCCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRENFELELRSNGGVARIVRDSPLRGQADRSVARGDTVRILPGVVAATGAARHVTTMIQALKLWHRGATLVGMAALVLLG
LKNPVTQRRWDYTGIQAIEAFSPTRRLRRPRIWVHRWHVPHHFTIEEEGIRVAIPEVSVIILAIQGQWDWVCQALRQRLV
TPASCRAVRKALTGRYSKAEVDRALADIDLNPWSIPELELARILRATGITGHKPNHQVWVGEGNYRYVLDQAFQAEMLGV
EMEGRSVHGTPEGYEAMMVRSAHLEQAGWRILHTTPTMLRRDPKFVLDWIINHLHKRHRPKTTLTNQVLRQIMNSAVPA

Sequences:

>Translated_319_residues
MRENFELELRSNGGVARIVRDSPLRGQADRSVARGDTVRILPGVVAATGAARHVTTMIQALKLWHRGATLVGMAALVLLG
LKNPVTQRRWDYTGIQAIEAFSPTRRLRRPRIWVHRWHVPHHFTIEEEGIRVAIPEVSVIILAIQGQWDWVCQALRQRLV
TPASCRAVRKALTGRYSKAEVDRALADIDLNPWSIPELELARILRATGITGHKPNHQVWVGEGNYRYVLDQAFQAEMLGV
EMEGRSVHGTPEGYEAMMVRSAHLEQAGWRILHTTPTMLRRDPKFVLDWIINHLHKRHRPKTTLTNQVLRQIMNSAVPA
>Mature_319_residues
MRENFELELRSNGGVARIVRDSPLRGQADRSVARGDTVRILPGVVAATGAARHVTTMIQALKLWHRGATLVGMAALVLLG
LKNPVTQRRWDYTGIQAIEAFSPTRRLRRPRIWVHRWHVPHHFTIEEEGIRVAIPEVSVIILAIQGQWDWVCQALRQRLV
TPASCRAVRKALTGRYSKAEVDRALADIDLNPWSIPELELARILRATGITGHKPNHQVWVGEGNYRYVLDQAFQAEMLGV
EMEGRSVHGTPEGYEAMMVRSAHLEQAGWRILHTTPTMLRRDPKFVLDWIINHLHKRHRPKTTLTNQVLRQIMNSAVPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36225; Mature: 36225

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRENFELELRSNGGVARIVRDSPLRGQADRSVARGDTVRILPGVVAATGAARHVTTMIQA
CCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCEEEECCHHHHHCCHHHHHHHHHHH
LKLWHRGATLVGMAALVLLGLKNPVTQRRWDYTGIQAIEAFSPTRRLRRPRIWVHRWHVP
HHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCHHHHHCCCEEEEEEECCC
HHFTIEEEGIRVAIPEVSVIILAIQGQWDWVCQALRQRLVTPASCRAVRKALTGRYSKAE
EEEEEECCCCEEEECCEEEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
VDRALADIDLNPWSIPELELARILRATGITGHKPNHQVWVGEGNYRYVLDQAFQAEMLGV
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHEE
EMEGRSVHGTPEGYEAMMVRSAHLEQAGWRILHTTPTMLRRDPKFVLDWIINHLHKRHRP
EECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHCCHHHHHHHHHHHHHHHCCC
KTTLTNQVLRQIMNSAVPA
CHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRENFELELRSNGGVARIVRDSPLRGQADRSVARGDTVRILPGVVAATGAARHVTTMIQA
CCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHCCCEEEECCHHHHHCCHHHHHHHHHHH
LKLWHRGATLVGMAALVLLGLKNPVTQRRWDYTGIQAIEAFSPTRRLRRPRIWVHRWHVP
HHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCHHHHHCCCEEEEEEECCC
HHFTIEEEGIRVAIPEVSVIILAIQGQWDWVCQALRQRLVTPASCRAVRKALTGRYSKAE
EEEEEECCCCEEEECCEEEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
VDRALADIDLNPWSIPELELARILRATGITGHKPNHQVWVGEGNYRYVLDQAFQAEMLGV
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHEE
EMEGRSVHGTPEGYEAMMVRSAHLEQAGWRILHTTPTMLRRDPKFVLDWIINHLHKRHRP
EECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHCCHHHHHHHHHHHHHHHCCC
KTTLTNQVLRQIMNSAVPA
CHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA