Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is lon [H]
Identifier: 50365222
GI number: 50365222
Start: 472161
End: 474524
Strand: Reverse
Name: lon [H]
Synonym: Mfl404
Alternate gene names: 50365222
Gene position: 474524-472161 (Counterclockwise)
Preceding gene: 50365223
Following gene: 50365221
Centisome position: 59.82
GC content: 28.81
Gene sequence:
>2364_bases ATGAGTAAAAAAATAAAACTACCTATTTTCCAAATAAGAGGTTCATTTATTGTTCCTGGAATTAAAGAGAATTTAGAAGT TGGAAGAAAAAACACATTAGCGAGCGTTAATTATGCGATTAAAAATTCAAATAATCAAATGATCGCAATACCACAGATTG ATGCATCTGTTGAAAAACCTGAATTTTCAGATTTACATGAATTTGGAATTTTAATTGATTTTGAAGTAATCAAAGAATGA AAAGATAATTCATTAACTATTAGCACAAACCCTATTCAAAGATGTAAAGTAATTAGCTTTTTTGAAAATGAAGATCAAGT GCCATATGCGGAAGTTGAATTAATTGAATCAATTAATGATTTTAGTGATGAAGAGTTAAAAGAATTAATTGAAAAAATCT CTGATGCTATCAAAACTAAAGCTAGTTTAGTAACAAAACAAATTAAACAGTTAATATCAGGTGAATCTGATGATTTAAGC TTAGCTTTTGATTCAATTATGTTTAAACTGGCTCCATCAAAAATATTGACAAATCCAGAATACATAACATCTCCATCATT AAAAACAAGATGATCAATTATTGAAAAAATAATTTTTGCTGAAGATGGAATCATAACAAGAAATGCAGAATCAATTGATG CAGCAAGACAAAAGAATGAAATTGAACAAGAACTAAACCATAAATTAAAAGAAAAAATGGATAAACAACAAAAAGAATAT TATCTAAGAGAAAAAATGAGAATTATCAAAGATGAATTAGAAGATGAAGATGATTCTGATGACAGTTCATTAGAAAAATA TAAAGAACGTTTAGCTAAAGAACCTTTCCCTGAAGAAGTCAAAAGAAAAATTATGGCTTCTATCAAAAGAGTTGAAGCAC TTCAATCAGGAACTCCTGAATGAAATACTGAGAAAAATTACATTGATTGAATGATGAGTATTCCTTGATGAGAAGAAACT GAAGACTTAACTGATTTAAAATATGCTAAAAAAATTTTAGACAAACATCATTATGGTATGAAAAAAGTTAAAGAAAGAAT TATTGAGTACTTAGCTGTTAAAACTAAAACAAAATCACTAAAAGCACCAATTATTACATTAGTTGGTCCCCCAGGTGTAG GTAAAACAAGTTTAGCAAAATCAATTGCAGAAGCAGTTGGAAAAAACTTTGTTAAAGTAAGTTTAGGTGGAGTTAAAGAT GAATCAGAAATTCGTGGACATAGAAAAACTTATGTTGGTTCAATGCCAGGAAGAATTATTCAAACAATGAAAAGAGCAAA AGTAAAAAACCCATTATTCTTGCTTGATGAAATTGATAAAATGGCATCTGATCACAGAGGTGATCCAGCAAGTGCAATGT TAGAGGTTCTTGACCCAGAACAAAACAAAGAGTTTTCAGATCATTATATTGAAGAACCATATGATCTAAGCCAAGTTATG TTTATAGCAACTGCTAACTATCCTGAAGATATTCCTGAAGCCTTATATGACCGTATGGAAATCATAAATTTATCTAGCTA TACTGAAATTGAAAAAGTTAAGATAGCACAAGATTATTTAGTTCCAAAAGCAATAGAACAACATGAATTAACTTCAGAAG AAATATCATTTACTGAAGGTGCAATTAATGAAATTATTAAATATTACACTAGAGAAGCTGGTGTGCGTCAATTAGAAAGA CATATTAATTCTATTATTAGAAAGTATATTGTTAAAAATCTAAATGGTGAAATGGATAAAATTGTTATTGATGAAAAACA AGTAAATGATTTATTAGGTAAAAGAATTTTTGATCACACTGAAAAACAAGAAGAATCTCAAATTGGTGTGGTTACAGGTT TAGCATATACACAATTTGGTGGAGATATTTTACCAATTGAAGTAAGTTTATACCCTGGTAAAGGAAATTTAATTCTTACA GGTAAACTTGGTGAAGTTATGAAAGAATCTGCAACAATTGCGTTAACTTATGTTAAATCAAACTTTGAAAAATTTGGAGT AGATAAAAAAGTATTTGAAGAAAATGATATTCATGTTCACGTTCCTGAAGGAGCTGTTCCAAAAGATGGACCAAGTGCTG GTATCACAATTACAACTGCTTTAATTTCTGCACTTTCAGATAAACCAGTTTCAAAAGAAATTGGAATGACTGGTGAAATC ACACTAAGAGGAAATGTATTGCCAATTGGTGGATTAAGAGAAAAATCAATTTCTGCTTCAAGAAGTGGATTGAAAACAAT CATTATTCCAAAGAAAAATGAAAGAGACTTAGACGAAATTCCAGATGAAGTAAAAGCAAAACTAAAAATTATACCTGCTG AAAAATATGAAGAGGTATTTGCAATAGTTTTTAAAACAAAATAA
Upstream 100 bases:
>100_bases AAAACAAACCTGATAAAGGTTTTTTTATTTTTAGCACTCTACTATTGTAATTGCTAAACAATATGATAATATATATTTAA CCACATAGGAGGTTAACAAA
Downstream 100 bases:
>100_bases GAGTAAAATAATAACTAGTAAAAACTAGTTATTTTTTATTAAGGAGGAATTATGAATACACCATTAGCATATTTATTAAG ACCAAAGACAACATCTGAAA
Product: class III heat shock DNA-binding ATP dependent Lon protease
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 787; Mature: 786
Protein sequence:
>787_residues MSKKIKLPIFQIRGSFIVPGIKENLEVGRKNTLASVNYAIKNSNNQMIAIPQIDASVEKPEFSDLHEFGILIDFEVIKEW KDNSLTISTNPIQRCKVISFFENEDQVPYAEVELIESINDFSDEELKELIEKISDAIKTKASLVTKQIKQLISGESDDLS LAFDSIMFKLAPSKILTNPEYITSPSLKTRWSIIEKIIFAEDGIITRNAESIDAARQKNEIEQELNHKLKEKMDKQQKEY YLREKMRIIKDELEDEDDSDDSSLEKYKERLAKEPFPEEVKRKIMASIKRVEALQSGTPEWNTEKNYIDWMMSIPWWEET EDLTDLKYAKKILDKHHYGMKKVKERIIEYLAVKTKTKSLKAPIITLVGPPGVGKTSLAKSIAEAVGKNFVKVSLGGVKD ESEIRGHRKTYVGSMPGRIIQTMKRAKVKNPLFLLDEIDKMASDHRGDPASAMLEVLDPEQNKEFSDHYIEEPYDLSQVM FIATANYPEDIPEALYDRMEIINLSSYTEIEKVKIAQDYLVPKAIEQHELTSEEISFTEGAINEIIKYYTREAGVRQLER HINSIIRKYIVKNLNGEMDKIVIDEKQVNDLLGKRIFDHTEKQEESQIGVVTGLAYTQFGGDILPIEVSLYPGKGNLILT GKLGEVMKESATIALTYVKSNFEKFGVDKKVFEENDIHVHVPEGAVPKDGPSAGITITTALISALSDKPVSKEIGMTGEI TLRGNVLPIGGLREKSISASRSGLKTIIIPKKNERDLDEIPDEVKAKLKIIPAEKYEEVFAIVFKTK
Sequences:
>Translated_787_residues MSKKIKLPIFQIRGSFIVPGIKENLEVGRKNTLASVNYAIKNSNNQMIAIPQIDASVEKPEFSDLHEFGILIDFEVIKE* KDNSLTISTNPIQRCKVISFFENEDQVPYAEVELIESINDFSDEELKELIEKISDAIKTKASLVTKQIKQLISGESDDLS LAFDSIMFKLAPSKILTNPEYITSPSLKTR*SIIEKIIFAEDGIITRNAESIDAARQKNEIEQELNHKLKEKMDKQQKEY YLREKMRIIKDELEDEDDSDDSSLEKYKERLAKEPFPEEVKRKIMASIKRVEALQSGTPE*NTEKNYID*MMSIP**EET EDLTDLKYAKKILDKHHYGMKKVKERIIEYLAVKTKTKSLKAPIITLVGPPGVGKTSLAKSIAEAVGKNFVKVSLGGVKD ESEIRGHRKTYVGSMPGRIIQTMKRAKVKNPLFLLDEIDKMASDHRGDPASAMLEVLDPEQNKEFSDHYIEEPYDLSQVM FIATANYPEDIPEALYDRMEIINLSSYTEIEKVKIAQDYLVPKAIEQHELTSEEISFTEGAINEIIKYYTREAGVRQLER HINSIIRKYIVKNLNGEMDKIVIDEKQVNDLLGKRIFDHTEKQEESQIGVVTGLAYTQFGGDILPIEVSLYPGKGNLILT GKLGEVMKESATIALTYVKSNFEKFGVDKKVFEENDIHVHVPEGAVPKDGPSAGITITTALISALSDKPVSKEIGMTGEI TLRGNVLPIGGLREKSISASRSGLKTIIIPKKNERDLDEIPDEVKAKLKIIPAEKYEEVFAIVFKTK >Mature_786_residues SKKIKLPIFQIRGSFIVPGIKENLEVGRKNTLASVNYAIKNSNNQMIAIPQIDASVEKPEFSDLHEFGILIDFEVIKE*K DNSLTISTNPIQRCKVISFFENEDQVPYAEVELIESINDFSDEELKELIEKISDAIKTKASLVTKQIKQLISGESDDLSL AFDSIMFKLAPSKILTNPEYITSPSLKTR*SIIEKIIFAEDGIITRNAESIDAARQKNEIEQELNHKLKEKMDKQQKEYY LREKMRIIKDELEDEDDSDDSSLEKYKERLAKEPFPEEVKRKIMASIKRVEALQSGTPE*NTEKNYID*MMSIP**EETE DLTDLKYAKKILDKHHYGMKKVKERIIEYLAVKTKTKSLKAPIITLVGPPGVGKTSLAKSIAEAVGKNFVKVSLGGVKDE SEIRGHRKTYVGSMPGRIIQTMKRAKVKNPLFLLDEIDKMASDHRGDPASAMLEVLDPEQNKEFSDHYIEEPYDLSQVMF IATANYPEDIPEALYDRMEIINLSSYTEIEKVKIAQDYLVPKAIEQHELTSEEISFTEGAINEIIKYYTREAGVRQLERH INSIIRKYIVKNLNGEMDKIVIDEKQVNDLLGKRIFDHTEKQEESQIGVVTGLAYTQFGGDILPIEVSLYPGKGNLILTG KLGEVMKESATIALTYVKSNFEKFGVDKKVFEENDIHVHVPEGAVPKDGPSAGITITTALISALSDKPVSKEIGMTGEIT LRGNVLPIGGLREKSISASRSGLKTIIIPKKNERDLDEIPDEVKAKLKIIPAEKYEEVFAIVFKTK
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=554, Percent_Identity=44.4043321299639, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI21396489, Length=576, Percent_Identity=41.6666666666667, Blast_Score=473, Evalue=1e-133, Organism=Escherichia coli, GI1786643, Length=787, Percent_Identity=43.0749682337992, Blast_Score=606, Evalue=1e-174, Organism=Caenorhabditis elegans, GI17505831, Length=609, Percent_Identity=39.9014778325123, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17556486, Length=535, Percent_Identity=40.3738317757009, Blast_Score=426, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319449, Length=626, Percent_Identity=39.9361022364217, Blast_Score=451, Evalue=1e-127, Organism=Drosophila melanogaster, GI24666867, Length=578, Percent_Identity=43.598615916955, Blast_Score=500, Evalue=1e-141, Organism=Drosophila melanogaster, GI221513036, Length=578, Percent_Identity=43.598615916955, Blast_Score=499, Evalue=1e-141,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 88058; Mature: 87927
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIKLPIFQIRGSFIVPGIKENLEVGRKNTLASVNYAIKNSNNQMIAIPQIDASVEKP CCCCCCCCCEEECCCEECCCCHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC EFSDLHEFGILIDFEVIKEKDNSLTISTNPIQRCKVISFFENEDQVPYAEVELIESINDF CHHHHHHHCCEEEEHHHHCCCCEEEEECCCHHHHEEEEEECCCCCCCHHHHHHHHHHCCC SDEELKELIEKISDAIKTKASLVTKQIKQLISGESDDLSLAFDSIMFKLAPSKILTNPEY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCCC ITSPSLKTRSIIEKIIFAEDGIITRNAESIDAARQKNEIEQELNHKLKEKMDKQQKEYYL CCCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKMRIIKDELEDEDDSDDSSLEKYKERLAKEPFPEEVKRKIMASIKRVEALQSGTPENT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC EKNYIDMMSIPEETEDLTDLKYAKKILDKHHYGMKKVKERIIEYLAVKTKTKSLKAPIIT CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE LVGPPGVGKTSLAKSIAEAVGKNFVKVSLGGVKDESEIRGHRKTYVGSMPGRIIQTMKRA EECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCHHHHHCCCCCHHHHHHHHHH KVKNPLFLLDEIDKMASDHRGDPASAMLEVLDPEQNKEFSDHYIEEPYDLSQVMFIATAN HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEECC YPEDIPEALYDRMEIINLSSYTEIEKVKIAQDYLVPKAIEQHELTSEEISFTEGAINEII CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH KYYTREAGVRQLERHINSIIRKYIVKNLNGEMDKIVIDEKQVNDLLGKRIFDHTEKQEES HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHC QIGVVTGLAYTQFGGDILPIEVSLYPGKGNLILTGKLGEVMKESATIALTYVKSNFEKFG CCEEEEEHHHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHCCCEEEEEEEHHHHHHHC VDKKVFEENDIHVHVPEGAVPKDGPSAGITITTALISALSDKPVSKEIGMTGEITLRGNV CCHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCE LPIGGLREKSISASRSGLKTIIIPKKNERDLDEIPDEVKAKLKIIPAEKYEEVFAIVFKT EECCCCCHHHHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHEEEECHHHHHHHHHEEEEC K C >Mature Secondary Structure SKKIKLPIFQIRGSFIVPGIKENLEVGRKNTLASVNYAIKNSNNQMIAIPQIDASVEKP CCCCCCCCEEECCCEECCCCHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC EFSDLHEFGILIDFEVIKEKDNSLTISTNPIQRCKVISFFENEDQVPYAEVELIESINDF CHHHHHHHCCEEEEHHHHCCCCEEEEECCCHHHHEEEEEECCCCCCCHHHHHHHHHHCCC SDEELKELIEKISDAIKTKASLVTKQIKQLISGESDDLSLAFDSIMFKLAPSKILTNPEY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCCC ITSPSLKTRSIIEKIIFAEDGIITRNAESIDAARQKNEIEQELNHKLKEKMDKQQKEYYL CCCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKMRIIKDELEDEDDSDDSSLEKYKERLAKEPFPEEVKRKIMASIKRVEALQSGTPENT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC EKNYIDMMSIPEETEDLTDLKYAKKILDKHHYGMKKVKERIIEYLAVKTKTKSLKAPIIT CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE LVGPPGVGKTSLAKSIAEAVGKNFVKVSLGGVKDESEIRGHRKTYVGSMPGRIIQTMKRA EECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCHHHHHCCCCCHHHHHHHHHH KVKNPLFLLDEIDKMASDHRGDPASAMLEVLDPEQNKEFSDHYIEEPYDLSQVMFIATAN HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEECC YPEDIPEALYDRMEIINLSSYTEIEKVKIAQDYLVPKAIEQHELTSEEISFTEGAINEII CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHH KYYTREAGVRQLERHINSIIRKYIVKNLNGEMDKIVIDEKQVNDLLGKRIFDHTEKQEES HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHC QIGVVTGLAYTQFGGDILPIEVSLYPGKGNLILTGKLGEVMKESATIALTYVKSNFEKFG CCEEEEEHHHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHCCCEEEEEEEHHHHHHHC VDKKVFEENDIHVHVPEGAVPKDGPSAGITITTALISALSDKPVSKEIGMTGEITLRGNV CCHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCE LPIGGLREKSISASRSGLKTIIIPKKNERDLDEIPDEVKAKLKIIPAEKYEEVFAIVFKT EECCCCCHHHHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHEEEECHHHHHHHHHEEEEC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA