Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is sau3AIM [H]
Identifier: 50365124
GI number: 50365124
Start: 354847
End: 356061
Strand: Direct
Name: sau3AIM [H]
Synonym: Mfl308
Alternate gene names: 50365124
Gene position: 354847-356061 (Clockwise)
Preceding gene: 50365122
Following gene: 50365125
Centisome position: 44.73
GC content: 26.58
Gene sequence:
>1215_bases ATGTCTGATAAAATCAAAGTCGTTGAATTATTTGCAGGAGTAGGTGGATTTTCTCTTGCATTGAAGAAATCAAAAGGTAA TTATGAAGTTATTTTTTCAAACCAGTGAGAACCTTCAACTAAAAATCAATTTGCTTTTAATGCACTTAATAAAAATTTTA AAAAGCACATTTTATCTAATGAAGATATTCAGTTTGCAAAAGAAAAATTACCAAACGATTTTGATTTACTTGTTGGAGGA TTTCCTTGTCAAGATTATTCGGTAGCAACTACAAACTCAAAAGGTATTGAAGGAAAAAAAGGTGTGCTTTGATGAGAAAT TTCTTGAATTTTAGAAAAGCATAAACCAAATTTTGTTTTTCTTGAAAACGTGGATAGATTATTAAAGTCTCCCTCAAATA AAAGAGGAAGAGACTTTGCAATAATACTTAAAGATCTTGACGAAAAAGGTTATAACGTCGAGTGAATGAATATAAATGCT GGTGATTATGGCTATGTTCAAAGAAGAAGAAGAGTATTTATTCTTGCTTGAAGAAAAGAAAAATTAAATATTCAGAAGGA ATTAAATATTTCAGATGCATTTCATAAAGGAATATTCAGAAAAGGTTTTAAAGTTAAAAAGTTTATATTAGAAAAAGAAA TTGACTTAAATATTTTTTCAGATAAAGTTGATGTTACTGAAAATTATAATTATGGAAAATTTTTAAATTTTGGAGTAATG ATAGACGGAAAAATAATTTCAGGAGATTTCGTTCCACTTTTTAAAGGAAAACAAAAAAAATTAAAAGATATATTAGAAGA TAAAGTTGATGATTCATATTTTTTAACTGAAGAACAAATACAAAAAATAAGTATTTTAAAAGATAGCAAAAAAATTCCTA GAACAAAACCTAATGGTGAAAAATATTTTTACTCTGAAGGTAAGATGTCAATACTTGAAAATATAAATATGCCATCAAGA ACAATGTTGACATCTGAAGGAACAATAAATAGAGCATCGCATTTTATTGAAGATACTAATTCAAAAGGAATTAAAGGTAT TAGAAGGATAACACCATTAGAAGCTGAAAGAATAAATGGTTTTACCGATAATTGGACTTCTGACGTAATGACAGAAAGAC AAAGATATTTTTGTATGGGAAATGCTCTTGTGGTTCCATTAGTAGCAAAAATAGCTGATTGTTTAAGTGAAAAAAATAAC GAAATAAAAAAATAA
Upstream 100 bases:
>100_bases ATATCATCTATTGTCTTATTCATATTATATTTTCTCTTCCTATTTTAGTGTATAATTTATTAATGTTATTATAAAATATT TTATGAAAGAGTGTGAAATA
Downstream 100 bases:
>100_bases GGAGATTATTATGGCAAAAGAAGTAAAATATGATGAATCGGCCATTCAGGTCCTTGAAGGTTTAGAAGCTGTTAGAAAAC GTCCAGGGATGTATATTGGT
Product: modification methylase Sau3AI (GATC cytosine-specific methyltransferase)
Products: NA
Alternate protein names: M.Sau3AI; Cytosine-specific methyltransferase Sau3AI [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSDKIKVVELFAGVGGFSLALKKSKGNYEVIFSNQWEPSTKNQFAFNALNKNFKKHILSNEDIQFAKEKLPNDFDLLVGG FPCQDYSVATTNSKGIEGKKGVLWWEISWILEKHKPNFVFLENVDRLLKSPSNKRGRDFAIILKDLDEKGYNVEWMNINA GDYGYVQRRRRVFILAWRKEKLNIQKELNISDAFHKGIFRKGFKVKKFILEKEIDLNIFSDKVDVTENYNYGKFLNFGVM IDGKIISGDFVPLFKGKQKKLKDILEDKVDDSYFLTEEQIQKISILKDSKKIPRTKPNGEKYFYSEGKMSILENINMPSR TMLTSEGTINRASHFIEDTNSKGIKGIRRITPLEAERINGFTDNWTSDVMTERQRYFCMGNALVVPLVAKIADCLSEKNN EIKK
Sequences:
>Translated_404_residues MSDKIKVVELFAGVGGFSLALKKSKGNYEVIFSNQ*EPSTKNQFAFNALNKNFKKHILSNEDIQFAKEKLPNDFDLLVGG FPCQDYSVATTNSKGIEGKKGVL**EIS*ILEKHKPNFVFLENVDRLLKSPSNKRGRDFAIILKDLDEKGYNVE*MNINA GDYGYVQRRRRVFILA*RKEKLNIQKELNISDAFHKGIFRKGFKVKKFILEKEIDLNIFSDKVDVTENYNYGKFLNFGVM IDGKIISGDFVPLFKGKQKKLKDILEDKVDDSYFLTEEQIQKISILKDSKKIPRTKPNGEKYFYSEGKMSILENINMPSR TMLTSEGTINRASHFIEDTNSKGIKGIRRITPLEAERINGFTDNWTSDVMTERQRYFCMGNALVVPLVAKIADCLSEKNN EIKK >Mature_403_residues SDKIKVVELFAGVGGFSLALKKSKGNYEVIFSNQ*EPSTKNQFAFNALNKNFKKHILSNEDIQFAKEKLPNDFDLLVGGF PCQDYSVATTNSKGIEGKKGVL**EIS*ILEKHKPNFVFLENVDRLLKSPSNKRGRDFAIILKDLDEKGYNVE*MNINAG DYGYVQRRRRVFILA*RKEKLNIQKELNISDAFHKGIFRKGFKVKKFILEKEIDLNIFSDKVDVTENYNYGKFLNFGVMI DGKIISGDFVPLFKGKQKKLKDILEDKVDDSYFLTEEQIQKISILKDSKKIPRTKPNGEKYFYSEGKMSILENINMPSRT MLTSEGTINRASHFIEDTNSKGIKGIRRITPLEAERINGFTDNWTSDVMTERQRYFCMGNALVVPLVAKIADCLSEKNNE IKK
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on C-4 on both strands and protects the DNA from cleavage by the Sau3AI endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788271, Length=217, Percent_Identity=24.4239631336406, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018117 - InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 45435; Mature: 45304
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00094 C5_MTASE_1 ; PS00095 C5_MTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKIKVVELFAGVGGFSLALKKSKGNYEVIFSNQEPSTKNQFAFNALNKNFKKHILSNE CCCCEEEEEEHHCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC DIQFAKEKLPNDFDLLVGGFPCQDYSVATTNSKGIEGKKGVLEISILEKHKPNFVFLENV CHHHHHHHCCCCHHEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEHHHH DRLLKSPSNKRGRDFAIILKDLDEKGYNVEMNINAGDYGYVQRRRRVFILARKEKLNIQK HHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCEEEEEEECCCCCCHH ELNISDAFHKGIFRKGFKVKKFILEKEIDLNIFSDKVDVTENYNYGKFLNFGVMIDGKII HCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEEEECEEE SGDFVPLFKGKQKKLKDILEDKVDDSYFLTEEQIQKISILKDSKKIPRTKPNGEKYFYSE CCCCEECCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GKMSILENINMPSRTMLTSEGTINRASHFIEDTNSKGIKGIRRITPLEAERINGFTDNWT CCHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCCCCCH SDVMTERQRYFCMGNALVVPLVAKIADCLSEKNNEIKK HHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDKIKVVELFAGVGGFSLALKKSKGNYEVIFSNQEPSTKNQFAFNALNKNFKKHILSNE CCCEEEEEEHHCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC DIQFAKEKLPNDFDLLVGGFPCQDYSVATTNSKGIEGKKGVLEISILEKHKPNFVFLENV CHHHHHHHCCCCHHEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEHHHH DRLLKSPSNKRGRDFAIILKDLDEKGYNVEMNINAGDYGYVQRRRRVFILARKEKLNIQK HHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCEEEEEEECCCCCCHH ELNISDAFHKGIFRKGFKVKKFILEKEIDLNIFSDKVDVTENYNYGKFLNFGVMIDGKII HCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEEEECEEE SGDFVPLFKGKQKKLKDILEDKVDDSYFLTEEQIQKISILKDSKKIPRTKPNGEKYFYSE CCCCEECCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GKMSILENINMPSRTMLTSEGTINRASHFIEDTNSKGIKGIRRITPLEAERINGFTDNWT CCHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCCCCCH SDVMTERQRYFCMGNALVVPLVAKIADCLSEKNNEIKK HHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2227451 [H]