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The map label for this gene is ybeY [C]

Identifier: 50365081

GI number: 50365081

Start: 304249

End: 304758

Strand: Direct

Name: ybeY [C]

Synonym: Mfl265

Alternate gene names: 50365081

Gene position: 304249-304758 (Clockwise)

Preceding gene: 50365080

Following gene: 50365082

Centisome position: 38.36

GC content: 22.75

Gene sequence:

>510_bases
ATGATAAGTATTGATTTTATAAATGAAACTGATTTAAAAGTAAAAGAATGAGAAGATTTAGCAAAACAAATAATTAATTC
AGGTTTTAAATATCTGAAATTAAAAAATAAAATAAATCTATCTATTACTTTTTTAGATAGTGAACCAGCTCAAAAAATAA
ATCAAGAATATAGAAATCATTCTTATATACCTGATGTAACATCATTTCCAATAGAAATGTCTCCACAAGAAATAAAAGCT
TTAGGATATCAAGAAATAGGAGATATCTTTATCTGTATTGAAGAAGCAGAAAGAAAAAGCATTAAATATGATCATTCTTT
GAAAGAAGAAATGGGATTTTTATTTACACATGGTTTTTTACACTTAATGGGTTATGATCATGAAACAAATGAAAAAGATG
AAGAAGAAATGTTTTTCATTCAAGATGAAATACTTAAAATAAATAAAATAAATTACACAATAAAATTCACAGAAGAAGAT
TATAAAGAAATAGAGGAAAAAGATGAATAA

Upstream 100 bases:

>100_bases
GATGAAATAAAGTCAATTTTAACTATCTTTACTGAATTAAGTGATGATAAATTTTTGATTTTGTCTTAAAATTAATATAT
TAAAGTAAAAAGGGATAAGA

Downstream 100 bases:

>100_bases
AATTAAATCGGGATTTATATCTATAGTTGGTAGACCAAACGTTGGTAAATCAACTTTATTAAATAAAATAATAGGGCATA
AAATTTCAATTGTTACAAAT

Product: putative metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MISIDFINETDLKVKEWEDLAKQIINSGFKYLKLKNKINLSITFLDSEPAQKINQEYRNHSYIPDVTSFPIEMSPQEIKA
LGYQEIGDIFICIEEAERKSIKYDHSLKEEMGFLFTHGFLHLMGYDHETNEKDEEEMFFIQDEILKINKINYTIKFTEED
YKEIEEKDE

Sequences:

>Translated_169_residues
MISIDFINETDLKVKE*EDLAKQIINSGFKYLKLKNKINLSITFLDSEPAQKINQEYRNHSYIPDVTSFPIEMSPQEIKA
LGYQEIGDIFICIEEAERKSIKYDHSLKEEMGFLFTHGFLHLMGYDHETNEKDEEEMFFIQDEILKINKINYTIKFTEED
YKEIEEKDE
>Mature_169_residues
MISIDFINETDLKVKE*EDLAKQIINSGFKYLKLKNKINLSITFLDSEPAQKINQEYRNHSYIPDVTSFPIEMSPQEIKA
LGYQEIGDIFICIEEAERKSIKYDHSLKEEMGFLFTHGFLHLMGYDHETNEKDEEEMFFIQDEILKINKINYTIKFTEED
YKEIEEKDE

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 19946; Mature: 19946

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIDFINETDLKVKEEDLAKQIINSGFKYLKLKNKINLSITFLDSEPAQKINQEYRNHS
CEEEEECCCCCCEECHHHHHHHHHHCCHHEEEECCEEEEEEEEECCCHHHHHHHHHHCCC
YIPDVTSFPIEMSPQEIKALGYQEIGDIFICIEEAERKSIKYDHSLKEEMGFLFTHGFLH
CCCCCCCCCCCCCHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
LMGYDHETNEKDEEEMFFIQDEILKINKINYTIKFTEEDYKEIEEKDE
HHCCCCCCCCCCCHHEEEEHHHHEEEEEEEEEEEECCHHHHHHHHCCC
>Mature Secondary Structure
MISIDFINETDLKVKEEDLAKQIINSGFKYLKLKNKINLSITFLDSEPAQKINQEYRNHS
CEEEEECCCCCCEECHHHHHHHHHHCCHHEEEECCEEEEEEEEECCCHHHHHHHHHHCCC
YIPDVTSFPIEMSPQEIKALGYQEIGDIFICIEEAERKSIKYDHSLKEEMGFLFTHGFLH
CCCCCCCCCCCCCHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
LMGYDHETNEKDEEEMFFIQDEILKINKINYTIKFTEEDYKEIEEKDE
HHCCCCCCCCCCCHHEEEEHHHHEEEEEEEEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA