Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ybfM [H]
Identifier: 49187885
GI number: 49187885
Start: 4778174
End: 4778788
Strand: Reverse
Name: ybfM [H]
Synonym: BAS4897
Alternate gene names: 49187885
Gene position: 4778788-4778174 (Counterclockwise)
Preceding gene: 49187891
Following gene: 49187883
Centisome position: 91.4
GC content: 34.96
Gene sequence:
>615_bases ATGGAATGGATTCATGAATTATTTCAGCAATACGGGTACTATGTTGTACTTGTCGGTTTGCTGTTAGAATATATCGCACT TCCGTTTCCGGGAGAGCCAACGTTAGCATATGCGGGATTTTTAGCACATAAAGGTGATTTAAGTTTACCGATTTTAATCA TTCTATCCTTTATTGGGACAAGTGTAGGAATGACGATTCAATACTTTTTAGGAAATAAATTAGGTATGCCCTTTATTCAA AAGTATGGGAAATACGTATTTTTAACACAAAGAAAAATCGACTTAACAAGAATGTGGTTTGATAAGTATGGATATTTCCT AATCTTTATCGGTTTCTTTATTCCTGGTGTACGTCACTTTACAGGATACTTTGCAGGAATTATTAACTTACCATTCCGCC GCTTTGCAATTACAATTTATTCAGGTGCTCTATTTTGGGTATCATTCTTCTTAATCGGTGGTTACTGGTTAGGTGGCAAT TTACATGATATTTTTGGAGCGCTAGAAGGTCATATCGGTAAAATCATTTTTGGAGTGATTGTGATTGTAGCAATTACGTT AGGAGTTCGTTTCCGTAAACAGTTAAAACGAGCATTATTACAAAACGCAAGTTAA
Upstream 100 bases:
>100_bases ACAAAAATGTAATAAAATGTAAGCTATTGTGATAGTTATTTCGACAATTTTTTTATACAATATTAGTAAGATGTTGCACG TGATTGAAAGGAGAGATGAC
Downstream 100 bases:
>100_bases GATGGAATCCATTCTATGTCAGAATTTAGGAAGGCAGTGCAAAAGCACTGCCTTTTTTATTTTATGTTCCAATCGATTTT TAACTTTCCTTTTGATTGAT
Product: dedA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILSFIGTSVGMTIQYFLGNKLGMPFIQ KYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFAITIYSGALFWVSFFLIGGYWLGGN LHDIFGALEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS
Sequences:
>Translated_204_residues MEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILSFIGTSVGMTIQYFLGNKLGMPFIQ KYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFAITIYSGALFWVSFFLIGGYWLGGN LHDIFGALEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS >Mature_204_residues MEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILSFIGTSVGMTIQYFLGNKLGMPFIQ KYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFAITIYSGALFWVSFFLIGGYWLGGN LHDIFGALEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dedA family [H]
Homologues:
Organism=Escherichia coli, GI1788656, Length=185, Percent_Identity=28.6486486486486, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015414 [H]
Pfam domain/function: PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 23276; Mature: 23276
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILSFIGT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH SVGMTIQYFLGNKLGMPFIQKYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHF HHHHHHHHHHCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGYFAGIINLPFRRFAITIYSGALFWVSFFLIGGYWLGGNLHDIFGALEGHIGKIIFGVI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VIVAITLGVRFRKQLKRALLQNAS HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILSFIGT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH SVGMTIQYFLGNKLGMPFIQKYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHF HHHHHHHHHHCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGYFAGIINLPFRRFAITIYSGALFWVSFFLIGGYWLGGNLHDIFGALEGHIGKIIFGVI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VIVAITLGVRFRKQLKRALLQNAS HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]