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The map label for this gene is ytqB [H]

Identifier: 49187638

GI number: 49187638

Start: 4542285

End: 4542857

Strand: Direct

Name: ytqB [H]

Synonym: BAS4647

Alternate gene names: 49187638

Gene position: 4542285-4542857 (Clockwise)

Preceding gene: 49187637

Following gene: 49187639

Centisome position: 86.87

GC content: 41.88

Gene sequence:

>573_bases
ATGAAATTAGAACGTGTATTACCGTTTGCTCGCTCGCTTCTGCAAACGGCTGTTAAAGAAGGCGATTATGCTGTAGATGC
AACTTTAGGAAACGGTCATGACACTTGCTTCCTAGCTGAAATCGTTGGAGATAGCGGAAAAGTATTTGGATTTGATATTC
AAAAAGAAGCAATTGAAAGCTCGACGACCCGTTTAAAAGAAAAAGAACTTTTCGAACGTACTGTTTTAGTTCACGATAGT
CACGATACACTGCTATCCGTATTACCAGAAGATGCAAAGGGAAAAGTAACAGGCGCAATCTTCAACTTAGGTTACCTTCC
AGGCGGAGACAAGCATATCGTTACAAAACCGAACTCAACAATTTCAGCGATCGAACAATTACTAGAAGTAATGGCACCTG
AAGGTATCATCGTCCTTGTCATTTACCACGGACACCCAGAAGGACAAGTAGAACGCGACGCTGTTCTCAAATTTGCCGAA
GAACTAGACCAAAAACAAGCACACGTACTGCGATACGGCTTCATTAACCAGCAAAATAACCCGCCATTTATTGTGGCGAT
TGAGAAACGATAA

Upstream 100 bases:

>100_bases
TGTGGAGCTTAAATAAATGGGAAGTATTAAATTCCATCGATGCAGAATTTGTGCGCCGCGGAAGCTGGCAAGGAAAATAT
GCAAATGAGGAGAAACAAAA

Downstream 100 bases:

>100_bases
TATATCAACGATTTCTTAATTATATCTATCGTAACTCGGGATATATCAACGATTTTTTCGATATATCGACGATTCGACAC
AACATATCGACTTATCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKLERVLPFARSLLQTAVKEGDYAVDATLGNGHDTCFLAEIVGDSGKVFGFDIQKEAIESSTTRLKEKELFERTVLVHDS
HDTLLSVLPEDAKGKVTGAIFNLGYLPGGDKHIVTKPNSTISAIEQLLEVMAPEGIIVLVIYHGHPEGQVERDAVLKFAE
ELDQKQAHVLRYGFINQQNNPPFIVAIEKR

Sequences:

>Translated_190_residues
MKLERVLPFARSLLQTAVKEGDYAVDATLGNGHDTCFLAEIVGDSGKVFGFDIQKEAIESSTTRLKEKELFERTVLVHDS
HDTLLSVLPEDAKGKVTGAIFNLGYLPGGDKHIVTKPNSTISAIEQLLEVMAPEGIIVLVIYHGHPEGQVERDAVLKFAE
ELDQKQAHVLRYGFINQQNNPPFIVAIEKR
>Mature_190_residues
MKLERVLPFARSLLQTAVKEGDYAVDATLGNGHDTCFLAEIVGDSGKVFGFDIQKEAIESSTTRLKEKELFERTVLVHDS
HDTLLSVLPEDAKGKVTGAIFNLGYLPGGDKHIVTKPNSTISAIEQLLEVMAPEGIIVLVIYHGHPEGQVERDAVLKFAE
ELDQKQAHVLRYGFINQQNNPPFIVAIEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 21006; Mature: 21006

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLERVLPFARSLLQTAVKEGDYAVDATLGNGHDTCFLAEIVGDSGKVFGFDIQKEAIES
CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEHHHHHHHH
STTRLKEKELFERTVLVHDSHDTLLSVLPEDAKGKVTGAIFNLGYLPGGDKHIVTKPNST
HHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCH
ISAIEQLLEVMAPEGIIVLVIYHGHPEGQVERDAVLKFAEELDQKQAHVLRYGFINQQNN
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPFIVAIEKR
CCEEEEEECC
>Mature Secondary Structure
MKLERVLPFARSLLQTAVKEGDYAVDATLGNGHDTCFLAEIVGDSGKVFGFDIQKEAIES
CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEHHHHHHHH
STTRLKEKELFERTVLVHDSHDTLLSVLPEDAKGKVTGAIFNLGYLPGGDKHIVTKPNST
HHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCH
ISAIEQLLEVMAPEGIIVLVIYHGHPEGQVERDAVLKFAEELDQKQAHVLRYGFINQQNN
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPFIVAIEKR
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]