Click here to switch to the map view.

The map label for this gene is ytqA [H]

Identifier: 49187637

GI number: 49187637

Start: 4541329

End: 4542288

Strand: Direct

Name: ytqA [H]

Synonym: BAS4646

Alternate gene names: 49187637

Gene position: 4541329-4542288 (Clockwise)

Preceding gene: 49187626

Following gene: 49187638

Centisome position: 86.85

GC content: 40.21

Gene sequence:

>960_bases
ATGAAGGTTCAAAACCCTTTTCCATATACGAACGACAATAAACGTTATCATACATGGAATTACCATTTACGAAATGAATT
TGGTGAAAAAATCTTTAAAGTTTCATTAGATGCTGGCTTCGACTGCCCGAACCGTGACGGTACAGTTGCTTATGGCGGTT
GTACATTTTGCAGTGCTGCTGGATCTGGTGACTTCGCTGGCGATCGCCGCGATGATGTTATAACGCAATATCATGAAATG
AAAGAAAAAATGCGCTCAAAGTGGAAAGACGGAAAATGTATCGCTTATTTCCAGGCGTACACAAATACACATGCACCACT
TGAAGTGTTAAAAGAAAAATTCGAACCGCTTCTAGCTGAAAAAGACGTTGTTGGTCTTTCTATCGCGACTCGCCCAGATT
GTTTACCGGACGATGTCGTTGCATATTTAGCGGACTTAAATAAACGCACATACCTTTGGGTTGAACTCGGACTACAAACT
GTTCATGAACGTACTGCAAACCTTATTAACCGCGCTCACGATTATCCGTCTTATGTGGAAGGTGTAAATAAATTACGCAA
ACATGGCATTCGAGTTTGCTCTCATATTATTAACGGTCTTCCCCTTGAAAATTACGACATGATGATGGAAACAGCTCGCG
AAGTAGCGAAGCTTGACATACAAGGAATTAAAATTCATTTACTTCATTTATTAAAAGGAACGCCAATGGTGAAACAATAT
GAAAAAGGACAACTCGAGTTCCTTTCTCTTGAGGATTACGTAAGTCTTGTTGTTGATCAACTTGAAATTATTCCAGAAGA
CGTAATTGTGCACCGCATCACAGGTGACGGTCCACCTGATTTAATGATCGGTCCAATGTGGAGCTTAAATAAATGGGAAG
TATTAAATTCCATCGATGCAGAATTTGTGCGCCGCGGAAGCTGGCAAGGAAAATATGCAAATGAGGAGAAACAAAAATGA

Upstream 100 bases:

>100_bases
CTTGCTTCAATTCCCCTTTAGTGTGTCCCTTCCATATGAACCTTATGAGTATGTTATAATGGATTTTGTTTCATTTTGAC
TCGGCTTAGGAGGGAAAGTA

Downstream 100 bases:

>100_bases
AATTAGAACGTGTATTACCGTTTGCTCGCTCGCTTCTGCAAACGGCTGTTAAAGAAGGCGATTATGCTGTAGATGCAACT
TTAGGAAACGGTCATGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDVITQYHEM
KEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQT
VHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLENYDMMMETAREVAKLDIQGIKIHLLHLLKGTPMVKQY
EKGQLEFLSLEDYVSLVVDQLEIIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQGKYANEEKQK

Sequences:

>Translated_319_residues
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDVITQYHEM
KEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQT
VHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLENYDMMMETAREVAKLDIQGIKIHLLHLLKGTPMVKQY
EKGQLEFLSLEDYVSLVVDQLEIIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQGKYANEEKQK
>Mature_319_residues
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDVITQYHEM
KEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQT
VHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLENYDMMMETAREVAKLDIQGIKIHLLHLLKGTPMVKQY
EKGQLEFLSLEDYVSLVVDQLEIIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQGKYANEEKQK

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=278, Percent_Identity=38.4892086330935, Blast_Score=227, Evalue=9e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36615; Mature: 36615

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCHHHCCCC
GSGDFAGDRRDDVITQYHEMKEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHC
KDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLINRAHDYPSYVE
CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
GVNKLRKHGIRVCSHIINGLPLENYDMMMETAREVAKLDIQGIKIHLLHLLKGTPMVKQY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHH
EKGQLEFLSLEDYVSLVVDQLEIIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDA
CCCCEEEECHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCEECCCCCCCHHHHHHHHHH
EFVRRGSWQGKYANEEKQK
HHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCHHHCCCC
GSGDFAGDRRDDVITQYHEMKEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHC
KDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLINRAHDYPSYVE
CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
GVNKLRKHGIRVCSHIINGLPLENYDMMMETAREVAKLDIQGIKIHLLHLLKGTPMVKQY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHH
EKGQLEFLSLEDYVSLVVDQLEIIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDA
CCCCEEEECHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCEECCCCCCCHHHHHHHHHH
EFVRRGSWQGKYANEEKQK
HHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]